Gene
RNA
| Item | Value |
|---|---|
| gene id | G1506975 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 93058569 ~ 93059133 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| protein shisa-4-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1723440 | True | 364 | lncRNA | 0.45 | 3 | 93058569 | 93059133 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494837 | LOC106566237 | coding | downstream | 4394 | 93042606 ~ 93054175 (-) |
| LOC118940167 | LOC106566237 | coding | downstream | 20210 | 93034702 ~ 93038359 (-) |
| LOC110494836 | LOC106566241 | coding | downstream | 127362 | 92902401 ~ 92931207 (-) |
| LOC110494834 | NA | coding | downstream | 222131 | 92828908 ~ 92836438 (-) |
| LOC118940649 | NA | coding | downstream | 225818 | 92832524 ~ 92832751 (-) |
| LOC118940168 | NA | coding | upstream | 21214 | 93080347 ~ 93082272 (-) |
| LOC110494849 | LOC106566252 | coding | upstream | 418312 | 93477445 ~ 93494951 (-) |
| LOC110493308 | NA | coding | upstream | 441067 | 93500200 ~ 93529938 (-) |
| LOC110494848 | pdhb | coding | upstream | 472557 | 93531690 ~ 93557343 (-) |
| LOC118940515 | NA | coding | upstream | 508682 | 93567815 ~ 93572808 (-) |
| G1506621 | NA | non-coding | downstream | 28067 | 93002869 ~ 93030502 (-) |
| G1506605 | NA | non-coding | downstream | 68792 | 92986410 ~ 92989777 (-) |
| G1506565 | NA | non-coding | downstream | 118562 | 92939767 ~ 92940007 (-) |
| G1506561 | NA | non-coding | downstream | 120574 | 92937775 ~ 92937995 (-) |
| G1506996 | NA | non-coding | upstream | 52577 | 93111710 ~ 93111982 (-) |
| G1506997 | NA | non-coding | upstream | 52988 | 93112121 ~ 93112711 (-) |
| G1506998 | NA | non-coding | upstream | 53803 | 93112936 ~ 93120114 (-) |
| G1507007 | NA | non-coding | upstream | 77079 | 93136212 ~ 93138244 (-) |
| G1507034 | NA | non-coding | upstream | 123298 | 93182431 ~ 93183959 (-) |
| G1506965 | NA | other | downstream | 14204 | 93043731 ~ 93044365 (-) |
| G1506543 | NA | other | downstream | 194595 | 92863102 ~ 92863974 (-) |
| G1506231 | NA | other | downstream | 559621 | 92494406 ~ 92498948 (-) |
| G1506160 | NA | other | downstream | 719126 | 92338053 ~ 92339443 (-) |
| G1506957 | NA | other | upstream | 26549 | 93085682 ~ 93088708 (-) |
| G1507093 | NA | other | upstream | 347160 | 93406293 ~ 93407212 (-) |
| G1507961 | timp4 | other | upstream | 1104957 | 94164090 ~ 94198079 (-) |
| phf2 | phf2 | other | upstream | 1802493 | 94861445 ~ 94996238 (-) |
