G1505943


Basic Information

Item Value
gene id G1505943
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 92393908 ~ 92395109 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1722076
aaaggaataaatacatgtaaacatctctcagatataggacagacactttctgttattcaatgtgtttctattggctaatagcagtaaggactatctgttattcaatgtgtttctattggctaatagcagtaaggactatctgttattcaatgtgtttctatgggctaatagcagtaaggactatctgttattcaatgtgtttctatgggctaatagcagtaaggactatctgttattcaatgtgtttctatgggctaatagcagtaaggactatctgttattcaatgtgtttctattggctaatagcagtaaggacaatgtgtttctattggctaatagcagtaaggactatctgttattcaatgtgtttctattggctaatagcagtaaggaccatgtgtttctattggctaatagcagtaaggacc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106610361

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1722076 True 428 lncRNA 0.35 2 92393908 92395109

Neighbor

gene id symbol gene type direction distance location
LOC110504503 LOC106566236 coding upstream 78836 92282926 ~ 92317484 (+)
LOC118940166 NA coding upstream 146812 92246394 ~ 92247096 (+)
LOC118940512 NA coding upstream 375708 92015537 ~ 92020588 (+)
LOC110519238 vgll4 coding upstream 381941 91915402 ~ 92011967 (+)
LOC110494826 LOC106601490 coding upstream 535278 91837358 ~ 91867163 (+)
LOC118940514 NA coding downstream 662589 93057698 ~ 93078808 (+)
LOC110494838 ippk coding downstream 705032 93100141 ~ 93131637 (+)
LOC110511384 ecm2 coding downstream 757117 93152226 ~ 93183983 (+)
LOC110494840 LOC106566248 coding downstream 831410 93226519 ~ 93242451 (+)
stab1 LOC106566251 coding downstream 898954 93294063 ~ 93442319 (+)
G1505922 NA non-coding upstream 22334 92370983 ~ 92371574 (+)
G1505880 NA non-coding upstream 126221 92267397 ~ 92267687 (+)
G1505879 NA non-coding upstream 126913 92266768 ~ 92266995 (+)
G1505873 NA non-coding upstream 138159 92255541 ~ 92255749 (+)
G1505923 NA non-coding downstream 49943 92445052 ~ 92445750 (+)
G1505924 LOC106566233 non-coding downstream 52625 92447734 ~ 92467632 (+)
G1505975 NA non-coding downstream 83135 92478244 ~ 92479110 (+)
G1505989 NA non-coding downstream 102171 92497280 ~ 92498537 (+)
G1506012 NA non-coding downstream 144569 92539678 ~ 92540018 (+)
G1505894 NA other upstream 73131 92319545 ~ 92320777 (+)
G1503337 NA other upstream 2170249 90221545 ~ 90223659 (+)
G1503119 NA other upstream 2607754 89768557 ~ 89786154 (+)
LOC110493303 LOC106566213 other upstream 3279812 89106147 ~ 89150807 (+)
G1506406 NA other downstream 471097 92866206 ~ 92867034 (+)
G1506889 NA other downstream 1181708 93576817 ~ 93577604 (+)
G1507612 NA other downstream 1955104 94350213 ~ 94351111 (+)
G1508290 NA other downstream 2278454 94673563 ~ 94673937 (+)

Expression


Co-expression Network