G1503391


Basic Information

Item Value
gene id G1503391
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 90318044 ~ 90318919 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1719006
TGTTTTCTTTTCactaataacatcacatacatcTCATTCAAGCATTTCACACGAAGGCAGCACTTGAATATGTCACAAGACTATATCACTCAGTCTACTGAAtcactgaaacacagagagacatctgaaacacagagacagatctGAAtcactgaaacacagagagagatctggatcactgaaacacagagagacatctgaaagacagagagagatctgaATCacggaaacacagagagagatctgaatcactgaaacacagagagagatctgaatcactgaaacacagagagagatttgAATCAccgaaacacagagagagatctgaatcactgaaacacagagagagatctgAATCactgaaaaacagagagagatctgAATCactgaaaaacagagagagatctgaatcactgaaacacagagagagatctgAATCACTGAAAAACAGAGAGACATCTGAATCACTGAAACACAGAGAGCGATCTGAAtcactgaaacacagagagacatctGAAtcactgaaacacagagagagatctgAATCACTGAAAAACAGAGAGACATCTGAAAGGAATCTGCTCTTTGTAAACAAATGTAATTATTAGGTACTGCTTGAACATGTACATTTAAAAGAAAGGACATTGCTGTGTACAGTCTTTTGGGGTTCATTGTTTTTCTTTGGTCCACTGTTTTCAGAGAACTAATTGGGGAAAAAGTAAGTTGTACTGTATAGCTTTTTCTAGTAGATATTTCTACTATCGTCCCTATTTTCAGAGAAATCTTTAGGAGACATGTTATTTAATGCTATAT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106511605

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1719006 True 813 lncRNA 0.38 2 90318044 90318919

Neighbor

gene id symbol gene type direction distance location
LOC110494819 LOC106565061 coding upstream 69298 90149682 ~ 90248746 (+)
LOC110494822 LOC106566210 coding upstream 774636 89540160 ~ 89543408 (+)
LOC110494823 LOC106566211 coding upstream 778779 89532719 ~ 89539265 (+)
LOC110493302 LOC106583746 coding upstream 795649 89162750 ~ 89524314 (+)
LOC110493303 LOC106566213 coding upstream 1167237 89106147 ~ 89150807 (+)
LOC118940511 NA coding downstream 259425 90578344 ~ 90587307 (+)
LOC110493305 LOC106566226 coding downstream 1165706 91484625 ~ 91522092 (+)
LOC110494826 LOC106601490 coding downstream 1534420 91837358 ~ 91867163 (+)
LOC110519238 vgll4 coding downstream 1596483 91915402 ~ 92011967 (+)
LOC118940512 NA coding downstream 1696618 92015537 ~ 92020588 (+)
G1503360 NA non-coding upstream 44789 90273020 ~ 90273255 (+)
G1503342 NA non-coding upstream 80139 90237645 ~ 90237905 (+)
G1503329 NA non-coding upstream 115639 90201827 ~ 90202405 (+)
G1503322 NA non-coding upstream 125460 90191765 ~ 90192584 (+)
G1503966 NA non-coding downstream 12568 90331487 ~ 90331695 (+)
G1503969 NA non-coding downstream 15545 90334464 ~ 90334689 (+)
G1503976 NA non-coding downstream 21245 90340164 ~ 90340443 (+)
G1504012 NA non-coding downstream 54459 90373378 ~ 90373596 (+)
G1504013 NA non-coding downstream 54792 90373711 ~ 90373983 (+)
G1503337 NA other upstream 94385 90221545 ~ 90223659 (+)
G1503119 NA other upstream 531890 89768557 ~ 89786154 (+)
G1502370 NA other upstream 1509075 88806978 ~ 88808969 (+)
G1502352 NA other upstream 1517404 88769870 ~ 88800640 (+)
LOC110504503 LOC106566236 other downstream 1966136 92282926 ~ 92317484 (+)
G1505894 NA other downstream 2000626 92319545 ~ 92320777 (+)
G1505924 LOC106566233 other downstream 2129667 92447734 ~ 92467632 (+)
G1506406 NA other downstream 2547287 92866206 ~ 92867034 (+)
G1506889 NA other downstream 3257898 93576817 ~ 93577604 (+)

Expression


Co-expression Network