G1507864


Basic Information

Item Value
gene id G1507864
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 93898002 ~ 93929366 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1724491
ctattatattatgacagaccagctagatctactgtccttaatgtattatgacagaccagctagatctactgtctctattatattatgacagaccatctagatctactgtctctattatattatgacagaccagctagatctactgtctctattatattatgacagaccagctagatctactgtctctattatattatgacagaccagctagatctactgtctctattatattatgacagaccagctagatctactgtctctattatattatcacagaccagctagatctactgtctccattatattatgacagaccagccagatctactgtctctattatattatgacagaccagctagatctactgtctctattatattatgacagaccagctagatctactgtttgtattataatatgacagaccagctagatcgactgtccttaatgtattatgacagacgagctcgatctactatctctattatattatgacagaccagcaagatctactgtctctatattatgacagaccagctagatctactgtctctatattatgacaaaccagctagatctactgtctgtatgtttcaattttattatgacagaccagctagatctacgttctctattgtattatgacagaccagctagatctactgtccttaatgtattatgacagaccagctagatctactgtctctattatattatgacagaccagctagatctactgtctctactatattatggcagaccagctagatctgctgtctctattataatttgacagaccagctagatctactgtctgtatgtttcagttttattatgacagaccagctagatctactgtctctattgtattatgacagacgagctcgatctactgtctctattatattatgacagaccagctagatctactgtctctattataatatgacagaccagctagatctactgtagctattaaattatgactgaccagctagatctactgtctgtatgtttctatattatgacagaccatctagatctactgtctctattataatatgacagaccagctagatctaactgtctctattatattatgacagaccagctagatctactgtctatattgtacTATGAttgaccagctaaatctactgtccttattgtgctatgacagaccagccagatctgtctctattatattatgacagaccagctagatctactgtttgtattataatatgacagaccagctagatcgactgtctctattatattatgacagaccagctagatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1724491 True 1300 lncRNA 0.36 2 93898002 93929366

Neighbor

gene id symbol gene type direction distance location
LOC110494844 slmap coding downstream 207307 93577689 ~ 93690695 (-)
LOC118940515 NA coding downstream 325194 93567815 ~ 93572808 (-)
LOC110494848 pdhb coding downstream 340659 93531690 ~ 93557343 (-)
LOC110493308 NA coding downstream 394737 93500200 ~ 93529938 (-)
LOC110494849 LOC106566252 coding downstream 403051 93477445 ~ 93494951 (-)
LOC110494853 timp4 coding upstream 154503 94083869 ~ 94141578 (-)
LOC110494846 LOC106566275 coding upstream 327785 94257151 ~ 94321686 (-)
isy1 isy1 coding upstream 394355 94323721 ~ 94355073 (-)
LOC110494858 LOC106566283 coding upstream 434401 94363767 ~ 94392932 (-)
acad9 acad9 coding upstream 554915 94484281 ~ 94519204 (-)
G1507847 NA non-coding downstream 35510 93862047 ~ 93862492 (-)
G1507832 LOC106592089 non-coding downstream 52883 93844619 ~ 93845119 (-)
G1507803 NA non-coding downstream 98007 93796709 ~ 93799995 (-)
G1507801 NA non-coding downstream 101533 93794585 ~ 93796469 (-)
G1507789 NA non-coding downstream 128137 93768853 ~ 93769865 (-)
G1507875 NA non-coding upstream 13600 93942966 ~ 93943240 (-)
G1507988 NA non-coding upstream 223011 94152377 ~ 94152677 (-)
G1507961 timp4 non-coding upstream 252894 94164090 ~ 94198079 (-)
G1508008 NA non-coding upstream 256918 94186284 ~ 94188649 (-)
G1507093 NA other downstream 490790 93406293 ~ 93407212 (-)
G1506957 NA other downstream 809294 93085682 ~ 93088708 (-)
G1506965 NA other downstream 853637 93043731 ~ 93044365 (-)
G1506543 NA other downstream 1034028 92863102 ~ 92863974 (-)
phf2 phf2 other upstream 932260 94861445 ~ 94996238 (-)
G1508667 NA other upstream 1136279 95065645 ~ 95067363 (-)
G1508666 NA other upstream 1141616 95070982 ~ 95080563 (-)
LOC110493309 LOC106566266 other upstream 1232019 95160687 ~ 95164816 (-)

Expression


Co-expression Network