G1507091


Basic Information

Item Value
gene id G1507091
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 93441541 ~ 93442315 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1723592
TTGAAGGAATATTTTAATGCAGTGTCATATAAACATGCCTGGCGTTTTGCATCAGTGTTGTTTCTGTGTGGAGGGTCGAGTCTTCAACCCAGTTCTGAACAGCCTAATCCTAGACCCTTAACATTGTTTTGGGGAAACAGACCTACTGCCGAGTTTAGCCCGGGATTAAATTCAAAGCATGTAGTTAGAATAACGCATAGGACTGCTGGCAATGCGCCTTTTTAAAGGAGGTCTCGGTTTAACAAGTTTGATATTTTAAGGTAAATTCTAATAGTGTTTGCCAGTAATGCCATCGCCGCTTTAAAAAGAAAGCACAGATAACATTCTATGGATAGAATCCCAGCCATCTCCTTTAAAAAGCACAGATAACATTCTATGGATAGAATCCCAGCCATCTCCTTTAAAAAGCACAGATAACATTCTATGGATAGAATCCCAGCCATTTCCTTTAAAAAGCACAGATAGCATTCTACAGATAGAATCCCAGCCATTGTCTTTGGAAAATATAGGCCTAGGTCATATTTTATTTACACATTTCCAGCCCTTTCTTAGTGCCCACATAATGTTGTTAGAGTTCTCATAAATCCAGTAGTCGAGGAACTGGTTCTTCTGGTTCTGCTGGTTCTGCTGCTGGTTCTGCC
>TU1723593
TTGAAGGAATATTTTAATGCAGTGTCATATAAACATGCCTGGCGTTTTGCATCAGTGTTGTTTCTGTGTGGAGGGTCGAGTCTTCAACCCAGTTCTGAACAGCCTAATCCTAGACCCTTAACATTGTTTTGGGGAAACAGACCTACTGCCGAGTTTAGCCCGGGATTAAATTCAAAGCATGTAGTTAGAATAACGCATAGGACTGCTGGCAATGCGCCTTTTTAAAGGAGGTCTCGGTTTAACAAGTTTGATATTTTAAGGTAAATTCTAATAGTGTTTGCCAGTAATGCCATCGCCGCTTTAAAAAGAAAGCACAGATAACATTCTATGGATAGAATCCCAGCCATCTCCTTTAAAAAGCACAGATAACATTCTATGGATAGAATCCCAGCCATCTCCTTTAAAAAGCACAGATAACATTCTATGGATAGAATCCCAGCCATCTCCTTTAAAAAGCACAGATAGCATTCTACAGATAGAATCCCAGCCATTGTCTTTGGAAAATATAGGCCTAGGTCATATTTTATTTACACATTTCCAGCCCTTTCTTAGTGCCCACATAATGTTGTTAGAGTTCTCATAAATCCAGTAGTCGAGGAACTGGTTCTTCTGGTTCTGCTGGTTCTGCTGCTGGTTCTGCC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1723592 False 641 lncRNA 0.40 3 93441541 93442315
TU1723593 True 641 lncRNA 0.40 4 93441541 93442315

Neighbor

gene id symbol gene type direction distance location
LOC118940168 NA coding downstream 359269 93080347 ~ 93082272 (-)
LOC110494837 LOC106566237 coding downstream 387366 93042606 ~ 93054175 (-)
LOC118940167 LOC106566237 coding downstream 403182 93034702 ~ 93038359 (-)
LOC110494836 LOC106566241 coding downstream 510334 92902401 ~ 92931207 (-)
LOC118940649 NA coding downstream 608790 92832524 ~ 92832751 (-)
LOC110494849 LOC106566252 coding upstream 35130 93477445 ~ 93494951 (-)
LOC110493308 NA coding upstream 57885 93500200 ~ 93529938 (-)
LOC110494848 pdhb coding upstream 89375 93531690 ~ 93557343 (-)
LOC118940515 NA coding upstream 125500 93567815 ~ 93572808 (-)
LOC110494844 slmap coding upstream 135868 93577689 ~ 93690695 (-)
G1507151 NA non-coding downstream 23464 93417088 ~ 93418077 (-)
G1507095 NA non-coding downstream 32858 93407749 ~ 93408683 (-)
G1507149 NA non-coding downstream 39287 93401457 ~ 93402254 (-)
G1507118 NA non-coding downstream 92624 93348617 ~ 93348917 (-)
G1507087 LOC106566250 non-coding downstream 137140 93294306 ~ 93304401 (-)
G1507196 NA non-coding upstream 83853 93526168 ~ 93527100 (-)
G1507224 NA non-coding upstream 149105 93591420 ~ 93592860 (-)
G1507227 NA non-coding upstream 161096 93603411 ~ 93607824 (-)
G1507234 NA non-coding upstream 189663 93631978 ~ 93633111 (-)
G1507093 NA other downstream 34329 93406293 ~ 93407212 (-)
G1506957 NA other downstream 352833 93085682 ~ 93088708 (-)
G1506965 NA other downstream 397176 93043731 ~ 93044365 (-)
G1506543 NA other downstream 577567 92863102 ~ 92863974 (-)
LOC110494834 NA other downstream 605117 92828908 ~ 92836438 (-)
G1507961 timp4 other upstream 721775 94164090 ~ 94198079 (-)
phf2 phf2 other upstream 1419311 94861445 ~ 94996238 (-)
G1508667 NA other upstream 1623330 95065645 ~ 95067363 (-)
G1508666 NA other upstream 1628667 95070982 ~ 95080563 (-)

Expression


Co-expression Network