G1502998


Basic Information

Item Value
gene id G1502998
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 89505382 ~ 89506775 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1718554
acaccttccatctcttctgtctgtaatacttcaccacacaccttccatctcttctgtcaGTAATACTTcaccacacaccttccatctcttctgtctgtaatacttcatcacacaccttccatctcttctgtctgtaatccttcaccacacaccttccatctcttctgtctgtaatacttcaccacacaccttccatctcttctgtctgtaatccttcaccacacaccttccatctcttctgtctgtaatacttcaccacacaccttccatctcttctgtctgtaatacttcaccacacaccttccatctcttctgtctgtaatacttcaccacacaccttccatctcttctgtcaGTAATACTTcaccacacaccttccatctcttctgtctgtaatacttcaccacacaccttccatctcttctgtctgtaaatcttcaccacacaccttccatctcttctgtctgtaATACGTCatcacacaccttccatctcttctgtctgtctgtaatcctTCACCACACACCTTCTATCTCTTCTGTCTGTAATACGTCatcacacaccttccatctcttctgtctgtctgtattacgtcatcacacaccttccatctcttctgtctgtctgtaatacttcaccacacaccttctatctcttctgtctgtaatccttcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1718554 True 675 lncRNA 0.43 3 89505382 89506775
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110493303 LOC106566213 coding upstream 354575 89106147 ~ 89150807 (+)
LOC110494825 LOC106566214 coding upstream 402991 88965847 ~ 89103615 (+)
ssuh2.1 LOC106566200 coding upstream 539744 88912896 ~ 88965638 (+)
cand2 LOC106566202 coding upstream 607873 88877784 ~ 88897509 (+)
LOC118940112 NA coding upstream 837331 88667045 ~ 88668051 (+)
LOC110494823 LOC106566211 coding downstream 25944 89532719 ~ 89539265 (+)
LOC110494822 LOC106566210 coding downstream 33385 89540160 ~ 89543408 (+)
LOC110494819 LOC106565061 coding downstream 642907 90149682 ~ 90248746 (+)
LOC118940511 NA coding downstream 1071569 90578344 ~ 90587307 (+)
LOC110493305 LOC106566226 coding downstream 1977850 91484625 ~ 91522092 (+)
G1502980 NA non-coding upstream 33432 89471406 ~ 89471950 (+)
G1502956 NA non-coding upstream 44588 89397344 ~ 89460794 (+)
G1502968 NA non-coding upstream 63532 89441366 ~ 89441850 (+)
G1502955 NA non-coding upstream 107338 89396315 ~ 89398044 (+)
G1502954 NA non-coding upstream 109450 89394790 ~ 89395932 (+)
LOC110493302 LOC106583746 non-coding downstream 14537 89162750 ~ 89524314 (+)
G1503029 NA non-coding downstream 92484 89599259 ~ 89599575 (+)
G1503034 NA non-coding downstream 99685 89606460 ~ 89607204 (+)
G1503053 NA non-coding downstream 145325 89652100 ~ 89655991 (+)
G1502370 NA other upstream 696413 88806978 ~ 88808969 (+)
G1502352 NA other upstream 704742 88769870 ~ 88800640 (+)
LOC110494816 LOC106566192 other upstream 1380508 88089634 ~ 88143474 (+)
LOC110494789 bloc1s1 other upstream 2018492 87415720 ~ 87486890 (+)
G1503119 NA other downstream 261782 89768557 ~ 89786154 (+)
G1503337 NA other downstream 714770 90221545 ~ 90223659 (+)
LOC110504503 LOC106566236 other downstream 2778280 92282926 ~ 92317484 (+)
G1505894 NA other downstream 2812770 92319545 ~ 92320777 (+)
G1505924 LOC106566233 other downstream 2941811 92447734 ~ 92467632 (+)

Expression

G1502998 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
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G1502998 Expression in each Bioproject

Bar chart with 8 bars.
G1502998 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 70.
End of interactive chart.

Co-expression Network