G1507801


Basic Information

Item Value
gene id G1507801
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 93794585 ~ 93796469 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1724413
aaatttCTAGGATAAAATAACAATTTACatttttgcatacaatatagctaaATATTTcaatgatttattttatacagtctttgttgctcatctttatcaaggatgTCAATAATTACTGGACCTGACTGTACATTTCCTGTACATTCCTGAAAAGATAGACATTATTGAAATATGAACAATTAATAAGGGAAGCTTATGGAACCATAATGGACACAACAAATAGAAACAACAATTATCAAATAATTTAAAAAGGTAAAataattaaatataaaaaatagtTAATATATATGGAAATCTTTATCTTGATCAGAAAATCTATTCAGTCAGAATCAACTCGTTATAATCATCACCACATGGTTCAGTAGATTGTAGATGCAGAAGGGGGTGAAGGCTGGGGATGTAGGCAGGGGATGAAGGCTGGGGATGAGGTTAAACCGTTCATcaacacccagcaggtgatcatTAACACACCGCGGCCACCAGCCGTTTGTCAGCAGGGTGTCTCTCTTTAgactttttttcactaattggtcttttgaaaaATTATATTAGCTCTGACAAATATATGTGAagagatctgatgtgattggtcaaaagaccaattggcGGAAAAGAGATCAtatttgggctgcctgtgtaaacgcagccagtCTCCTGACTCTACATGGCTTCATCAGCCATTTAAAAGGTTGTCATGGTTATAGCTTGCTCTCGTTCGTCACGGCGCTGGTCGTCAAGGCCTTGACCCTGAGTACCCCCTCCTGGGCACAGCTGGCAGCCAGCACCCCGTCTCTCCTCCACAGACGTCCCTGAACCAGCCCTCTGCTGCCCcctggtggacacacacacacatacgttagCATGTGGGAAGACTAACACAGAGAACCAGTTGGAATGCTGCTGCCTGTAACTTTGCGTGTCCGCGTGCGTGAgtatatgtgtctctgtgtgtccatacctgtctctctatgtgtgtgtgtgtgtgtgtgagtgggtgggaagtgtgtgtgtgtgagtgggtagtgagtgtgtgtgtgtatatgtgtccaTACCAGTCCAAGAGCTCTCAGTCTCGTAGAGCATCCATTCGTCTGCCCTGAAGGTGTTGTGGAACCACATGGCATGGTCCAGAGAGGCTAAGAAAGTGGCGCGCTGCCCGGGGTAGGGCAGGAGAGCAGTGTCCAAGAACGAATAGTCTGACACATAGGCTGCCACACAGCAGTGGAGC
>TU1724414
aaatttCTAGGATAAAATAACAATTTACatttttgcatacaatatagctaaATATTTcaatgatttattttatacagtctttgttgctcatctttatcaaggatgTCAATAATTACTGGACCTGACTGTACATTTCCTGTACATTCCTGAAAAGATAGACATTATTGAAATATGAACAATTAATAAGGGAAGCTTATGGAACCATAATGGACACAACAAATAGAAACAACAATTATCAAATAATTTAAAAAGGTAAAataattaaatataaaaaatagtTAATATATATGGAAATCTTTATCTTGATCAGAAAATCTATTCAGTCAGAATCAACTCGTTATAATCATCACCACATGGTTCAGTAGATTGTAGATGCAGAAGGGGTTGAAGGCTGGGGATGGAGGCTGGGGATGAAGGCTGGGGATGTAGGCTGAAGTTGAAGGCTGGGGATGGAGGCTGGGGATGGAGGCAGGGGATGGAGGCTGAAGTTGAAGGATGGGGATGGAGGCTGGGGATGGAGGCAGGGGATGAAGGCTGGGGATGAGGTTAAACCGTTCATcaacacccagcaggtgatcatTAACACACCGCGGCCACCAGCCGTTTGTCAGCAGGGTGTCTCTCTTTAgactttttttcactaattggtcttttgaaaaATTATATTAGCTCTGACAAATATATGTGAagagatctgatgtgattggtcaaaagaccaattggcGGAAAAGAGATCAtatttgggctgcctgtgtaaacgcagccagtCTCCTGACTCTACATGGCTTCATCAGCCATTTAAAAGGTTGTCATGGTTATAGCTTGCTCTCGTTCGTCACGGCGCTGGTCGTCAAGGCCTTGACCCTGAGTACCCCCTCCTGGGCACAGCTGGCAGCCAGCACCCCGTCTCTCCTCCACAGACGTCCCTGAACCAGCCCTCTGCTGCCCcctggtggacacacacacacatacgttagCATGTGGGAAGACTAACACAGAGAACCAGTTGGAATGCTGCTGCCTGTAACTTTGCGTGTCCGCGTGCGTGAgtatatgtgtctctgtgtgtccatacctgtctctctatgtgtgtgtgtgtgtgtgtgagtgggtgggaagtgtgtgtgtgtgagtgggtagtgagtgtgtgtgtgtatatgtgtccaTACCAGTCCAAGAGCTCTCAGTCTCGTAGAGCATCCATTCGTCTGCCCTGAAGGTGTTGTGGAACCACATGGCATGGTCCAGAGAGGCTAAGAAAGTGGCGCGCTGCCCGGGGTAGGGCAGGAGAGCAGTGTCCAAGAACGAATAGTCTGACACATAGGCTGCCACACAGCAGTGGAGC
>TU1724415
aaatttCTAGGATAAAATAACAATTTACatttttgcatacaatatagctaaATATTTcaatgatttattttatacagtctttgttgctcatctttatcaaggatgTCAATAATTACTGGACCTGACTGTACATTTCCTGTACATTCCTGAAAAGATAGACATTATTGAAATATGAACAATTAATAAGGGAAGCTTATGGAACCATAATGGACACAACAAATAGAAACAACAATTATCAAATAATTTAAAAAGGTAAAataattaaatataaaaaatagtTAATATATATGGAAATCTTTATCTTGATCAGAAAATCTATTCAGTCAGAATCAACTCGTTATAATCATCACCACATGGTTCAGTAGATTGTAGATGCAGAAGGGGGTGAAGGCTGGGGATGTAGGCTGAAGTTGAAGGCTGGGGATGGAGACTGGGGATGGAGGCTGAAGTTGAAGGCTGGGATGGAGGCTGGGGATGTAGGCTGGGATGGAGGCTGGGGATGTAGGCTGAAGTTGAAGGCTGGGGATGTAGGCTGAAGTTGAAGGCTGGGATGGAGGCTGGGGATGGAGGCTGAAGTTGAAGGCTGGGATGGAGGCTGGGGATGTAGGCTGGGATGGAGGCTGGGGATGTAGGCTGAAGTTGAAGGCTGGGGATGTAGGCTGAAGTTGAAGGCTGGGATGGAGGCTGGGGATGGAGGCTGAAGTTGAAGGCTGGGGATGGAGACTGGGGATGGAGGCTGAAGTTGAAGGCTGGGGATGGAGGCTGAAGTTGAAGGCTGGGGATGGAGGCAGGGGATGGAGGCAGGGGATGGAGGCTGAAGTTGAAGGCTGGGGATGGAGGCTGGGGATGGAGGCAGGGGATGGAGGCTGAAGTTGAAGGCTGAAGTTGAAGGCTGGGGATGGAGGCTGGGGATGAAGGCTGGGGATGTAGGCTGAAGTTGAAGGCTGGGGATGGAGGCTGGGGATGGAGGCAGGGGATGGAGGCTGAAGTTGAAGGATGGGGATGGAGGCTGGGGATGGAGGCAGGGGATGAAGGCTGGGGATGAGGTTAAACCGTTCATcaacacccagcaggtgatcatTAACACACCGCGGCCACCAGCCGTTTGTCAGCAGGGTGTCTCTCTTTAgactttttttcactaattggtcttttgaaaaATTATATTAGCTCTGACAAATATATGTGAagagatctgatgtgattggtcaaaagaccaattggcGGAAAAGAGATCAtatttgggctgcctgtgtaaacgcagccagtCTCCTGACTCTACATGGCTTCATCAGCCATTTAAAAGGTTGTCATGGTTATAGCTTGCTCTCGTTCGTCACGGCGCTGGTCGTCAAGGCCTTGACCCTGAGTACCCCCTCCTGGGCACAGCTGGCAGCCAGCACCCCGTCTCTCCTCCACAGACGTCCCTGAACCAGCCCTCTGCTGCCCcctggtggacacacacacacatacgttagCATGTGGGAAGACTAACACAGAGAACCAGTTGGAATGCTGCTGCCTGTAACTTTGCGTGTCCGCGTGCGTGAgtatatgtgtctctgtgtgtccatacctgtctctctatgtgtgtgtgtgtgtgtgtgagtgggtgggaagtgtgtgtgtgtgagtgggtagtgagtgtgtgtgtgtatatgtgtccaTACCAGTCCAAGAGCTCTCAGTCTCGTAGAGCATCCATTCGTCTGCCCTGAAGGTGTTGTGGAACCACATGGCATGGTCCAGAGAGGCTAAGAAAGTGGCGCGCTGCCCGGGGTAGGGCAGGAGAGCAGTGTCCAAGAACGAATAGTCTGACACATAGGCTGCCACACAGCAGTGGAGC

Function

NR:

description
acyl-coenzyme A thioesterase 8

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1724413 False 1228 lncRNA 0.44 2 93794585 93796469
TU1724414 False 1345 lncRNA 0.46 2 93794585 93796469
TU1724415 True 1846 lncRNA 0.49 2 93794585 93796469

Neighbor

gene id symbol gene type direction distance location
LOC110494844 slmap coding downstream 103890 93577689 ~ 93690695 (-)
LOC118940515 NA coding downstream 221777 93567815 ~ 93572808 (-)
LOC110494848 pdhb coding downstream 237242 93531690 ~ 93557343 (-)
LOC110493308 NA coding downstream 291320 93500200 ~ 93529938 (-)
LOC110494849 LOC106566252 coding downstream 299634 93477445 ~ 93494951 (-)
LOC110494853 timp4 coding upstream 287400 94083869 ~ 94141578 (-)
LOC110494846 LOC106566275 coding upstream 460682 94257151 ~ 94321686 (-)
isy1 isy1 coding upstream 527252 94323721 ~ 94355073 (-)
LOC110494858 LOC106566283 coding upstream 567298 94363767 ~ 94392932 (-)
acad9 acad9 coding upstream 687812 94484281 ~ 94519204 (-)
G1507789 NA non-coding downstream 24720 93768853 ~ 93769865 (-)
G1507781 NA non-coding downstream 43365 93749582 ~ 93751220 (-)
G1507289 NA non-coding downstream 80408 93713914 ~ 93714177 (-)
G1507282 NA non-coding downstream 89981 93703964 ~ 93704604 (-)
G1507278 NA non-coding downstream 92001 93702272 ~ 93702584 (-)
G1507803 NA non-coding upstream 240 93796709 ~ 93799995 (-)
G1507832 LOC106592089 non-coding upstream 48150 93844619 ~ 93845119 (-)
G1507847 NA non-coding upstream 65578 93862047 ~ 93862492 (-)
G1507863 NA non-coding upstream 99014 93895483 ~ 93940753 (-)
G1507864 NA non-coding upstream 101533 93898002 ~ 93929366 (-)
G1507093 NA other downstream 387373 93406293 ~ 93407212 (-)
G1506957 NA other downstream 705877 93085682 ~ 93088708 (-)
G1506965 NA other downstream 750220 93043731 ~ 93044365 (-)
G1506543 NA other downstream 930611 92863102 ~ 92863974 (-)
G1507961 timp4 other upstream 367621 94164090 ~ 94198079 (-)
phf2 phf2 other upstream 1065157 94861445 ~ 94996238 (-)
G1508667 NA other upstream 1269176 95065645 ~ 95067363 (-)
G1508666 NA other upstream 1274513 95070982 ~ 95080563 (-)
LOC110493309 LOC106566266 other upstream 1364916 95160687 ~ 95164816 (-)

Expression


Co-expression Network