Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118941029 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 5947542 ~ 5948154 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005037320.1 | True | 305 | mRNA | 0.53 | 3 | 5947542 | 5948154 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941026 | NA | coding | upstream | 464 | 5946747 ~ 5947078 (+) |
| LOC110510710 | LOC106575389 | coding | upstream | 207931 | 5152929 ~ 5739611 (+) |
| LOC110519537 | LOC106592870 | coding | upstream | 239076 | 5704751 ~ 5708466 (+) |
| LOC110513970 | LOC106575958 | coding | upstream | 244572 | 5461902 ~ 5702970 (+) |
| LOC110495587 | LOC106592870 | coding | upstream | 310352 | 5526363 ~ 5637190 (+) |
| LOC110519329 | atp4b | coding | downstream | 53590 | 6001744 ~ 6007442 (+) |
| LOC118941024 | dcun1d2 | coding | downstream | 101248 | 5998183 ~ 6065189 (+) |
| LOC110511044 | adprhl1 | coding | downstream | 122620 | 6070774 ~ 6082183 (+) |
| LOC110527156 | LOC106575911 | coding | downstream | 134139 | 6082293 ~ 6096601 (+) |
| LOC118941019 | tgfbrap1 | coding | downstream | 198512 | 6146666 ~ 6157976 (+) |
| G1512440 | NA | non-coding | upstream | 19980 | 5926894 ~ 5927562 (+) |
| G1512413 | NA | non-coding | upstream | 32624 | 5914695 ~ 5914918 (+) |
| G1511880 | NA | non-coding | upstream | 48157 | 5898285 ~ 5899385 (+) |
| G1511942 | NA | non-coding | upstream | 49533 | 5897735 ~ 5898009 (+) |
| G1512410 | NA | non-coding | upstream | 50729 | 5895484 ~ 5896813 (+) |
| G1512443 | NA | non-coding | downstream | 2517 | 5950671 ~ 5950935 (+) |
| G1512448 | NA | non-coding | downstream | 9269 | 5957423 ~ 5958678 (+) |
| G1512453 | NA | non-coding | downstream | 19971 | 5968125 ~ 5969224 (+) |
| G1512454 | NA | non-coding | downstream | 29175 | 5977329 ~ 5978539 (+) |
| G1512457 | NA | non-coding | downstream | 39181 | 5987335 ~ 5998317 (+) |
| G1512309 | NA | other | upstream | 334506 | 5607908 ~ 5613036 (+) |
| G1512205 | NA | other | upstream | 704115 | 5242734 ~ 5243427 (+) |
| G1512182 | NA | other | upstream | 841454 | 5104087 ~ 5106088 (+) |
| LOC110495595 | LOC106574881 | other | upstream | 921212 | 4895914 ~ 5043592 (+) |
| LOC110518779 | dis3 | other | downstream | 229686 | 6172823 ~ 6188926 (+) |
| LOC110495361 | LOC106575795 | other | downstream | 450609 | 6398763 ~ 6403517 (+) |
| LOC110496964 | LOC106594657 | other | downstream | 492698 | 6404433 ~ 6459931 (+) |
| LOC110514219 | LOC106594890 | other | downstream | 602491 | 6493403 ~ 6573608 (+) |
| LOC110516612 | LOC106574917 | other | downstream | 760505 | 6705632 ~ 6710286 (+) |
