G1503342


Basic Information

Item Value
gene id G1503342
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 90237645 ~ 90237905 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1718956
ctacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgaaaggtctacctacacctgttgtattcagcatttcactgaaaggtctactacacctgttgtattcggcatttcactgtaatgtctactacacctgttgtattcggcatttcactgtaatgtctactacacctgttgtattcagcatttcactgtaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1718956 True 223 lncRNA 0.39 2 90237645 90237905

Neighbor

gene id symbol gene type direction distance location
LOC110494822 LOC106566210 coding upstream 694237 89540160 ~ 89543408 (+)
LOC110494823 LOC106566211 coding upstream 698380 89532719 ~ 89539265 (+)
LOC110493302 LOC106583746 coding upstream 715250 89162750 ~ 89524314 (+)
LOC110493303 LOC106566213 coding upstream 1086838 89106147 ~ 89150807 (+)
LOC110494825 LOC106566214 coding upstream 1135254 88965847 ~ 89103615 (+)
LOC118940511 NA coding downstream 340439 90578344 ~ 90587307 (+)
LOC110493305 LOC106566226 coding downstream 1246720 91484625 ~ 91522092 (+)
LOC110494826 LOC106601490 coding downstream 1615434 91837358 ~ 91867163 (+)
LOC110519238 vgll4 coding downstream 1677497 91915402 ~ 92011967 (+)
LOC118940512 NA coding downstream 1777632 92015537 ~ 92020588 (+)
G1503329 NA non-coding upstream 35240 90201827 ~ 90202405 (+)
G1503322 NA non-coding upstream 45061 90191765 ~ 90192584 (+)
G1503319 NA non-coding upstream 49991 90187308 ~ 90187654 (+)
G1503318 NA non-coding upstream 51573 90185871 ~ 90186072 (+)
G1503316 NA non-coding upstream 53227 90184107 ~ 90184418 (+)
LOC110494819 LOC106565061 non-coding downstream 7392 90149682 ~ 90248746 (+)
G1503360 NA non-coding downstream 35115 90273020 ~ 90273255 (+)
G1503391 NA non-coding downstream 80139 90318044 ~ 90318919 (+)
G1503966 NA non-coding downstream 93582 90331487 ~ 90331695 (+)
G1503969 NA non-coding downstream 96559 90334464 ~ 90334689 (+)
G1503337 NA other upstream 13986 90221545 ~ 90223659 (+)
G1503119 NA other upstream 451491 89768557 ~ 89786154 (+)
G1502370 NA other upstream 1428676 88806978 ~ 88808969 (+)
G1502352 NA other upstream 1437005 88769870 ~ 88800640 (+)
LOC110504503 LOC106566236 other downstream 2047150 92282926 ~ 92317484 (+)
G1505894 NA other downstream 2081640 92319545 ~ 92320777 (+)
G1505924 LOC106566233 other downstream 2210681 92447734 ~ 92467632 (+)
G1506406 NA other downstream 2628301 92866206 ~ 92867034 (+)
G1506889 NA other downstream 3338912 93576817 ~ 93577604 (+)

Expression


Co-expression Network