Gene
RNA
| Item | Value |
|---|---|
| gene id | G1502846 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 89130360 ~ 89131054 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1718371 | True | 214 | lncRNA | 0.46 | 2 | 89130360 | 89131054 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494825 | LOC106566214 | coding | upstream | 27969 | 88965847 ~ 89103615 (+) |
| ssuh2.1 | LOC106566200 | coding | upstream | 164722 | 88912896 ~ 88965638 (+) |
| cand2 | LOC106566202 | coding | upstream | 232851 | 88877784 ~ 88897509 (+) |
| LOC118940112 | NA | coding | upstream | 462309 | 88667045 ~ 88668051 (+) |
| LOC118940163 | NA | coding | upstream | 512545 | 88606768 ~ 88617815 (+) |
| LOC110493302 | LOC106583746 | coding | downstream | 31696 | 89162750 ~ 89524314 (+) |
| LOC110494823 | LOC106566211 | coding | downstream | 401665 | 89532719 ~ 89539265 (+) |
| LOC110494822 | LOC106566210 | coding | downstream | 409106 | 89540160 ~ 89543408 (+) |
| LOC110494819 | LOC106565061 | coding | downstream | 1018628 | 90149682 ~ 90248746 (+) |
| LOC118940511 | NA | coding | downstream | 1447290 | 90578344 ~ 90587307 (+) |
| G1502478 | NA | non-coding | upstream | 45403 | 89073100 ~ 89084957 (+) |
| G1502465 | NA | non-coding | upstream | 99827 | 89030103 ~ 89030533 (+) |
| G1502462 | NA | non-coding | upstream | 105875 | 89023956 ~ 89024485 (+) |
| G1502439 | NA | non-coding | upstream | 148930 | 88980660 ~ 88981430 (+) |
| G1502860 | NA | non-coding | downstream | 34895 | 89165949 ~ 89166294 (+) |
| G1502862 | NA | non-coding | downstream | 36120 | 89167174 ~ 89168105 (+) |
| G1502883 | NA | non-coding | downstream | 75897 | 89206951 ~ 89214525 (+) |
| G1502898 | NA | non-coding | downstream | 119956 | 89251010 ~ 89251739 (+) |
| G1502904 | NA | non-coding | downstream | 132572 | 89263626 ~ 89263936 (+) |
| LOC110493303 | LOC106566213 | other | upstream | 16264 | 89106147 ~ 89150807 (+) |
| G1502370 | NA | other | upstream | 321391 | 88806978 ~ 88808969 (+) |
| G1502352 | NA | other | upstream | 329720 | 88769870 ~ 88800640 (+) |
| LOC110494816 | LOC106566192 | other | upstream | 1005486 | 88089634 ~ 88143474 (+) |
| LOC110494789 | bloc1s1 | other | upstream | 1643470 | 87415720 ~ 87486890 (+) |
| G1503119 | NA | other | downstream | 637503 | 89768557 ~ 89786154 (+) |
| G1503337 | NA | other | downstream | 1090491 | 90221545 ~ 90223659 (+) |
| LOC110504503 | LOC106566236 | other | downstream | 3154001 | 92282926 ~ 92317484 (+) |
| G1505894 | NA | other | downstream | 3188491 | 92319545 ~ 92320777 (+) |
| G1505924 | LOC106566233 | other | downstream | 3317532 | 92447734 ~ 92467632 (+) |
