G1505861


Basic Information

Item Value
gene id G1505861
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 92232158 ~ 92232380 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1721970
gatctgccttctgtctgtactgggtctgaagttcaaatgtatgcagatgatacagtgatatatgtgcaaagagcaaacaagctgcacaagaactcactactgtaatggtccaggttacaaagtggctcagtgactcgtgtttgcatctcaatgtgaaaaaaactgtttgcatgttcttcacaaagagggcaacagatgctactgagccagatgtctatgtgtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1721970 True 223 lncRNA 0.43 1 92232158 92232380

Neighbor

gene id symbol gene type direction distance location
LOC118940512 NA coding upstream 213958 92015537 ~ 92020588 (+)
LOC110519238 vgll4 coding upstream 220191 91915402 ~ 92011967 (+)
LOC110494826 LOC106601490 coding upstream 373528 91837358 ~ 91867163 (+)
LOC110493305 LOC106566226 coding upstream 710066 91484625 ~ 91522092 (+)
LOC118940511 NA coding upstream 1644851 90578344 ~ 90587307 (+)
LOC118940166 NA coding downstream 14014 92246394 ~ 92247096 (+)
LOC110504503 LOC106566236 coding downstream 50546 92282926 ~ 92317484 (+)
LOC118940514 NA coding downstream 825318 93057698 ~ 93078808 (+)
LOC110494838 ippk coding downstream 867761 93100141 ~ 93131637 (+)
LOC110511384 ecm2 coding downstream 919846 93152226 ~ 93183983 (+)
G1505859 NA non-coding upstream 4605 92227328 ~ 92227553 (+)
G1505838 NA non-coding upstream 27865 92204071 ~ 92204293 (+)
G1505768 NA non-coding upstream 55913 92175859 ~ 92176245 (+)
G1505759 NA non-coding upstream 68921 92161727 ~ 92163237 (+)
G1505728 NA non-coding upstream 137608 92093017 ~ 92094550 (+)
G1505873 NA non-coding downstream 23161 92255541 ~ 92255749 (+)
G1505879 NA non-coding downstream 34388 92266768 ~ 92266995 (+)
G1505880 NA non-coding downstream 35017 92267397 ~ 92267687 (+)
G1505922 NA non-coding downstream 138603 92370983 ~ 92371574 (+)
G1503337 NA other upstream 2008499 90221545 ~ 90223659 (+)
G1503119 NA other upstream 2446004 89768557 ~ 89786154 (+)
LOC110493303 LOC106566213 other upstream 3118062 89106147 ~ 89150807 (+)
G1502370 NA other upstream 3423189 88806978 ~ 88808969 (+)
G1502352 NA other upstream 3431518 88769870 ~ 88800640 (+)
G1505894 NA other downstream 87165 92319545 ~ 92320777 (+)
G1505924 LOC106566233 other downstream 216206 92447734 ~ 92467632 (+)
G1506406 NA other downstream 633826 92866206 ~ 92867034 (+)
G1506889 NA other downstream 1344437 93576817 ~ 93577604 (+)

Expression


Co-expression Network