G1505880


Basic Information

Item Value
gene id G1505880
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 92267397 ~ 92267687 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1721993
ccatagggatggtgccaggtttcctccagacgtgaaacTTGTcactcaggccaaagagtttaatcttggtttcatcagagcagagaatcttgtttctcatggtctgagagtctttaggtgccttttggcaaactccaagtgggctgtcatgtgccttttactgaggagtggcttccgtctggtcactctaccataaagacctgattggtggagtgctgcagagatggttgtccttctggaaggttctcccatctccacagagaaactctggagctctgtcagagtgaccat

Function

NR:

description
transposase, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1721993 True 291 lncRNA 0.49 1 92267397 92267687

Neighbor

gene id symbol gene type direction distance location
LOC118940166 NA coding upstream 20301 92246394 ~ 92247096 (+)
LOC118940512 NA coding upstream 249197 92015537 ~ 92020588 (+)
LOC110519238 vgll4 coding upstream 255430 91915402 ~ 92011967 (+)
LOC110494826 LOC106601490 coding upstream 408767 91837358 ~ 91867163 (+)
LOC110493305 LOC106566226 coding upstream 745305 91484625 ~ 91522092 (+)
LOC110504503 LOC106566236 coding downstream 15239 92282926 ~ 92317484 (+)
LOC118940514 NA coding downstream 790011 93057698 ~ 93078808 (+)
LOC110494838 ippk coding downstream 832454 93100141 ~ 93131637 (+)
LOC110511384 ecm2 coding downstream 884539 93152226 ~ 93183983 (+)
LOC110494840 LOC106566248 coding downstream 958832 93226519 ~ 93242451 (+)
G1505879 NA non-coding upstream 402 92266768 ~ 92266995 (+)
G1505873 NA non-coding upstream 11648 92255541 ~ 92255749 (+)
G1505861 NA non-coding upstream 35017 92232158 ~ 92232380 (+)
G1505859 NA non-coding upstream 39844 92227328 ~ 92227553 (+)
G1505838 NA non-coding upstream 63104 92204071 ~ 92204293 (+)
G1505922 NA non-coding downstream 103296 92370983 ~ 92371574 (+)
G1505943 NA non-coding downstream 126221 92393908 ~ 92395109 (+)
G1505923 NA non-coding downstream 177365 92445052 ~ 92445750 (+)
G1505924 LOC106566233 non-coding downstream 180047 92447734 ~ 92467632 (+)
G1503337 NA other upstream 2043738 90221545 ~ 90223659 (+)
G1503119 NA other upstream 2481243 89768557 ~ 89786154 (+)
LOC110493303 LOC106566213 other upstream 3153301 89106147 ~ 89150807 (+)
G1502370 NA other upstream 3458428 88806978 ~ 88808969 (+)
G1502352 NA other upstream 3466757 88769870 ~ 88800640 (+)
G1505894 NA other downstream 51858 92319545 ~ 92320777 (+)
G1506406 NA other downstream 598519 92866206 ~ 92867034 (+)
G1506889 NA other downstream 1309130 93576817 ~ 93577604 (+)

Expression


Co-expression Network