G1506590


Basic Information

Item Value
gene id G1506590
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 92961441 ~ 92966539 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1722926
gatggtatgaccccaggacaatagacccagctagtttcaaaaggctaatAGTATGACCCATGGACAATAGCCcgagctagtttcaaaaggctgatggtatgaccccaggacaacagacccagctagtttcaaaaggttgatggtatgacccctggacaatagacccagctagtttcaaaaggctgatggtatgaccccaggacaatagacccagctagtttcaagaggctgatggtatgaccccaggacaatagacccagctagtttcaaaaggctgatggtatgaccccaggacaatagacccagctagtttcaaaaggctgatggtatgacccctggacaatagacccagctagtttcaaaaggctgatggtatgaccccaggacaatagacccagctagtttcaaaaggctgatggtatgaccctaggacaatagacccagctagtttcaaaaggctgatggtatgaccccaggacaacaGACCCATTTAGTTTGGTaatgctgatggtatgacccctggacaatagacccagctagtttcaaaaggctgatggtatgaccccaggacaatagacccatcttgtttcaaaaggctgatggtatgaccccaggacaatagaaccagctagtttcaaaaggctggtGGTATGACCCCatgacaatagacccagctagtttcaaaaggctgatggtatgaccccaggacaatagacccagctagtttcaaaaggctgatggtatgacaccaggacaatagacccatcttgtttcaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1722926 True 777 lncRNA 0.47 3 92961441 92966539

Neighbor

gene id symbol gene type direction distance location
LOC110504503 LOC106566236 coding upstream 646369 92282926 ~ 92317484 (+)
LOC118940166 NA coding upstream 714345 92246394 ~ 92247096 (+)
LOC118940512 NA coding upstream 943241 92015537 ~ 92020588 (+)
LOC110519238 vgll4 coding upstream 949474 91915402 ~ 92011967 (+)
LOC110494826 LOC106601490 coding upstream 1102811 91837358 ~ 91867163 (+)
LOC118940514 NA coding downstream 91159 93057698 ~ 93078808 (+)
LOC110494838 ippk coding downstream 133602 93100141 ~ 93131637 (+)
LOC110511384 ecm2 coding downstream 185687 93152226 ~ 93183983 (+)
LOC110494840 LOC106566248 coding downstream 259980 93226519 ~ 93242451 (+)
stab1 LOC106566251 coding downstream 327524 93294063 ~ 93442319 (+)
G1506577 NA non-coding upstream 13570 92947672 ~ 92947871 (+)
G1506576 NA non-coding upstream 14211 92946954 ~ 92947230 (+)
G1506572 NA non-coding upstream 15368 92945725 ~ 92946073 (+)
G1506571 NA non-coding upstream 15943 92945182 ~ 92945498 (+)
G1506415 NA non-coding upstream 24578 92876429 ~ 92936863 (+)
G1506612 NA non-coding downstream 33950 93000489 ~ 93013431 (+)
G1506616 NA non-coding downstream 42083 93008622 ~ 93018397 (+)
G1506617 NA non-coding downstream 47028 93013567 ~ 93015425 (+)
G1506614 NA non-coding downstream 63294 93029833 ~ 93031396 (+)
G1506649 NA non-coding downstream 77102 93043641 ~ 93044172 (+)
G1506406 NA other upstream 94407 92866206 ~ 92867034 (+)
G1505924 LOC106566233 other upstream 511500 92447734 ~ 92467632 (+)
G1505894 NA other upstream 640664 92319545 ~ 92320777 (+)
G1503337 NA other upstream 2737782 90221545 ~ 90223659 (+)
G1506889 NA other downstream 610278 93576817 ~ 93577604 (+)
G1507612 NA other downstream 1383674 94350213 ~ 94351111 (+)
G1508290 NA other downstream 1707024 94673563 ~ 94673937 (+)
G1508614 NA other downstream 2114865 95081404 ~ 95082050 (+)
G1508618 NA other downstream 2123729 95090268 ~ 95090709 (+)

Expression


Co-expression Network