G1506649


Basic Information

Item Value
gene id G1506649
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 93043641 ~ 93044172 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1723037
taataatgttgttTTAGGTCAAAGTGTCGTAACACTGAGGTTGTCAATAAACAGTGACAAGGCTGATGGAGAACACTATGCTCTCTAGGTGTGAGAATATGCAGGGCCAGGAGTCCTAGTCGGGGATAACCCTGGGCTCTAGTCGGGGATAACCCTGGGCTCTAGTCGGGGATAACCCTGGGCTATAGATCATGTAATGTGCAGCATCCTGCCGGTCCGGtagactgagtggacaaaacattaagaacaccttttgAATATTGAGTTGTGCCCCAGCAACGGTACAGTTCTCTACACAAACCagggcacctactaccatacccggttcaaaggcacctactaccatacccggttcaaaggcgcctactaccatacccggttcaaaggcgcctactaccatacccggttcaaaggcgcctactaccatacccggttcaaaggcacctactaccatacccggttcaaaggcacctactaccatacccggttcaaaggcacctactaccata

Function

NR:

description
PREDICTED: proteoglycan 4-like isoform X10

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1723037 True 509 lncRNA 0.50 2 93043641 93044172

Neighbor

gene id symbol gene type direction distance location
LOC110504503 LOC106566236 coding upstream 728569 92282926 ~ 92317484 (+)
LOC118940166 NA coding upstream 796545 92246394 ~ 92247096 (+)
LOC118940512 NA coding upstream 1025441 92015537 ~ 92020588 (+)
LOC110519238 vgll4 coding upstream 1031674 91915402 ~ 92011967 (+)
LOC110494826 LOC106601490 coding upstream 1185011 91837358 ~ 91867163 (+)
LOC118940514 NA coding downstream 13526 93057698 ~ 93078808 (+)
LOC110494838 ippk coding downstream 55969 93100141 ~ 93131637 (+)
LOC110511384 ecm2 coding downstream 108054 93152226 ~ 93183983 (+)
LOC110494840 LOC106566248 coding downstream 182347 93226519 ~ 93242451 (+)
stab1 LOC106566251 coding downstream 249891 93294063 ~ 93442319 (+)
G1506614 NA non-coding upstream 12245 93029833 ~ 93031396 (+)
G1506616 NA non-coding upstream 25244 93008622 ~ 93018397 (+)
G1506617 NA non-coding upstream 28216 93013567 ~ 93015425 (+)
G1506612 NA non-coding upstream 30210 93000489 ~ 93013431 (+)
G1506590 NA non-coding upstream 77102 92961441 ~ 92966539 (+)
G1506633 NA non-coding downstream 38174 93082346 ~ 93084882 (+)
G1506635 NA non-coding downstream 41608 93085780 ~ 93087724 (+)
G1506670 NA non-coding downstream 70576 93114748 ~ 93119698 (+)
G1506671 NA non-coding downstream 73008 93117180 ~ 93119109 (+)
G1506631 NA non-coding downstream 146025 93190197 ~ 93192400 (+)
G1506406 NA other upstream 176607 92866206 ~ 92867034 (+)
G1505924 LOC106566233 other upstream 593700 92447734 ~ 92467632 (+)
G1505894 NA other upstream 722864 92319545 ~ 92320777 (+)
G1503337 NA other upstream 2819982 90221545 ~ 90223659 (+)
G1506889 NA other downstream 532645 93576817 ~ 93577604 (+)
G1507612 NA other downstream 1306041 94350213 ~ 94351111 (+)
G1508290 NA other downstream 1629391 94673563 ~ 94673937 (+)
G1508614 NA other downstream 2037232 95081404 ~ 95082050 (+)
G1508618 NA other downstream 2046096 95090268 ~ 95090709 (+)

Expression


Co-expression Network