Gene
RNA
| Item | Value |
|---|---|
| gene id | G1502980 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 89471406 ~ 89471950 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1718535 | True | 212 | lncRNA | 0.31 | 3 | 89471406 | 89471950 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493303 | LOC106566213 | coding | upstream | 320599 | 89106147 ~ 89150807 (+) |
| LOC110494825 | LOC106566214 | coding | upstream | 369015 | 88965847 ~ 89103615 (+) |
| ssuh2.1 | LOC106566200 | coding | upstream | 505768 | 88912896 ~ 88965638 (+) |
| cand2 | LOC106566202 | coding | upstream | 573897 | 88877784 ~ 88897509 (+) |
| LOC118940112 | NA | coding | upstream | 803355 | 88667045 ~ 88668051 (+) |
| LOC110494823 | LOC106566211 | coding | downstream | 60769 | 89532719 ~ 89539265 (+) |
| LOC110494822 | LOC106566210 | coding | downstream | 68210 | 89540160 ~ 89543408 (+) |
| LOC110494819 | LOC106565061 | coding | downstream | 677732 | 90149682 ~ 90248746 (+) |
| LOC118940511 | NA | coding | downstream | 1106394 | 90578344 ~ 90587307 (+) |
| LOC110493305 | LOC106566226 | coding | downstream | 2012675 | 91484625 ~ 91522092 (+) |
| G1502956 | NA | non-coding | upstream | 10612 | 89397344 ~ 89460794 (+) |
| G1502968 | NA | non-coding | upstream | 29556 | 89441366 ~ 89441850 (+) |
| G1502955 | NA | non-coding | upstream | 73362 | 89396315 ~ 89398044 (+) |
| G1502954 | NA | non-coding | upstream | 75474 | 89394790 ~ 89395932 (+) |
| G1502939 | NA | non-coding | upstream | 108397 | 89362144 ~ 89363009 (+) |
| G1502998 | NA | non-coding | downstream | 33432 | 89505382 ~ 89506775 (+) |
| LOC110493302 | LOC106583746 | non-coding | downstream | 49362 | 89162750 ~ 89524314 (+) |
| G1503029 | NA | non-coding | downstream | 127309 | 89599259 ~ 89599575 (+) |
| G1503034 | NA | non-coding | downstream | 134510 | 89606460 ~ 89607204 (+) |
| G1502370 | NA | other | upstream | 662437 | 88806978 ~ 88808969 (+) |
| G1502352 | NA | other | upstream | 670766 | 88769870 ~ 88800640 (+) |
| LOC110494816 | LOC106566192 | other | upstream | 1346532 | 88089634 ~ 88143474 (+) |
| LOC110494789 | bloc1s1 | other | upstream | 1984516 | 87415720 ~ 87486890 (+) |
| G1503119 | NA | other | downstream | 296607 | 89768557 ~ 89786154 (+) |
| G1503337 | NA | other | downstream | 749595 | 90221545 ~ 90223659 (+) |
| LOC110504503 | LOC106566236 | other | downstream | 2813105 | 92282926 ~ 92317484 (+) |
| G1505894 | NA | other | downstream | 2847595 | 92319545 ~ 92320777 (+) |
| G1505924 | LOC106566233 | other | downstream | 2976636 | 92447734 ~ 92467632 (+) |
