XLOC_003416 (FAM72B)


Basic Information

Item Value
gene id XLOC_003416
gene name FAM72B
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 21586335 ~ 21598527 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006683
TTCGACGCGGACGTAAACAAACGTAGCTTAGCAATCTAAGCCCAGTTGTAGCGATAGAGAATTTTACTGTAACTTAGTACAATGTGTTTATTTGCCGCCTAGATCTAAAAAGATCTGATATCATTAAAGGAGCTGCGTTTTGCTAGGAGCTGTACCCGAGAAAAGCTCACTTCTACAATGTCTACTTCAAATTTCAAGAATAAGTGCGTGACGCaaatcaactgtatatactgtgaCAGTCTGCTGTGTACCAGAGGGATGAAAGCAGTGCTTTTGGCTGATACGGAAATAGAGCTATTCTCAACCGACATACCACCAAATAGGACAGTTGATTTTGTGGCAAGCTGCTATTCCACTGAAAGCTGCAAATGCAAATTAAGAGATATTGCTTGTTTGAAATGTGGGAATGTTGTGGGATATCACGTGGTGGCCCCATGCAAACCCTGCTTGCTGTCCTGTAACAATGGTCACTTCTGGATGTTCAACAGTGAGGCCGTGTCCACCATCAATAGACTGGATGCAACAGGGCAGAACCTGCTCTTATGGGGAGATCTTCCAGAACTTGAAGACAGTGATGACGAGAGCTTGGAAAGTTTCTCAGAAGAAGAGTACCTCAGATAGAAACACAGGCCAAAACAAGTAGACTCTGACGGTAGCGAACTAGTTTGCTTTCACAGATCTCCGTTTAAAGCACAGTGAATTGACTTTAGCTGACTGGGAAAAGGCAGAAAATGACTTTACCTTCTAGCTTGTTTCATATTCATGCTTCTGCTATTTTCTTTCGGCATTCATCTCATATTAATTTAAGTATGTCAGAGTGCCACTACCAAAGAAAAAAAGTGTCCGTTTTCTTTGCTTTGCGGTTGCAGTAGCACAAAACATGGTGATGGGACTTTAAGACTTACAAAAGTATCCTTGTGTGTCTATACAGGATTCACAATGGTTTCAGGCTGTTCCAGAAGAATAACAGCAGTGTTAATTGAGGTGTTAAAACAGCTTGTTTGCTCCAGTACCAATGCAGTTTTTGGAAGGCGATCAAATGGCTACACTGCTAGTcaaaaatatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagagtaaaTAACCGACATACCATGTTTTAATGGTTTATTAGTATATATCTGcatgaaaaaaaatgacaaacagtCACTTCAAGACATGATGGATATCATTACTTATAATTGATATATTTTGGGCCAGATTTGCTAACAAAATGGATTTTTGCTAGTTACCCATTAGAGTTTCCTTAACAGGCACAAAATATATAGGAGGACAGTGTTTAGAGTCTGTGTGAACAAAGTTgctaagactttttattttagtatgctgATGTATGTACTTTAAACCCAAACCGAATACTGAGTAGGGGCAGGGCTTTCTTGTTCCGCATTAATCCCTCGAAGCAAAATAATGCTAAGATGGGCATGATTAAGAATTGAGGTTATATGAAATGTATGTAAATGATCTGCTGCATtcgtgtttctcaaccatgttcctggaggaccaccagctcttcACATTTTCCTTGttttcttaaccaaacacacctgattcagatcaacagctcattagcagagattgaaaggcctgtaatgggtgtgacagaccaAGGAAACCtccaaaacatgcagttttgGTGGTCCcctaggaacatggttgagaaacactgatttaattcCTGCGGTTGTCAGTAGATCACTCCCAAAACGTTCCACTTACATCAGTAATTTTTCTGAAATTTAACTCTCTTGCGTATTTGCTCTGTTTTAGTAAATCTGCTCTTGAGGGTGTTTACACTTGTAGTTTAGTACTCATGGTTTGTTTTTTAGTCTAGACCACAATAGAAAATAACACATTTAGATTCGCCTAGCATTCACATTATTCGTGTTTAGACCATACCTAAAGATACCAAAAAATgcttttatgacatgtattttgCGAAAGATTTCACCAAACATACAAAACATTGCTGTGAGCTGGGCTAAATGTGCTTGCTGCTTGTGTGTacatggtgtgtgtgtgggttttttttCGCAGTTCTCCAAGATCTGCTGCAAGAAAATGCGTTTCTGATGCCTTCTGAACTGTAATGGGCAGTTTATGCAGTTTATGCTTTTCATAGTCGCATCTTGTGATGTCATGTACTGTTTTGGGGTCGTTTAGATGGTTTATGGTCCATGTGTTTATATTTCAGTCTAACCACAACAGTTTGTTTGGAAGTGGACGGAGAGCTAGCTTTTCAGTGGTTTTGGTTCATTTATTCTCATGAATTATGAACAGAACTATCACATCGAGGTTTATTTTAATCTAGAGCTGGGCGATCAATCAAAAAGTAATCGATATTGACATTCAAAACCTGTAATTGATTACATTTTTCCaggttgatttatttaaaaaatatatattattattattttccctaaATATTTTCCCTACCGTGTGTCCCTGCTCTGTTAAgcctttatttttatacaaaaagtAGAATGACGGACCCATTTTTGAGCTGTAATTTGCACAACATTGACGATGATTGCAAGCTGCGCCAGAGAAGCCTAGAGgcggcatattttccattaaataaaattttttatttacattcaaatatttgtttacagaagatacAAGAAAAGCTTATATTATTTACAGGAGatacaaaagttattttatttagaagagatactgcttattttcttttttttattatgaaaacattaaaaataatttactttgtttacaaaagttatttattttcactttttataagAAAATAGTGACCGATGGTTTAGGCAACATgtcttttataaaataatataaaattttataatttaataaatgaattgttctttttttatttaataattttatttatttatttattacagattAATAGATTGTgttttagggctgggtgataaatcGAAAAGTAATTAAAATCGAGATTCAGAACCTAAAATCGTTCTAACTTTTCCAGGTGGAGTCATATgatcaggcccgtgcagagactgtcagaagggcatgtgcaggatacattttttgGAGAGCGGGGTGGATGGTTGTTGTTGCTTGCGTTCTGAtcagtggtgttgtcgcgcgtgtactgTAAGCTACGGGAAGGGGGGGTGGAGGGTGGGGGAGCACGCGTACTCGAGAGCGGTGTTgccgcgcgcctactgaagagcggtaggggggtgtcgcgggggcacttttgatcgtttcgaagggcactttctatccaagactaaaaagggcatgtgcactgcacaggttgagccctatgtgtgcacgtgcctgcatgTGATCCCGCTCTGTTTATTCTTCTGTGTCGAGACCCCTTGTCCTGGCTGACTACAAAGTGCAATACTTAGCACAATGCAATACTTAGCGCAATGCATAGTGGAAGCTTTGTGGTTTGGTATCTTTGTTTAGTGTGGTCGGGGCCGAGAGAGATGTTTACAAGTGTCAATTCTCATAGAGGAGCTCCATATgaagacttttgttttgtgtttaccttatgattaaagttattgCACGACCGCCAGtgcccgcctctgaatgagcgagttcaAGCTACTTTTACAGTTAAGGTactgttcagaaaaaaacaaacacttatttgcttcttttaacatgaaaaatatagaaaatgctttattttttttccaaaagtgcaagttatttattttcactttttttataagaaaaaaagtgaCTGTTGTTTTAGGCAAAGTGTGTTTTAATTAAGGTTGTTTAACTTAGATGTTCAATAAATGATCATAGATAGTGGATAGTGCATGTTTCCTTAAGTCAAGTAACGCTCCCTTCCCTGcgggcacaggatgtcaacatatTGTCAAATGGAAATCGGGTttatgtcagaacccaacgtcaatgtccaacctaaaatcaaccaaatatcaacgtcttatCATTtgcaccttgacgttgtgtggacgttaccactgtgacatctatcagatgttgagtttttgatcactttccaacacaacctaaaaccaaccaaatatcaatgtaaaaaaaacatctttagatGTTGGCAAGACATTGCGTTTTGGTCACCCAACCCAACACTAACAtcttataatgttgtgtgcctgctgggttcaTTCAAAAAGCCCGAACTTgcaatatgtgagcatatttactgtacaaaatatcaagataataaatcaaataatcgttcaataattgtaatcgagttaaaatgttcaattaatcgaaatTTTGATTTTAtgccaaatcgcccagctctAATGTGTTTCCTTCAATCATTTCAAAgccaagtaatgcacccttcattcaaaaatctctcacttgtaatatgtgagcatgtttactgtacaaaacttgtccaTGAACTATGAGGGAAATGATAATCGTTTAATAACTGTAATCAAgtcaaaatgttcaattaattgaggTTTTGATTTTAGGCAAAATTTCCCAGCTCTATTTtaatcaaaccaaaacaaaagtgtGAGCAAAACCACTGGAAACATGGTTTTTCCTTCATTGTCCTCCTTGTGTATTGTCTGTAGTTTGATTTTGGTTCTGATTTAAAGTGGTACAAAATGACTTGGCAGCTTTGAGTAGAGCTTTTTGCGTTCCCGTTTTGTCATATTATGGCATGATTTTCATACTTTGGTACTTACTGAcgattctttgtttttgttttctttataatCTGCATCTCCAGTTATGTTTCACTGTCATGAGAAGAGATGAAAAATCCATAGACAATAATCCTTATGACACTTTGACATACTGaactaatcttttatttttttggaagatAACGTTTTGCATCGTCCATTTATTTTAAACGATGACACGATGTAATCATTCAGTAGCAATTTTCTTCAGTCCAGTTTACCATTTCACTGTGTGACTACTGATTTTTCCTAGTTCGTTTTTGAAATCTTTCAAAAATAAGAAGACTTTCATGCCTACTTTAAATGTCTTAGAGCAACATATTACGTCATGTTGTATTGAAGGTTGCATTTTTTCCAGTAAAAACATCAGCAAGAAGAATAAACAACCACTATTGTGATAGCTTTCAGGTGTAGCATTTTTAGACGCTGGCTCTTTTTATGCCTTGAAGCGAACTTTAGTATGCATTTATGACCAAAATGAGATGAAAATatgttttgcattttaacttaTTAACAGAGGATTTATTTGATTTAAGTTATGTATGTtttgaatgtatttattaacagaCATGATACTGTATTTATACTGACATGATTTCGTTTGCGCCATGTGAGGATGAAAAAAAACAACCGTTTGTAAACTTTTATTCTGCACTGACAGTATGTTGTTGGTTTAAACTTTGGGTTATTTTGTATGCTGAATGTCTTgatattaaagtttttaaatgtgAA
>TCONS_00006684
GTGGGAATGTTGTGGGATATCACGTGGTGGCCCCATGCAAACCCTGCTTGCTGTCCTGTAACAATGGTCACTTCTGGATGTTCAACAGTGAGGCCGTGTCCACCATCAATAGACTGGATGCAACAGGGCAGAACCTGCTCTTATGGGGAGATCTTCCAGAACTTGAAGACAGTGATGACGAGAGCTTGGAAAGTTTCTCAGAAGAAGAGTACCTCAGATAGAAACACAGGCCAAAACAAGTAGACTCTGACGTTATGTTTCACTGTCATGAGAAGAGATGAAAAATCCATAGACAATAATCCTTATGACACTTTGACATACTGaactaatcttttatttttttggaagatAACGTTTTGCATCGTCCATTTATTTTAAACGATGACACGATGTAATCATTCAGTAGCAATTTTCTTCAGTCCAGTTTACCATTTCACTGTGTGACTACTGATTTTTCCTAGTTCGTTTTTGAAATCTTTCAAAAATAAGAAGACTTTCATGCCTACTTTAAATGTCTTAGAGCAACATATTACGTCATGTTGTATTGAAGGTTGCATTTTTTCCAGTAAAAACATCAGCAAGAAGAATAAACAACCACTATTGTGATAGCTTTCAGGTGTAGCATTTTTAGACGCTGGCTCTTTTTATGCCTTGAAGCGAACTTTAGTATGCATTTATGACCAAAATGAGATGAAAATatgttttgcattttaacttaTTAACAGAGGATTTATTTGATTTAAGTTATGTATGTtttgaatgtatttattaacagaCATGATACTGTATTTATACTGACATGATTTCGTTTGCGCCATGTG

Function

symbol description
fam72b Located in cytosol and intracellular membrane-bounded organelle.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000070621

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006683 False 5590 mRNA 0.36 5 21586335 21598527
TCONS_00006684 True 821 mRNA 0.37 3 21587950 21598408

Neighbor

gene id symbol gene type direction distance location
XLOC_003415 NA coding upstream 177501 21406687 ~ 21408834 (+)
XLOC_003414 NA coding upstream 279573 21302712 ~ 21306762 (+)
XLOC_003413 BX321912.1 coding upstream 399651 21185469 ~ 21186684 (+)
XLOC_003412 il10 coding upstream 446832 21137948 ~ 21139503 (+)
XLOC_003411 il19l coding upstream 486552 21096339 ~ 21099783 (+)
XLOC_003417 NA coding downstream 14144 21612671 ~ 21759025 (+)
XLOC_003418 CR812468.2 coding downstream 51995 21650522 ~ 21650638 (+)
XLOC_003419 NA coding downstream 304150 21902677 ~ 21903694 (+)
XLOC_003420 foxp4 coding downstream 311816 21910343 ~ 22094392 (+)
XLOC_003421 MDFI coding downstream 511360 22109887 ~ 22169026 (+)
XLOC_003369 CR854846.2 misc upstream 5463253 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 8874339 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 8892072 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 8900736 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 8906307 12679732 ~ 12680028 (+)
XLOC_003409 CU459075.1 non-coding upstream 533991 21052228 ~ 21052344 (+)
XLOC_003407 NA non-coding upstream 656011 20928241 ~ 20930324 (+)
XLOC_003423 BX537143.1 non-coding downstream 998199 22596726 ~ 22599593 (+)
XLOC_003425 CU861893.1 non-coding downstream 1115488 22714015 ~ 22714131 (+)

Expression


Co-expression Network