Gene
RNA
| Item | Value |
|---|---|
| gene id | G1507803 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 93796709 ~ 93799995 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1724419 | False | 472 | lncRNA | 0.41 | 2 | 93796709 | 93799995 |
| TU1724418 | True | 400 | lncRNA | 0.43 | 2 | 93796787 | 93799995 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494844 | slmap | coding | downstream | 106014 | 93577689 ~ 93690695 (-) |
| LOC118940515 | NA | coding | downstream | 223901 | 93567815 ~ 93572808 (-) |
| LOC110494848 | pdhb | coding | downstream | 239366 | 93531690 ~ 93557343 (-) |
| LOC110493308 | NA | coding | downstream | 293444 | 93500200 ~ 93529938 (-) |
| LOC110494849 | LOC106566252 | coding | downstream | 301758 | 93477445 ~ 93494951 (-) |
| LOC110494853 | timp4 | coding | upstream | 283874 | 94083869 ~ 94141578 (-) |
| LOC110494846 | LOC106566275 | coding | upstream | 457156 | 94257151 ~ 94321686 (-) |
| isy1 | isy1 | coding | upstream | 523726 | 94323721 ~ 94355073 (-) |
| LOC110494858 | LOC106566283 | coding | upstream | 563772 | 94363767 ~ 94392932 (-) |
| acad9 | acad9 | coding | upstream | 684286 | 94484281 ~ 94519204 (-) |
| G1507801 | NA | non-coding | downstream | 240 | 93794585 ~ 93796469 (-) |
| G1507789 | NA | non-coding | downstream | 26844 | 93768853 ~ 93769865 (-) |
| G1507781 | NA | non-coding | downstream | 45489 | 93749582 ~ 93751220 (-) |
| G1507289 | NA | non-coding | downstream | 82532 | 93713914 ~ 93714177 (-) |
| G1507282 | NA | non-coding | downstream | 92105 | 93703964 ~ 93704604 (-) |
| G1507832 | LOC106592089 | non-coding | upstream | 44624 | 93844619 ~ 93845119 (-) |
| G1507847 | NA | non-coding | upstream | 62052 | 93862047 ~ 93862492 (-) |
| G1507863 | NA | non-coding | upstream | 95488 | 93895483 ~ 93940753 (-) |
| G1507864 | NA | non-coding | upstream | 98007 | 93898002 ~ 93929366 (-) |
| G1507871 | NA | non-coding | upstream | 113944 | 93913939 ~ 93917726 (-) |
| G1507093 | NA | other | downstream | 389497 | 93406293 ~ 93407212 (-) |
| G1506957 | NA | other | downstream | 708001 | 93085682 ~ 93088708 (-) |
| G1506965 | NA | other | downstream | 752344 | 93043731 ~ 93044365 (-) |
| G1506543 | NA | other | downstream | 932735 | 92863102 ~ 92863974 (-) |
| G1507961 | timp4 | other | upstream | 364095 | 94164090 ~ 94198079 (-) |
| phf2 | phf2 | other | upstream | 1061631 | 94861445 ~ 94996238 (-) |
| G1508667 | NA | other | upstream | 1265650 | 95065645 ~ 95067363 (-) |
| G1508666 | NA | other | upstream | 1270987 | 95070982 ~ 95080563 (-) |
| LOC110493309 | LOC106566266 | other | upstream | 1361390 | 95160687 ~ 95164816 (-) |
