Gene
RNA
| Item | Value |
|---|---|
| gene id | G1503415 |
| gene name | LOC106566213 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 89136252 ~ 89147369 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1719034 | True | 702 | lncRNA | 0.53 | 5 | 89136252 | 89147369 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118940510 | LOC106566201 | coding | downstream | 228577 | 88901858 ~ 88907675 (-) |
| LOC110493292 | NA | coding | downstream | 258800 | 88872775 ~ 88877452 (-) |
| LOC110494809 | LOC106566197 | coding | downstream | 535881 | 88437246 ~ 88600371 (-) |
| zgc:171566 | LOC106566184 | coding | downstream | 890747 | 88233684 ~ 88245505 (-) |
| LOC110494815 | NA | coding | downstream | 952495 | 88181683 ~ 88183757 (-) |
| pcbp4 | LOC106566209 | coding | upstream | 430203 | 89575961 ~ 89725809 (-) |
| LOC118940164 | NA | coding | upstream | 652305 | 89799674 ~ 89801444 (-) |
| LOC110494821 | NA | coding | upstream | 1355907 | 90503276 ~ 90504931 (-) |
| LOC110493301 | LOC105007334 | coding | upstream | 1357702 | 90505071 ~ 90866294 (-) |
| LOC110494831 | LOC106566219 | coding | upstream | 2263079 | 91410448 ~ 91412087 (-) |
| G1503394 | NA | non-coding | downstream | 29016 | 89106177 ~ 89107236 (-) |
| G1502818 | NA | non-coding | downstream | 53157 | 89075522 ~ 89083095 (-) |
| G1502759 | NA | non-coding | downstream | 170584 | 88954955 ~ 88965668 (-) |
| G1502757 | NA | non-coding | downstream | 187932 | 88947908 ~ 88948320 (-) |
| G1502745 | NA | non-coding | downstream | 201413 | 88929880 ~ 88934839 (-) |
| G1503433 | NA | non-coding | upstream | 26649 | 89174018 ~ 89174298 (-) |
| G1503461 | NA | non-coding | upstream | 103657 | 89251026 ~ 89655964 (-) |
| G1503470 | NA | non-coding | upstream | 121493 | 89268862 ~ 89270410 (-) |
| G1503498 | NA | non-coding | upstream | 216889 | 89364258 ~ 89364774 (-) |
| G1503505 | NA | non-coding | upstream | 236403 | 89383772 ~ 89384452 (-) |
| G1502566 | NA | other | downstream | 583421 | 88550366 ~ 88552831 (-) |
| G1502489 | NA | other | downstream | 710747 | 88358152 ~ 88425505 (-) |
| dnsl3 | dnsl3 | other | downstream | 960906 | 88162116 ~ 88175346 (-) |
| G1501745 | NA | other | downstream | 1740417 | 87394780 ~ 87395835 (-) |
| G1503624 | NA | other | upstream | 539046 | 89686415 ~ 89686877 (-) |
| G1505789 | NA | other | upstream | 2967924 | 92115293 ~ 92170717 (-) |
| G1506160 | NA | other | upstream | 3190684 | 92338053 ~ 92339443 (-) |
| G1506231 | NA | other | upstream | 3348643 | 92494406 ~ 92498948 (-) |
