Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118941224 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 5267148 ~ 5267312 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOC569167 protein, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC118941224 | True | 165 | mRNA | 0.45 | 1 | 5267148 | 5267312 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110511156 | LOC106575856 | coding | downstream | 41863 | 5217838 ~ 5225285 (-) |
| LOC110514545 | LOC106574716 | coding | downstream | 78687 | 5068836 ~ 5188461 (-) |
| LOC110528886 | LOC106592258 | coding | downstream | 169810 | 4956450 ~ 5097338 (-) |
| LOC110528776 | NA | coding | downstream | 411611 | 4834342 ~ 4855537 (-) |
| LOC110516780 | NA | coding | downstream | 434477 | 4810980 ~ 4833702 (-) |
| LOC110517117 | NA | coding | upstream | 14101 | 5281413 ~ 5294676 (-) |
| LOC110513142 | NA | coding | upstream | 32160 | 5299472 ~ 5341735 (-) |
| LOC118941023 | LOC106575981 | coding | upstream | 109276 | 5376588 ~ 5388693 (-) |
| LOC118941221 | NA | coding | upstream | 182644 | 5408991 ~ 5718855 (-) |
| LOC118941223 | NA | coding | upstream | 199801 | 5467113 ~ 5467302 (-) |
| G1512888 | NA | non-coding | downstream | 1583 | 5264490 ~ 5265565 (-) |
| G1512610 | LOC106592258 | non-coding | downstream | 17520 | 5245875 ~ 5249628 (-) |
| G1512854 | NA | non-coding | downstream | 19312 | 5246909 ~ 5247836 (-) |
| G1512855 | NA | non-coding | downstream | 93669 | 5080940 ~ 5173479 (-) |
| G1512560 | LOC106574716 | non-coding | upstream | 14135 | 5281447 ~ 5321420 (-) |
| G1512661 | NA | non-coding | upstream | 105558 | 5372870 ~ 5373663 (-) |
| LOC110517120 | LOC106576008 | non-coding | upstream | 107851 | 5229992 ~ 5652429 (-) |
| G1512628 | NA | non-coding | upstream | 180746 | 5448058 ~ 5466020 (-) |
| G1512914 | NA | non-coding | upstream | 189875 | 5457187 ~ 5459138 (-) |
| G1512635 | NA | other | downstream | 425354 | 4835070 ~ 4841794 (-) |
| G1510865 | NA | other | downstream | 2061225 | 3205375 ~ 3205923 (-) |
| G1510645 | NA | other | downstream | 2387771 | 2878653 ~ 2879377 (-) |
| LOC110517047 | LOC106574932 | other | downstream | 2927592 | 1803391 ~ 2339987 (-) |
| LOC110495376 | pcdh17 | other | downstream | 4101726 | 1004783 ~ 1165747 (-) |
| LOC110515909 | LOC106592258 | other | upstream | 530476 | 5493050 ~ 5870220 (-) |
| LOC110495369 | lims1 | other | upstream | 642087 | 5898100 ~ 5913381 (-) |
| LOC118941020 | LOC106595074 | other | upstream | 691479 | 5956579 ~ 5961996 (-) |
