Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118941221 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 5408991 ~ 5718855 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005037553.1 | False | 191 | mRNA | 0.46 | 1 | 5449956 | 5450146 |
| TU1730673 | True | 971 | TUCP | 0.47 | 3 | 5408991 | 5718855 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941023 | LOC106575981 | coding | downstream | 61263 | 5376588 ~ 5388693 (-) |
| LOC110513142 | NA | coding | downstream | 108221 | 5299472 ~ 5341735 (-) |
| LOC110517117 | NA | coding | downstream | 155280 | 5281413 ~ 5294676 (-) |
| LOC118941224 | NA | coding | downstream | 182644 | 5267148 ~ 5267312 (-) |
| LOC110511156 | LOC106575856 | coding | downstream | 224671 | 5217838 ~ 5225285 (-) |
| LOC118941223 | NA | coding | upstream | 16967 | 5467113 ~ 5467302 (-) |
| LOC110495597 | NA | coding | upstream | 26801 | 5476947 ~ 5490742 (-) |
| LOC118941028 | NA | coding | upstream | 136407 | 5586553 ~ 5589573 (-) |
| LOC110519533 | LOC106575981 | coding | upstream | 227550 | 5677696 ~ 5697067 (-) |
| LOC110510709 | LOC106575793 | coding | upstream | 290867 | 5741013 ~ 5776325 (-) |
| LOC110517120 | LOC106576008 | non-coding | downstream | 31735 | 5229992 ~ 5652429 (-) |
| G1512661 | NA | non-coding | downstream | 76293 | 5372870 ~ 5373663 (-) |
| G1512560 | LOC106574716 | non-coding | downstream | 128536 | 5281447 ~ 5321420 (-) |
| G1512888 | NA | non-coding | downstream | 184391 | 5264490 ~ 5265565 (-) |
| G1512610 | LOC106592258 | non-coding | downstream | 200328 | 5245875 ~ 5249628 (-) |
| G1512914 | NA | non-coding | upstream | 7041 | 5457187 ~ 5459138 (-) |
| LOC110515909 | LOC106592258 | non-coding | upstream | 42904 | 5493050 ~ 5870220 (-) |
| G1512931 | NA | non-coding | upstream | 58005 | 5508151 ~ 5508646 (-) |
| G1512934 | NA | non-coding | upstream | 75792 | 5525938 ~ 5526343 (-) |
| G1512938 | NA | non-coding | upstream | 95715 | 5545861 ~ 5549418 (-) |
| G1512635 | NA | other | downstream | 608162 | 4835070 ~ 4841794 (-) |
| G1510865 | NA | other | downstream | 2244033 | 3205375 ~ 3205923 (-) |
| G1510645 | NA | other | downstream | 2570579 | 2878653 ~ 2879377 (-) |
| LOC110517047 | LOC106574932 | other | downstream | 3110400 | 1803391 ~ 2339987 (-) |
| LOC110495369 | lims1 | other | upstream | 459253 | 5898100 ~ 5913381 (-) |
| LOC118941020 | LOC106595074 | other | upstream | 508645 | 5956579 ~ 5961996 (-) |
| G1512558 | NA | other | upstream | 535133 | 5985279 ~ 5987523 (-) |
| LOC110495371 | LOC106574843 | other | upstream | 563711 | 6006457 ~ 6020888 (-) |
| LOC110527262 | LOC106592870 | coding | upstream | 158572 | 5877427 ~ 5890782 (-) |
| G1512854 | NA | non-coding | downstream | 161155 | 5246909 ~ 5247836 (-) |
| G1512622 | LOC106594033 | non-coding | upstream | 38057 | 5756912 ~ 5760137 (-) |
| G1512636 | NA | non-coding | upstream | 52612 | 5771467 ~ 5776358 (-) |
| G1513004 | NA | non-coding | upstream | 94316 | 5813171 ~ 5840471 (-) |
| G1512647 | NA | non-coding | upstream | 136209 | 5855064 ~ 5877705 (-) |
