G1507034


Basic Information

Item Value
gene id G1507034
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 93182431 ~ 93183959 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1723511
TAAAGATGAATAAAACACTGAGAAATGGAAGGTACATACAGTGTGTTTACCTAGCAGAATGTTTCCCACAGACCTTAACAGTACATTAACATGCGTCGCAGGTTGTACGCATCACTCAGTAATATTGAGACACCGTCGGAGGCTGCTGATTTAGGGACATTTTCTTGATATACTGTAACAACCCGTACTTGACAGATTTCGGGACACGGCCAGTGACAGTTTCTTTTGGTTTTTACTAGAATAACAGACAGAATACACAGGCTGAATTCCACGTGGACTTCCAGGCATTTCCTCTCGATCTGAGAGGATCATCGTCATTTAATTCTTCCTTTGTAATTGGCTGAAACAATATGGTAATTACGTGATCTTGCCTTCTGATTGGCTGTGTGGAAATGTAGCCATATTGTTTACAcctttcagatctacaggagtgcctAAAGAGAAGGTGCTAAGGGGTATgcttgttatgttatgttatgttgttaATGTTAGAAGCATGTGACTTCATCCACTGAGGTTTCAACACAGCTGGTGATTTAGTTACATTTTACTGGAATTTTAGTGGTAAAAAGACGCTTGTTACATGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAACGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGCATGTTACTTGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAGCGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGCATGTTACTTGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAGCGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGCATGTTACTTGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAACGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGCATGTTACTTGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAGCGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGTTCTCCAGACGCAGCGTCAATATGTTAGCGTCCTCGTCGTTCTCGGGGTCACAGAAAGCGTCCTCTGCAAAC
>TU1723514
TAAAGATGAATAAAACACTGAGAAATGGAAGGTACATACAGTGTGTTTACCTAGCAGAATGTTTCCCACAGACCTTAACAGTACATTAACATGCGTCGCAGGTTGTACGCATCACTCAGTAATATTGAGACACCGTCGGAGGCTGCTGATTTAGGGACATTTTCTTGATATACTGTAACAACCCGTACTTGACAGATTTCGGGACACGGCCAGTGACAGTTTCTTTTGGTTTTTACTAGAATAACAGACAGAATACACAGGCTGAATTCCACGTGGACTTCCAGGCATTTCCTCTCGATCTGAGAGGATCATCGTCATTTAATTCTTCCTTTGTAATTGGCTGAAACAATATGGTAATTACGTGATCTTGCCTTCTGATTGGCTGTGTGGAAATGTAGCCATATTGTTTACAcctttcagatctacaggagtgcctAAAGAGAAGGTGCTAAGGGGTATgcttgttatgttatgttatgttgttaATGTTAGAAGCATGTGACTTCATCCACTGAGGTTTCAACACAGCTGGTGATTTAGTTACATTTTACTGGAATTTTAGTGGTAAAAAGACGCTTGTTACATGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAACGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGCATGTTACTTGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAACGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGCATGTTACTTGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAGCGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTAGGGTCGATGTAGTTGCATGTTACTTGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAGCGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGTTCTCCAGACGCAGCGTCAATATGTTAGCGTCCTCGTCGTTCTCGGGGTCACAGAAAGCGTCCTCTGCAAAC
>TU1723516
TAAAGATGAATAAAACACTGAGAAATGGAAGGTACATACAGTGTGTTTACCTAGCAGAATGTTTCCCACAGACCTTAACAGTACATTAACATGCGTCGCAGGTTGTACGCATCACTCAGTAATATTGAGACACCGTCGGAGGCTGCTGATTTAGGGACATTTTCTTGATATACTGTAACAACCCGTACTTGACAGATTTCGGGACACGGCCAGTGACAGTTTCTTTTGGTTTTTACTAGAATAACAGACAGAATACACAGGCTGAATTCCACGTGGACTTCCAGGCATTTCCTCTCGATCTGAGAGGATCATCGTCATTTAATTCTTCCTTTGTAATTGGCTGAAACAATATGGTAATTACGTGATCTTGCCTTCTGATTGGCTGTGTGGAAATGTAGCCATATTGTTTACAcctttcagatctacaggagtgcctAAAGAGAAGGTGCTAAGGGGTATgcttgttatgttatgttatgttgttaATGTTAGAAGCATGTGACTTCATCCACTGAGGTTTCAACACAGCTGGTGATTTAGTTACATTTTACTGGAATTTTAGTGGTAAAAAGACGCTTGTTACATGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAGCGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGCATGTTACTTGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAGCGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGCATGTTACTTGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAGCGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGTTCTCCAGACGCAGCGTCAATATGTTAGCGTCCTCGTCGTTCTCGGGGTCACAGAAAGCGTCCTCTGCAAAC
>TU1723518
TAAAGATGAATAAAACACTGAGAAATGGAAGGTACATACAGTGTGTTTACCTAGCAGAATGTTTCCCACAGACCTTAACAGTACATTAACATGCGTCGCAGGTTGTACGCATCACTCAGTAATATTGAGACACCGTCGGAGGCTGCTGATTTAGGGACATTTTCTTGATATACTGTAACAACCCGTACTTGACAGATTTCGGGACACGGCCAGTGACAGTTTCTTTTGGTTTTTACTAGAATAACAGACAGAATACACAGGCTGAATTCCACGTGGACTTCCAGGCATTTCCTCTCGATCTGAGAGGATCATCGTCATTTAATTCTTCCTTTGTAATTGGCTGAAACAATATGGTAATTACGTGATCTTGCCTTCTGATTGGCTGTGTGGAAATGTAGCCATATTGTTTACAcctttcagatctacaggagtgcctAAAGAGAAGGTGCTAAGGGGTATgcttgttatgttatgttatgttgttaATGTTAGAAGCATGTGACTTCATCCACTGAGGTTTCAACACAGCTGGTGATTTAGTTACATTTTACTGGAATTTTAGTGGTAAAAAGACGCTTGTTACATGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAACGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGCATGTTACTTGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAGCGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGCACGTTACTTGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAGCGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGCATGTTACTTGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAGCGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGCATGTTACTTGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAACGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGCATGTTACTTGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAGCGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGTTCTCCAGACGCAGCGTCAATATGTTAGCGTCCTCGTCGTTCTCGGGGTCACAGAAAGCGTCCTCTGCAAAC
>TU1723519
TAAAGATGAATAAAACACTGAGAAATGGAAGGTACATACAGTGTGTTTACCTAGCAGAATGTTTCCCACAGACCTTAACAGTACATTAACATGCGTCGCAGGTTGTACGCATCACTCAGTAATATTGAGACACCGTCGGAGGCTGCTGATTTAGGGACATTTTCTTGATATACTGTAACAACCCGTACTTGACAGATTTCGGGACACGGCCAGTGACAGTTTCTTTTGGTTTTTACTAGAATAACAGACAGAATACACAGGCTGAATTCCACGTGGACTTCCAGGCATTTCCTCTCGATCTGAGAGGATCATCGTCATTTAATTCTTCCTTTGTAATTGGCTGAAACAATATGGTAATTACGTGATCTTGCCTTCTGATTGGCTGTGTGGAAATGTAGCCATATTGTTTACAcctttcagatctacaggagtgcctAAAGAGAAGGTGCTAAGGGGTATgcttgttatgttatgttatgttgttaATGTTAGAAGCATGTGACTTCATCCACTGAGGTTTCAACACAGCTGGTGATTTAGTTACATTTTACTGGAATTTTAGTGGTAAAAAGACGCTTGTTACATGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAACGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGCATGTTACTTGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAGCGTACGCAGGAGAAGGCGGAGGAAGAGATTTTCCTGGGGTCGATGTAGTTGCATGTTACTTGGTCTACTGAGGTTTCAAGACGATGCTGGAGTAGGAACGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGCATGTTACTTGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAGCGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTAGGGTCGATGTAGTTGCATGTTACTTGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAGCGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGTTCTCCAGACGCAGCGTCAATATGTTAGCGTCCTCGTCGTTCTCGGGGTCACAGAAAGCGTCCTCTGCAAAC
>TU1723520
TAAAGATGAATAAAACACTGAGAAATGGAAGGTACATACAGTGTGTTTACCTAGCAGAATGTTTCCCACAGACCTTAACAGTACATTAACATGCGTCGCAGGTTGTACGCATCACTCAGTAATATTGAGACACCGTCGGAGGCTGCTGATTTAGGGACATTTTCTTGATATACTGTAACAACCCGTACTTGACAGATTTCGGGACACGGCCAGTGACAGTTTCTTTTGGTTTTTACTAGAATAACAGACAGAATACACAGGCTGAATTCCACGTGGACTTCCAGGCATTTCCTCTCGATCTGAGAGGATCATCGTCATTTAATTCTTCCTTTGTAATTGGCTGAAACAATATGGTAATTACGTGATCTTGCCTTCTGATTGGCTGTGTGGAAATGTAGCCATATTGTTTACAcctttcagatctacaggagtgcctAAAGAGAAGGTGCTAAGGGGTATgcttgttatgttatgttatgttgttaATGTTAGAAGCATGTGACTTCATCCACTGAGGTTTCAACACAGCTGGTGATTTAGTTACATTTTACTGGAATTTTAGTGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAACGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGCATGTTACTTGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAGCGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGCATGTTACTTGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAGCGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGCATGTTACTTGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAACGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGCATGTTACTTGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAGCGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGTTCTCCAGACGCAGCGTCAATATGTTAGCGTCCTCGTCGTTCTCGGGGTCACAGAAAGCGTCCTCTGCAAAC
>TU1723521
TAAAGATGAATAAAACACTGAGAAATGGAAGGTACATACAGTGTGTTTACCTAGCAGAATGTTTCCCACAGACCTTAACAGTACATTAACATGCGTCGCAGGTTGTACGCATCACTCAGTAATATTGAGACACCGTCGGAGGCTGCTGATTTAGGGACATTTTCTTGATATACTGTAACAACCCGTACTTGACAGATTTCGGGACACGGCCAGTGACAGTTTCTTTTGGTTTTTACTAGAATAACAGACAGAATACACAGGCTGAATTCCACGTGGACTTCCAGGCATTTCCTCTCGATCTGAGAGGATCATCGTCATTTAATTCTTCCTTTGTAATTGGCTGAAACAATATGGTAATTACGTGATCTTGCCTTCTGATTGGCTGTGTGGAAATGTAGCCATATTGTTTACAcctttcagatctacaggagtgcctAAAGAGAAGGTGCTAAGGGGTATgcttgttatgttatgttatgttgttaATGTTAGAAGCATGTGACTTCATCCACTGAGGTTTCAACACAGCTGGTGATTTAGTTACATTTTACTGGAATTTTAGTGGTAAAAAGACGCTTGTTACATGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAACGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGCATGTTACTTGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAGCGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGCACGTTACTTGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAGCGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGCATGTTACTTGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAGCGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGCATGTTACTTGGTCCACTGAGGTTTCAAGACGATGCTGGAGTAGGAGCGTACGCAGGAGAAGGCGGAGGAAGAGATCTTCCTGGGGTCGATGTAGTTGTTCTCCAGACGCAGCGTCAATATGTTAGCGTCCTCGTCGTTCTCGGGGTCACAGAAAGCGTCCTCTGCAAAC

Function

NR:

description
extracellular matrix protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1723511 False 1137 lncRNA 0.46 4 93182431 93183959
TU1723514 False 1039 lncRNA 0.46 2 93182431 93183959
TU1723516 False 941 lncRNA 0.45 4 93182431 93183959
TU1723518 False 1235 lncRNA 0.47 4 93182431 93183959
TU1723519 False 1137 lncRNA 0.46 3 93182431 93183959
TU1723520 False 1115 lncRNA 0.47 5 93182431 93183959
TU1723521 True 1137 lncRNA 0.47 2 93182431 93183959

Neighbor

gene id symbol gene type direction distance location
LOC118940168 NA coding downstream 100159 93080347 ~ 93082272 (-)
LOC110494837 LOC106566237 coding downstream 128256 93042606 ~ 93054175 (-)
LOC118940167 LOC106566237 coding downstream 144072 93034702 ~ 93038359 (-)
LOC110494836 LOC106566241 coding downstream 251224 92902401 ~ 92931207 (-)
LOC118940649 NA coding downstream 349680 92832524 ~ 92832751 (-)
LOC110494849 LOC106566252 coding upstream 293486 93477445 ~ 93494951 (-)
LOC110493308 NA coding upstream 316241 93500200 ~ 93529938 (-)
LOC110494848 pdhb coding upstream 347731 93531690 ~ 93557343 (-)
LOC118940515 NA coding upstream 383856 93567815 ~ 93572808 (-)
LOC110494844 slmap coding upstream 394224 93577689 ~ 93690695 (-)
G1507007 NA non-coding downstream 44187 93136212 ~ 93138244 (-)
G1506998 NA non-coding downstream 62317 93112936 ~ 93120114 (-)
G1506997 NA non-coding downstream 69720 93112121 ~ 93112711 (-)
G1506996 NA non-coding downstream 70449 93111710 ~ 93111982 (-)
G1506975 NA non-coding downstream 123298 93058569 ~ 93059133 (-)
G1507033 NA non-coding upstream 5789 93189748 ~ 93193651 (-)
G1507057 NA non-coding upstream 56648 93240607 ~ 93242437 (-)
G1507087 LOC106566250 non-coding upstream 110347 93294306 ~ 93304401 (-)
G1507088 NA non-coding upstream 113565 93297524 ~ 93298309 (-)
G1507118 NA non-coding upstream 164658 93348617 ~ 93348917 (-)
G1506957 NA other downstream 93723 93085682 ~ 93088708 (-)
G1506965 NA other downstream 138066 93043731 ~ 93044365 (-)
G1506543 NA other downstream 318457 92863102 ~ 92863974 (-)
LOC110494834 NA other downstream 346007 92828908 ~ 92836438 (-)
G1506231 NA other downstream 683483 92494406 ~ 92498948 (-)
G1507093 NA other upstream 222334 93406293 ~ 93407212 (-)
G1507961 timp4 other upstream 980131 94164090 ~ 94198079 (-)
phf2 phf2 other upstream 1677667 94861445 ~ 94996238 (-)
G1508667 NA other upstream 1881686 95065645 ~ 95067363 (-)

Expression


Co-expression Network