mzt1


Basic Information

Item Value
gene id mzt1
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 6201385 ~ 6203248 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021560766.2
AACGCTCCAAATTTACATTGACGTCACTTCCTTTCGCTTGTGTGGTCGTTAGTAAGCTAACTAGCAAATTATATACTCATGGTAGACTTTATTAACAAATGTACTATTTCTAATTTATCCAAATGACGGGGTTGTGATAGTAGAAGTATTTTTGTAAATCAGCTTGAACTGTTGAAGTTGCTGTTGAGTTAATCTCGGAGGTCCCACACGAACTGATTATGGCTAGCAGTGCTAATGCTAACAACATGAATGCTGTCCGAGAAACGATGGATGTGCTGCTGGAGATCTCTAGGCTATTGAACACAGGACTGGACATGGaatctctgtctatctgtgtcaGGCTGTGTGAGCAGGGCATCAACCCAGAGGCCCTGTCCTCTGTCATCAAGGAGCTACGTAAAGCCTCCGATTCACTAAAAGCCTCTGACAACTGAAGATCTGAGACTGATCCCAACAAAGCAATTCTGCTGAGCGGAAGTCTTTTCACGCAGTCAAGTTTCACAATATTGCCAAATAGTGAGCGTCTATTACCCTGACCTATTCCTCGTGCCTCTGGATTTGATCCCTGGCTTCATTTGAAGAAAAATGGTGTGTGTTTAACATTTGGTCTGGCAACATCAGTGGCCAATTCTCCTTGTGTTCCTGTCATCAGCTTGGTGTGCAATCTGACAATATGAATGACTGCAATGCCCTGATATCCAATGTTTcagtacccctccctccctcaatcatATAGGTTGTCAGTTCAGTCGTCTTTCTTCTGACTGAAGGAAACCTAATGATTGGCACTCCCCCGTCATCACACAGTGCTACAATGATGGGTTGTTTTCCATTCCTTCATGGCTTTTTGgacgtgtaaaaaaaaaagtcttATTTATTGCGAATTGTGTGTAGTTTTATATGAATTTAATGTCCGTTTTTTTCCTTCAATGTCTGGCATGTCAAagttatttttttttctctctctctcgaagtGTCCAGGGTTGTCAATGATGGATGGAACTCAATATTAAAAGTAGTTGCATTTTATATCCA
>TU1730579
CCTTTCGCTTGTGTGGTCGTTAGTAAGCTAACTAGCAAATTATATACTCATGGTAGACTTTATTAACAAATGTACTATTTCTAATTTATCCAAATGACGGGGTTGTGATAGTAGAAGTATTTTTGTAAATCAGCTTGAACTGTTGAAGTTGCTGTTGAGTTAATCTCGGAGGTCCCACACGAACTGATTATGGCTAGCAGTGCTAATGCTAACAACATGAATGCTGTCCGAGAAACGATGGATGTGCTGCTGGAGATCTCTAGGCTATTGAACACAGGACTGGACATGGaatctctgtctatctgtgtcaGGCTGTGTGAGCAGGGCATCAACCCAGAGGCCCTGTCCTCTGTCATCAAGGAGCTACGTAAAGCCTCCGATTCACTAAAAGCCTCTGACAACTGAAGATCTGAGACTGATCCCAACAAAGCAATTCTGCTGAGCGGAAGTCTTTTCACGCAGTCAAGTTTCACAATATTGCCAAATAGTGAGCGTCTATTACCCTGACCTATTCCTCGTGCCTCTGGATTTGATCCCTGGCTTCATTTGAAGAAAAATGGTGTGTGTTTAACATTTGGTCTGGCAACATCAGTGGCCAATTCTCCTTGTGTTCCTGTCATCAGCTTGGTGTGCAATCTGACAATATGAATGACTGCAATGCCCTGATATCCAATGTTTcagtacccctccctccctcaatcatATAGGTTGTCAGTTCAGTCGTCTTTCTTCTGACTGAAGGAAACCTAATGATTGGCACTCCCCCGTCATCACACAGTGCTACAATGATGGGTTGTTTTCCATTCCTTCATGGCTTTTTGgacgtgtaaaaaaaaaagtcttATTTATTGCGAATTGTGTGTAGTTTTATATGAATTTAATGTCCGTTTTTTTCCTTCAATGTCTGGCATGTCAAagttattttttttt
>TU1730580
GCAACAATCCACCACACAACAGTATTAGTGAGGACACTTATCTTGAAAGGCGACATGGTTTAAACAATACAGCTCGTTATGTGCCAGACAATGGGTAGCTATGGTGCCAATTTCATGTTATTATTTTCTCTCCTACTTTTCCCCACAAGTGCTGCTGGAGATCTCTAGGCTATTGAACACAGGACTGGACATGGaatctctgtctatctgtgtcaGGCTGTGTGAGCAGGGCATCAACCCAGAGGCCCTGTCCTCTGTCATCAAGGAGCTACGTAAAGCCTCCGATTCACTAAAAGCCTCTGACAACTGAAGATCTGAGACTGATCCCAACAAAGCAATTCTGCTGAGCGGAAGTCTTTTCACGCAGTCAAGTTTCACAATATTGCCAAATAGTGAGCGTCTATTACCCTGACCTATTCCTCGTGCCTCTGGATTTGATCCCTGGCTTCATTTGAAGAAAAATGGTGTGTGTTTAACATTTGGTCTGGCAACATCAGTGGCCAATTCTCCTTGTGTTCCTGTCATCAGCTTGGTGTGCAATCTGACAATATGAATGACTGCAATGCCCTGATATCCAATGTTTcagtacccctccctccctcaatcatATAGGTTGTCAGTTCAGTCGTCTTTCTTCTGACTGAAGGAAACCTAATGATTGGCACTCCCCCGTCATCACACAGTGCTACAATGATGGGTTGTTTTCCATTCCTTCATGGCTTTTTGgacgtgtaaaaaaaaaagtcttATTTATTGCGAATTGTGTGTAGTTTTATATGAATTTAATGTCCGTTTTTTTCCTTCAATGTCTGGCATGTCAAagttattttttttt

Function

NR:

description
PREDICTED: mitotic-spindle organizing protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021560766.2 False 1035 mRNA 0.41 3 6201385 6203248
TU1730579 False 930 lncRNA 0.42 3 6201414 6203172
TU1730580 True 835 lncRNA 0.43 2 6201838 6203172

Neighbor

gene id symbol gene type direction distance location
LOC110518779 dis3 coding upstream 12459 6172823 ~ 6188926 (+)
LOC118941019 tgfbrap1 coding upstream 43409 6146666 ~ 6157976 (+)
LOC110527156 LOC106575911 coding upstream 104784 6082293 ~ 6096601 (+)
LOC110511044 adprhl1 coding upstream 119202 6070774 ~ 6082183 (+)
LOC118941024 dcun1d2 coding upstream 136196 5998183 ~ 6065189 (+)
ubac2 LOC106591293 coding downstream 115653 6318901 ~ 6351781 (+)
LOC110512784 LOC106574826 coding downstream 148668 6351916 ~ 6384414 (+)
LOC110495361 LOC106575795 coding downstream 196900 6398763 ~ 6403517 (+)
LOC110496964 LOC106594657 coding downstream 201185 6404433 ~ 6459931 (+)
LOC118941080 NA coding downstream 286983 6490231 ~ 6491752 (+)
G1512506 NA non-coding upstream 31459 6169301 ~ 6169926 (+)
G1512504 NA non-coding upstream 33367 6167778 ~ 6168018 (+)
G1512503 NA non-coding upstream 34550 6165522 ~ 6166835 (+)
G1512502 NA non-coding upstream 37010 6164105 ~ 6164375 (+)
G1512498 NA non-coding upstream 38502 6162286 ~ 6162883 (+)
G1512526 NA non-coding downstream 37204 6240452 ~ 6241742 (+)
G1512540 NA non-coding downstream 74334 6277582 ~ 6279381 (+)
G1512523 NA non-coding downstream 93063 6296311 ~ 6296678 (+)
G1512534 NA non-coding downstream 119630 6322878 ~ 6325377 (+)
G1512548 NA non-coding downstream 127226 6330474 ~ 6332939 (+)
LOC110513970 LOC106575958 other upstream 530052 5461902 ~ 5702970 (+)
G1512309 NA other upstream 588349 5607908 ~ 5613036 (+)
G1512205 NA other upstream 957958 5242734 ~ 5243427 (+)
G1512182 NA other upstream 1095297 5104087 ~ 5106088 (+)
LOC110514219 LOC106594890 other downstream 347397 6493403 ~ 6573608 (+)
LOC110516612 LOC106574917 other downstream 505411 6705632 ~ 6710286 (+)
G1513452 NA other downstream 822960 7026208 ~ 7026810 (+)

Expression


Co-expression Network