G1505859


Basic Information

Item Value
gene id G1505859
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 92227328 ~ 92227553 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1721968
atcttacatataaaaccttatttgttcatcaaaaattgtgaataactcatcacaggttaatgagaagggtgtgcttgaaaggatgcgcataactctgcaatgttgggttgtattagaGAGAGTATCAGTCATAAATAAttctccacacacagtctgttcctgtatttagttttcatgctagtgagagccgagaatccactctcacataggtacgtggttgcaaagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1721968 True 226 lncRNA 0.38 1 92227328 92227553

Neighbor

gene id symbol gene type direction distance location
LOC118940512 NA coding upstream 209128 92015537 ~ 92020588 (+)
LOC110519238 vgll4 coding upstream 215361 91915402 ~ 92011967 (+)
LOC110494826 LOC106601490 coding upstream 368698 91837358 ~ 91867163 (+)
LOC110493305 LOC106566226 coding upstream 705236 91484625 ~ 91522092 (+)
LOC118940511 NA coding upstream 1640021 90578344 ~ 90587307 (+)
LOC118940166 NA coding downstream 18841 92246394 ~ 92247096 (+)
LOC110504503 LOC106566236 coding downstream 55373 92282926 ~ 92317484 (+)
LOC118940514 NA coding downstream 830145 93057698 ~ 93078808 (+)
LOC110494838 ippk coding downstream 872588 93100141 ~ 93131637 (+)
LOC110511384 ecm2 coding downstream 924673 93152226 ~ 93183983 (+)
G1505838 NA non-coding upstream 23035 92204071 ~ 92204293 (+)
G1505768 NA non-coding upstream 51083 92175859 ~ 92176245 (+)
G1505759 NA non-coding upstream 64091 92161727 ~ 92163237 (+)
G1505728 NA non-coding upstream 132778 92093017 ~ 92094550 (+)
G1505704 NA non-coding upstream 165060 92062059 ~ 92062268 (+)
G1505861 NA non-coding downstream 4605 92232158 ~ 92232380 (+)
G1505873 NA non-coding downstream 27988 92255541 ~ 92255749 (+)
G1505879 NA non-coding downstream 39215 92266768 ~ 92266995 (+)
G1505880 NA non-coding downstream 39844 92267397 ~ 92267687 (+)
G1503337 NA other upstream 2003669 90221545 ~ 90223659 (+)
G1503119 NA other upstream 2441174 89768557 ~ 89786154 (+)
LOC110493303 LOC106566213 other upstream 3113232 89106147 ~ 89150807 (+)
G1502370 NA other upstream 3418359 88806978 ~ 88808969 (+)
G1502352 NA other upstream 3426688 88769870 ~ 88800640 (+)
G1505894 NA other downstream 91992 92319545 ~ 92320777 (+)
G1505924 LOC106566233 other downstream 221033 92447734 ~ 92467632 (+)
G1506406 NA other downstream 638653 92866206 ~ 92867034 (+)
G1506889 NA other downstream 1349264 93576817 ~ 93577604 (+)

Expression


Co-expression Network