G1508672


Basic Information

Item Value
gene id G1508672
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 95086626 ~ 95088421 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1725473
AGGGTCTCTGGGCTGCAGTTCTACTATAGTTATCCCTCTGTTCTTGTTgctgttactgtctctgtcttCTGCCTCTGTTCACATTCCAGGTCCTGTAGACGCTCATCAGAACAGAGTCAGGGTTCTGTATCAACAGATCTTCCTCCAGAGCTAGGTGAAGGTATCAGTCCAGGGTTCTGTATCAACAGATCTTCCTCCAGAGCTAGGTGAAGGTATCAGTCCAGGGTTCTGTATCAACAGATCTTCCTCCAGATCTAGCTGAAGGTATCAGTCCAGGGTTCTGTATCAACAGATCTTCCTCCAGATCTAGCTGAAGGTATCAGTCCAGGGTTCTGTATCAACAGATCTTCCTCCAGATCTAGCTGAAGGTATCAGTCACCAGGGTTCTGTATCAACAGATCTTCCTCCagagctaactctctctctccagtgatggTGCTTTTCAGAGGAGCTgatctgttctgtgctgttctgttatGCAAATCTCTGTAGTTTGTTAGAACAGGTATTAGAGACAAACTGGTTCTGTTGTGCTCCTCTCTGTAGTCTGTTTGATCAGGTCTAACTGAGGAACTGCTACTGAGATGAGGAAACACACAGCCTGTAGCCAGCAGCACTCATGCAAATTagagaacaaggagagagagagagagagagagagagagagagagagagagagaggagtaggcagtgtgagagcgagagagagagagagaggcagaaaaagagagagcggaAGGGTGGGGGGATAGTATGATAGCACTGTTAGATAAAGAGTTTCAGAGCAGAAGTTGACAATATGCTGAGAAACAGTCTAGTAGCGTGAAACATAGATAGACAGGTAGAGTATGAAAGGCAGAAGAGATTTTAAAAGACAGAGAAAGATTGCAAAAGTGAAAATGTCAACAACAACCCTGACAAAATGAGGAAGTACAGAGTAGAGTAAAGTGACAGGCTCTGAGGTTTACCTTTAACTGTAGCTACATCCCTCCCAGCCATCTCAGCCAACCTCGGCTTACCTTTAACTGTAGATACATCCCTCCCAGCCATCTCAGCCAACCTCGGCTTACCTTTAACTGTAGCTACATCCCTCCCAGCCATCTCAGCCAACCTCGGCTTACCTTTAACTGTAGCCAACTCattctacagtatctacctctacctcatTCTACAGTATCTACTTCTATATAACTCTCTCTACCTCattctacagtatctacctctatATAGCTCTACCTCTAACTCATTCTACAGTAGGTACCTCTATACAACTCTACCTCATTCTACAATATCTACCTCTATATAACTCTACCTCATTCAACAGTATCTACCTCTATATAACTCTACCTCTAACTCattctacagtatctacctctaaCTCATTCTATAGTATCTACTTCTATataactctacctctacctcattctacagtatctacctctatATAACTCTACAATGACTCAGTACCTGTCCTGTTCCAGCCTGCTCTACCTCCATAACAcattctccctctcactctccctctccctttctcgccctctccctctctacctcctccctctccctctctacctcctccctctctctcacacaccctctatccctctctcgccctctcttgcactctccctctctatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1725473 True 1638 lncRNA 0.45 3 95086626 95088421

Neighbor

gene id symbol gene type direction distance location
cstf1 cstf1 coding downstream 39160 95028386 ~ 95047466 (-)
phf2 phf2 coding downstream 90388 94861445 ~ 94996238 (-)
LOC118940516 NA coding downstream 226546 94851926 ~ 94861352 (-)
acad9 acad9 coding downstream 567422 94484281 ~ 94519204 (-)
LOC110494858 LOC106566283 coding downstream 693694 94363767 ~ 94392932 (-)
LOC110493309 LOC106566266 coding upstream 72266 95160687 ~ 95164816 (-)
G1508665 NA non-coding downstream 25080 95061345 ~ 95061546 (-)
G1508663 NA non-coding downstream 29556 95056861 ~ 95057070 (-)
G1508662 NA non-coding downstream 30548 95055877 ~ 95056078 (-)
G1508653 NA non-coding downstream 45659 95039763 ~ 95040967 (-)
G1508650 NA non-coding downstream 59170 95026554 ~ 95027456 (-)
G1508679 NA non-coding upstream 15022 95103443 ~ 95103686 (-)
G1508680 NA non-coding upstream 15981 95104402 ~ 95104810 (-)
G1508682 NA non-coding upstream 23504 95111925 ~ 95113736 (-)
G1508689 NA non-coding upstream 33235 95121656 ~ 95121992 (-)
G1508690 NA non-coding upstream 33812 95122233 ~ 95122438 (-)
G1508666 NA other downstream 6063 95070982 ~ 95080563 (-)
G1508667 NA other downstream 19263 95065645 ~ 95067363 (-)
G1507961 timp4 other downstream 888547 94164090 ~ 94198079 (-)
LOC110493308 NA other downstream 1556688 93500200 ~ 93529938 (-)

Expression


Co-expression Network