G1502860


Basic Information

Item Value
gene id G1502860
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 89165949 ~ 89166294 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1718392
CAGAATTAAGTTGTGAAGAGGGTGGAACAGAATTAAGGTGTGAAGAGGGTGGAACAGAATTAAGGTGTGAAGAGGGTGGAACAGAATTAAGGTGTGAAGAGGGTGGAACAGAATCAAGGTGTGAAGAGGGTGGAACAGAATCAAGGTGTGAAGAGGGTGGAACAGAATCAAGGTGTGAAGAGGGTGGAACAGAATCAAGGTGTGATGAGGGTGGAACAGAATCAAGGTGTGAAGAGGGTGGAACAGAATCAAGGTGTGAAGAGGGTGGAACAGAATCAAGGTGTGAAGCGGGTGGAACAGCATAAAGGTGTGAAGAGGG

Function

NR:

description
PREDICTED: collagen alpha-1(IV) chain-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1718392 True 319 lncRNA 0.47 2 89165949 89166294

Neighbor

gene id symbol gene type direction distance location
LOC110493303 LOC106566213 coding upstream 15142 89106147 ~ 89150807 (+)
LOC110494825 LOC106566214 coding upstream 63558 88965847 ~ 89103615 (+)
ssuh2.1 LOC106566200 coding upstream 200311 88912896 ~ 88965638 (+)
cand2 LOC106566202 coding upstream 268440 88877784 ~ 88897509 (+)
LOC118940112 NA coding upstream 497898 88667045 ~ 88668051 (+)
LOC110494823 LOC106566211 coding downstream 366425 89532719 ~ 89539265 (+)
LOC110494822 LOC106566210 coding downstream 373866 89540160 ~ 89543408 (+)
LOC110494819 LOC106565061 coding downstream 983388 90149682 ~ 90248746 (+)
LOC118940511 NA coding downstream 1412050 90578344 ~ 90587307 (+)
LOC110493305 LOC106566226 coding downstream 2318331 91484625 ~ 91522092 (+)
G1502846 NA non-coding upstream 34895 89130360 ~ 89131054 (+)
G1502478 NA non-coding upstream 80992 89073100 ~ 89084957 (+)
G1502465 NA non-coding upstream 135416 89030103 ~ 89030533 (+)
G1502462 NA non-coding upstream 141464 89023956 ~ 89024485 (+)
G1502862 NA non-coding downstream 880 89167174 ~ 89168105 (+)
G1502883 NA non-coding downstream 40657 89206951 ~ 89214525 (+)
G1502898 NA non-coding downstream 84716 89251010 ~ 89251739 (+)
G1502904 NA non-coding downstream 97332 89263626 ~ 89263936 (+)
G1502939 NA non-coding downstream 195850 89362144 ~ 89363009 (+)
G1502370 NA other upstream 356980 88806978 ~ 88808969 (+)
G1502352 NA other upstream 365309 88769870 ~ 88800640 (+)
LOC110494816 LOC106566192 other upstream 1041075 88089634 ~ 88143474 (+)
LOC110494789 bloc1s1 other upstream 1679059 87415720 ~ 87486890 (+)
G1503119 NA other downstream 602263 89768557 ~ 89786154 (+)
G1503337 NA other downstream 1055251 90221545 ~ 90223659 (+)
LOC110504503 LOC106566236 other downstream 3118761 92282926 ~ 92317484 (+)
G1505894 NA other downstream 3153251 92319545 ~ 92320777 (+)
G1505924 LOC106566233 other downstream 3282292 92447734 ~ 92467632 (+)

Expression


Co-expression Network