G1502883


Basic Information

Item Value
gene id G1502883
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 89206951 ~ 89214525 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1718416
ctcagatggaccggcagattccgacaggacagggttgcagcaaacatgacgatagtctggttcaggcatgaataacacaaacaagaatccgacaaagacagaaacaaaaacagagagagatatagaggactaatcagagggaaaaagggaacaggtgggaaaaggggtgacgaggtagttaggaggagacaaggaacagctggaggaaagagggggagaaaaggtaacctaataacgaccagcagagggagacagggtgaagggaaaggacagaaacaagaacaggaacaggacacaacatgacaatacatgacactggggctctgtggggtgtgtttgtgtttgtgaaacagagcaccaggaccagcttgcttaggggactcttctccaggttcatctctctgtaggtgatggctttgttatggaaggtttgggaatcgcttccttttagggggttgtagaatttagcgtctcttttctggatt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1718416 True 485 lncRNA 0.47 2 89206951 89214525

Neighbor

gene id symbol gene type direction distance location
LOC110493303 LOC106566213 coding upstream 56144 89106147 ~ 89150807 (+)
LOC110494825 LOC106566214 coding upstream 104560 88965847 ~ 89103615 (+)
ssuh2.1 LOC106566200 coding upstream 241313 88912896 ~ 88965638 (+)
cand2 LOC106566202 coding upstream 309442 88877784 ~ 88897509 (+)
LOC118940112 NA coding upstream 538900 88667045 ~ 88668051 (+)
LOC110494823 LOC106566211 coding downstream 318194 89532719 ~ 89539265 (+)
LOC110494822 LOC106566210 coding downstream 325635 89540160 ~ 89543408 (+)
LOC110494819 LOC106565061 coding downstream 935157 90149682 ~ 90248746 (+)
LOC118940511 NA coding downstream 1363819 90578344 ~ 90587307 (+)
LOC110493305 LOC106566226 coding downstream 2270100 91484625 ~ 91522092 (+)
G1502862 NA non-coding upstream 38846 89167174 ~ 89168105 (+)
G1502860 NA non-coding upstream 40657 89165949 ~ 89166294 (+)
G1502846 NA non-coding upstream 75897 89130360 ~ 89131054 (+)
G1502478 NA non-coding upstream 121994 89073100 ~ 89084957 (+)
G1502898 NA non-coding downstream 36485 89251010 ~ 89251739 (+)
G1502904 NA non-coding downstream 49101 89263626 ~ 89263936 (+)
G1502939 NA non-coding downstream 147619 89362144 ~ 89363009 (+)
G1502954 NA non-coding downstream 180265 89394790 ~ 89395932 (+)
G1502955 NA non-coding downstream 181790 89396315 ~ 89398044 (+)
G1502370 NA other upstream 397982 88806978 ~ 88808969 (+)
G1502352 NA other upstream 406311 88769870 ~ 88800640 (+)
LOC110494816 LOC106566192 other upstream 1082077 88089634 ~ 88143474 (+)
LOC110494789 bloc1s1 other upstream 1720061 87415720 ~ 87486890 (+)
G1503119 NA other downstream 554032 89768557 ~ 89786154 (+)
G1503337 NA other downstream 1007020 90221545 ~ 90223659 (+)
LOC110504503 LOC106566236 other downstream 3070530 92282926 ~ 92317484 (+)
G1505894 NA other downstream 3105020 92319545 ~ 92320777 (+)
G1505924 LOC106566233 other downstream 3234061 92447734 ~ 92467632 (+)

Expression


Co-expression Network