G1502395


Basic Information

Item Value
gene id G1502395
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 88872438 ~ 88872830 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1717783
CTAGGTGGTAGTTAGCCCAGATCTGGGACTAGGCTAGGTGGTAGTTATCCCAGATCTGGGACTAGGCTAGGTAGTAGTTAGCCCAGATCTGGGACTAGGCTAGGTGGTAGTTAGCCCAGATCTGGGACTAGGCTAGGTGGTAGTTAGCCCAGATCTGGGACTAGGCTAGGTAGTAGTTAGCCCAGATCTGGGACTAGGCTAGGCGGTAGTTAGCCCGGATCTGGGACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1717783 True 228 lncRNA 0.54 2 88872438 88872830

Neighbor

gene id symbol gene type direction distance location
LOC118940112 NA coding upstream 204387 88667045 ~ 88668051 (+)
LOC118940163 NA coding upstream 254623 88606768 ~ 88617815 (+)
LOC118940508 NA coding upstream 435606 88435946 ~ 88436832 (+)
LOC118940509 NA coding upstream 436922 88434348 ~ 88435516 (+)
LOC110493294 LOC106566182 coding upstream 451212 88372078 ~ 88421226 (+)
cand2 LOC106566202 coding downstream 4954 88877784 ~ 88897509 (+)
ssuh2.1 LOC106566200 coding downstream 40066 88912896 ~ 88965638 (+)
LOC110494825 LOC106566214 coding downstream 93017 88965847 ~ 89103615 (+)
LOC110493303 LOC106566213 coding downstream 233317 89106147 ~ 89150807 (+)
LOC110493302 LOC106583746 coding downstream 289920 89162750 ~ 89524314 (+)
G1502365 NA non-coding upstream 80124 88790280 ~ 88792314 (+)
G1502358 NA non-coding upstream 94158 88775383 ~ 88778280 (+)
G1502349 NA non-coding upstream 104633 88767591 ~ 88767805 (+)
G1502346 NA non-coding upstream 107715 88764093 ~ 88764723 (+)
G1502328 NA non-coding upstream 149410 88722714 ~ 88723028 (+)
G1502408 LOC106583741 non-coding downstream 28354 88901184 ~ 88905941 (+)
G1502439 NA non-coding downstream 107830 88980660 ~ 88981430 (+)
G1502462 NA non-coding downstream 151126 89023956 ~ 89024485 (+)
G1502465 NA non-coding downstream 157273 89030103 ~ 89030533 (+)
G1502478 NA non-coding downstream 200270 89073100 ~ 89084957 (+)
G1502370 NA other upstream 63469 88806978 ~ 88808969 (+)
G1502352 NA other upstream 71798 88769870 ~ 88800640 (+)
LOC110494816 LOC106566192 other upstream 747564 88089634 ~ 88143474 (+)
LOC110494789 bloc1s1 other upstream 1385548 87415720 ~ 87486890 (+)
G1501148 NA other upstream 1703431 87168539 ~ 87169007 (+)
G1503119 NA other downstream 895727 89768557 ~ 89786154 (+)
G1503337 NA other downstream 1348715 90221545 ~ 90223659 (+)
LOC110504503 LOC106566236 other downstream 3412225 92282926 ~ 92317484 (+)
G1505894 NA other downstream 3446715 92319545 ~ 92320777 (+)

Expression


Co-expression Network