XLOC_003413 (BX321912.1)


Basic Information

Item Value
gene id XLOC_003413
gene name BX321912.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 21185469 ~ 21186684 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006682
GAgttaaataaagcattttatttcaattttctgttatatttaatacatacgcAGCAGCGTGGTCGTTCACCCAGTAGTGAACATGAAGGTCCAATTGATGGTCAAACATGACCACAAACCCGTTGGCCTTATTGACCTGGTCATTCAATTCTTTAGTTATAAAAGGATCTGAATTAAGTAATAAATGCTGTTTTGTTGCTTCCGCACAAGAATGTAACTTCAACCTCAGAGTCAGGAAAAATGGTTTTGAAAACCTCTGTAATGTTCTCAGACATAATAATCTCAGACATTAAGGACCCACATCACATCTGCCTGCAGAGTTGGTGTTGAGCCACAGTAAAggataGGATGTTCCTTTGCTGTGGCGGCAGGgctgggcaagctacttgaaaaatcttataagctaagctattagctactctacttaaaatgtagcttaactacactaaaagctaccctctgggaaatgtagcaagctaagctaaaaactaATTGgaaaaagtagcttagctacatctaagaaatttttacaatttttatttttaaatcgaacCAACTTAAATCCAATTCAATCAGATCtcagtgatcaataaaactgtcattgAAACATATGAGAcataattcagttcagttatttattgtaaataatatgctgtactaaacggaaacaaatt

Function

GO:

id name namespace
GO:0060359 response to ammonium ion biological_process
GO:0042493 response to drug biological_process
GO:0007584 response to nutrient biological_process
GO:0033273 response to vitamin biological_process
GO:0051583 dopamine uptake involved in synaptic transmission biological_process
GO:0051934 catecholamine uptake involved in synaptic transmission biological_process
GO:0090493 catecholamine uptake biological_process
GO:0090494 dopamine uptake biological_process

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000101371

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006682 True 674 lncRNA 0.35 2 21185469 21186684

Neighbor

gene id symbol gene type direction distance location
XLOC_003412 il10 coding upstream 45966 21137948 ~ 21139503 (+)
XLOC_003411 il19l coding upstream 85686 21096339 ~ 21099783 (+)
XLOC_003410 prelp coding upstream 99215 21076872 ~ 21086254 (+)
XLOC_003408 zgc:113307 coding upstream 123903 21050326 ~ 21061566 (+)
XLOC_003409 CU459075.1 coding upstream 133125 21052228 ~ 21052344 (+)
XLOC_003414 NA coding downstream 116028 21302712 ~ 21306762 (+)
XLOC_003415 NA coding downstream 220003 21406687 ~ 21408834 (+)
XLOC_003416 FAM72B coding downstream 399651 21586335 ~ 21598527 (+)
XLOC_003417 NA coding downstream 425987 21612671 ~ 21759025 (+)
XLOC_003418 CR812468.2 coding downstream 463838 21650522 ~ 21650638 (+)
XLOC_003369 CR854846.2 misc upstream 5062387 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 8473473 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 8491206 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 8499870 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 8505441 12679732 ~ 12680028 (+)
XLOC_003407 NA non-coding upstream 255145 20928241 ~ 20930324 (+)
XLOC_003405 NA non-coding upstream 294588 20888110 ~ 20890881 (+)
XLOC_003402 BX276115.1 non-coding upstream 1152284 20033066 ~ 20033185 (+)
XLOC_003395 CU207354.2 non-coding upstream 2352223 18832913 ~ 18833246 (+)
XLOC_003419 NA non-coding downstream 715993 21902677 ~ 21903694 (+)

Expression


Co-expression Network