G1507832 (LOC106592089)


Basic Information

Item Value
gene id G1507832
gene name LOC106592089
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 93844619 ~ 93845119 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1724450
cgggtttgtgtgtgtgtttgtgtgtgtgtgtgtgggtttgtgtgtatgtgtgtttgtgggtttgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgggtgtgtttgtgtgtgtgtgtgtcggtttgtgtgtgtgtatgtgtgcgggtttgtgtgtgtgtgtttgtgtgtgtgtttgtgtgcgtgtgcatgtgtgcgtgtttgtgtgtgtgtttgtgtgtgcatgtgtatgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtttaccggaGATGACGGAGTCGTTCCAACGGTCAGGATCGTCTAGACGTCTGTTCTCCTTGTTCtcatctgactctctctctctttccttctccctctccttctctctctccgagGCTCCGAACAGCTCTTTCTCCACGCTGGCTGTATGCAACAGATGACCGTCGGACCGACGCTTCGGAGAAGAGTGTATCTCCTTTGGTTGGAA

Function

NR:

description
PREDICTED: phosphatase and actin regulator 3-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1724450 True 463 lncRNA 0.50 2 93844619 93845119

Neighbor

gene id symbol gene type direction distance location
LOC110494844 slmap coding downstream 153924 93577689 ~ 93690695 (-)
LOC118940515 NA coding downstream 271811 93567815 ~ 93572808 (-)
LOC110494848 pdhb coding downstream 287276 93531690 ~ 93557343 (-)
LOC110493308 NA coding downstream 341354 93500200 ~ 93529938 (-)
LOC110494849 LOC106566252 coding downstream 349668 93477445 ~ 93494951 (-)
LOC110494853 timp4 coding upstream 238750 94083869 ~ 94141578 (-)
LOC110494846 LOC106566275 coding upstream 412032 94257151 ~ 94321686 (-)
isy1 isy1 coding upstream 478602 94323721 ~ 94355073 (-)
LOC110494858 LOC106566283 coding upstream 518648 94363767 ~ 94392932 (-)
acad9 acad9 coding upstream 639162 94484281 ~ 94519204 (-)
G1507803 NA non-coding downstream 44624 93796709 ~ 93799995 (-)
G1507801 NA non-coding downstream 48150 93794585 ~ 93796469 (-)
G1507789 NA non-coding downstream 74754 93768853 ~ 93769865 (-)
G1507781 NA non-coding downstream 93399 93749582 ~ 93751220 (-)
G1507289 NA non-coding downstream 130442 93713914 ~ 93714177 (-)
G1507847 NA non-coding upstream 16928 93862047 ~ 93862492 (-)
G1507863 NA non-coding upstream 50364 93895483 ~ 93940753 (-)
G1507864 NA non-coding upstream 52883 93898002 ~ 93929366 (-)
G1507871 NA non-coding upstream 68820 93913939 ~ 93917726 (-)
G1507875 NA non-coding upstream 97847 93942966 ~ 93943240 (-)
G1507093 NA other downstream 437407 93406293 ~ 93407212 (-)
G1506957 NA other downstream 755911 93085682 ~ 93088708 (-)
G1506965 NA other downstream 800254 93043731 ~ 93044365 (-)
G1506543 NA other downstream 980645 92863102 ~ 92863974 (-)
G1507961 timp4 other upstream 318971 94164090 ~ 94198079 (-)
phf2 phf2 other upstream 1016507 94861445 ~ 94996238 (-)
G1508667 NA other upstream 1220526 95065645 ~ 95067363 (-)
G1508666 NA other upstream 1225863 95070982 ~ 95080563 (-)
LOC110493309 LOC106566266 other upstream 1316266 95160687 ~ 95164816 (-)

Expression


Co-expression Network