ubac2 (LOC106591293)


Basic Information

Item Value
gene id ubac2
gene name LOC106591293
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 6318901 ~ 6351781 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951484.1
ACAATCTCGAACAATTTTGGACGAACTCGACCACCGTACTCGATACCCTTTCCCCTCTATCTCACTatggtgtttttttttctttctaactTTTAGTTACTATAGCTAAGTTTGTACCTTCATTTTGCAGTGCCTTTACACAGACagtcattatatatatatttttcgtTTTCCATCATGTTCACGACCACCGGTTCCCGAGGGCTCGATAAGGCCCCCCTGTCTAAAGGTCTCCTCCTGGTCCTCAGTGGTCTGACTGTCGTGCTAAACCTCCTGCCACAGTACAATCACCTGTTCACCTACAGCCTGCAGGCCATCACGCTGCAGCACCAGGTATGGCGGTTAGTGTGTGGCAGACTGATCTGTCTGGACCTAAAGGACACCTTCTGCAACAGTCTGCTCATCTACAACTTCCGCATCTTGGAGAGACGGTTCGGCAGCAGAAAATTTGCTTCCTTCCTGTTTGGGACGTGGGTGCTCACTGCACTGGTGGACTTCCTGCTGTCCGAAGCGTTTCACTACCTGTTTGACTACCAGGTGTCTGAGCTGCCTGCCGGACTgcTAGGCCCATTGTTCAGCCTGTTTGTACCTTTCTACTCCTCCATCCCCAAGGTTCCAGTCACTCAACTCCTTGGTCAGATCTCCATAACTAACAAGTCCCTGGTTTACATTGTAGGCCTGCAGCTCCTGACCTCCAGTCCGTTCATGTGGCTCGTTGCTCTCAGTGGACTGGTCTCTGGGAAGCTGTACCACGGAAATGCTCTGGGGGTGCAGCGGCTGCTCTTCGTGCCCCGGTGGCTGTCCCGTGTAGGGGCCTTCGTCCTGGAGCCCCTGTTCTCTGGGCCCCCGCCCCCCAATGAACCCCCCCTGGGTATGGGGGCTACTCTGGACATCCAGAGACAGCAGAGGATGGATCTGCATGATCAACAGATGCTGCTGGCCCAGTTCCATCAGGCCAGGAGGAACCACAGACCACCACAGaATGGCCTAATGAACTGGAACAGATTTTTCCCATCGCTGAGACACAGAGGACAGAACCTTCCCCCAGAGCTGCAGCCACACCCCTCTCCACAGCAGCTCCACCCCACAGCTCCACCACTGCTGGAGCCCACAGCTCCTCCACTGCTGGAGCCCACAGCTCCTCCCTTGGTCAACACTCCTGTAGCTGAAGAACAGGTGAGCACTGTTGCCAGATTGATGGAGATGGGCTTCTCCAGAATAGATGCTCAGGATGCCCTCAGAGCATCCAACAACGACATCAACGTGGCAACCAACTTTCTACTGCAGCATTTAGGGTAGGGAGGAGTTTGAAAGATGTAGAACCtgagagagaaaaacaacagAATGAAGTGTGGGTCTGATCCAGTGAGCAGGGTCCTGGGGGTTTGAGGCCAGGGTGACCGGCCTGCTCTGGAGCTCCAGAGGACTACACAGAGAATAACTCAACACAGACTACACAATTActatgaggaaaggagaggaggaggacagtaaTGCTGCTGCTGTCCACCGTGCTTCCTGAAGGGTGAAGAGGGCTGTCCACAGTGCTTCCTGGTAGTGGGTGCTCAGCCCTGTTCCAGATAGTTTGGATACTCTGTCCTGTCACCTTGCTGCTGAGGGACAGAGGAGGATCAGAAGGCTGCTATTCTCAGGGCTTGTTGCATCTAGTGTCTTCTCTATACTCTAGCATTACCGTGGTTCATTACGGCTTcctccacctcacacacaccttcgcccagaaaacacacacattcgCCAGTCCCTAAAGGTTTTCTTTTGTGTCATTTGTCCATGGACCGTGATTACAGGAGTTTGTTTGCTTGACTTCTGCAGAATTAATGTACAATTCCTCAGAATTAATCTAAAATCTTAAAGGGGTTTGAAATGAGGAGAATATACTAAATTATGGAAACTGTCAATCTTGTATACTCAATGAAAAACGTCTGCACATGTACTACTTAGTGGATGGCTTGTATGTTTAGCTGCTCAGTGGCTACATTCTGGTTAACTACACTATGGAATAAAATCATGATGACAAGATATTAATTATTTAAACTGTTTCACTAGTTTTTCACAAAATCATTGAGGATTTAACACTTAtttatataattttttatttactttttgttTTATGTGACTGACTGTATAAACGGGGGTGTGCTTGTTGTTCGGTTAACCTATGCCTGTGTGTGGTGTCATTATGCTACAGATTACAAATGATTAACAATTTAACAAACTGCTTCCAACCACTGAAATATATATGCAATGTGCTCTGCTGTGGTAACCGTGCTGCCCATACATCGTTACAACAGTATAATGGCCTAATGAATAAACCTACCTCTCACCTTCAGATGATTTTCTGCTTTAATTCACAGCATTACTCGTGTTTATTATGCTTTGGGATGACTGTGACAAACATGGCGAATAATAGTTCCCGTTTTGAGAGAAATATTAGTTTTACACTGCCATCTCCAGGTCGTTGTTGGAATAGGCACTTTCTGCCAGAGACGAAATTGTAAGGTGCTCTGAATGTTGCTGTTTGATTCTCAGCGGAATTAGAAATCATGACAATAAACCCGTTTTTAattcta
>XM_036951485.1
AATCTCGAACAATTTTGGACGAACTCGACCACCGTACTCGATACCCTTTCCCCTCTATCTCACTatggtgtttttttttctttctaactTTTAGTTACTATAGCTAAGTTTGTACCTTCATTTTGCAGTGCCTTTACACAGACagtcattatatatatatttttcgtTTTCCATCATGTTCACGACCACCGGTTCCCGAGGGCTCGATAAGGCCCCCCTGTCTAAAGGTCTCCTCCTGGTCCTCAGTGGTCTGACTGTCGTGCTAAACCTCCTGCCACAGTACAATCACCTGTTCACCTACAGCCTGCAGGCCATCACGCTGCAGCACCAGGTATGGCGGTTAGTGTGTGGCAGACTGATCTGTCTGGACCTAAAGGACACCTTCTGCAACAGTCTGCTCATCTACAACTTCCGCATCTTGGAGAGACGGTTCGGCAGCAGAAAATTTGCTTCCTTCCTGTTTGGGACGTGGGTGCTCACTGCACTGGTGGACTTCCTGCTGTCCGAAGCGTTTCACTACCTGTTTGACTACCAGGTGTCTGAGCTGCCTGCCGGACTgcTAGGCCCATTGTTCAGCCTGTTTGTACCTTTCTACTCCTCCATCCCCAAGGTTCCAGTCACTCAACTCCTTGGTCAGATCTCCATAACTAACAAGTCCCTGGTTTACATTGTAGGCCTGCAGCTCCTGACCTCCAGTCCGTTCATGTGGCTCGTTGCTCTCAGTGGACTGGTCTCTGGGAAGCTGTACCACGGAAATGCTCTGGGGGTGCAGCGGCTGCTCTTCGTGCCCCGGTGGCTGTCCCGTGTAGGGGCCTTCGTCCTGGAGCCCCTGTTCTCTGGGCCCCCGCCCCCCAATGAACCCCCCCTGGGTATGGGGGCTACTCTGGACATCCAGAGACAGCAGAGGATGGATCTGCATGATCAACAGATGCTGCTGGCCCAGTTCCATCAGGCCAGGAGGAACCACAGACCACCACAGaATGGCCTAATGAACTGGAACAGATTTTTCCCATCGCTGAGACACAGAGGACAGAACCTTCCCCCAGAGCTGCAGCCACACCCCTCTCCACAGCAGCTCCACCCCACAGCTCCACCACTGCTGGAGCCCACAGCTCCTCCACTGCTGGAGCCCACAGCTCCTCCCTTGGTCAACACTCCTGTAGCTGAAGAACAGGTTGCCAGATTGATGGAGATGGGCTTCTCCAGAATAGATGCTCAGGATGCCCTCAGAGCATCCAACAACGACATCAACGTGGCAACCAACTTTCTACTGCAGCATTTAGGGTAGGGAGGAGTTTGAAAGATGTAGAACCtgagagagaaaaacaacagAATGAAGTGTGGGTCTGATCCAGTGAGCAGGGTCCTGGGGGTTTGAGGCCAGGGTGACCGGCCTGCTCTGGAGCTCCAGAGGACTACACAGAGAATAACTCAACACAGACTACACAATTActatgaggaaaggagaggaggaggacagtaaTGCTGCTGCTGTCCACCGTGCTTCCTGAAGGGTGAAGAGGGCTGTCCACAGTGCTTCCTGGTAGTGGGTGCTCAGCCCTGTTCCAGATAGTTTGGATACTCTGTCCTGTCACCTTGCTGCTGAGGGACAGAGGAGGATCAGAAGGCTGCTATTCTCAGGGCTTGTTGCATCTAGTGTCTTCTCTATACTCTAGCATTACCGTGGTTCATTACGGCTTcctccacctcacacacaccttcgcccagaaaacacacacattcgCCAGTCCCTAAAGGTTTTCTTTTGTGTCATTTGTCCATGGACCGTGATTACAGGAGTTTGTTTGCTTGACTTCTGCAGAATTAATGTACAATTCCTCAGAATTAATCTAAAATCTTAAAGGGGTTTGAAATGAGGAGAATATACTAAATTATGGAAACTGTCAATCTTGTATACTCAATGAAAAACGTCTGCACATGTACTACTTAGTGGATGGCTTGTATGTTTAGCTGCTCAGTGGCTACATTCTGGTTAACTACACTATGGAATAAAATCATGATGACAAGATATTAATTATTTAAACTGTTTCACTAGTTTTTCACAAAATCATTGAGGATTTAACACTTAtttatataattttttatttactttttgttTTATGTGACTGACTGTATAAACGGGGGTGTGCTTGTTGTTCGGTTAACCTATGCCTGTGTGTGGTGTCATTATGCTACAGATTACAAATGATTAACAATTTAACAAACTGCTTCCAACCACTGAAATATATATGCAATGTGCTCTGCTGTGGTAACCGTGCTGCCCATACATCGTTACAACAGTATAATGGCCTAATGAATAAACCTACCTCTCACCTTCAGATGATTTTCTGCTTTAATTCACAGCATTACTCGTGTTTATTATGCTTTGGGATGACTGTGACAAACATGGCGAATAATAGTTCCCGTTTTGAGAGAAATATTAGTTTTACACTGCCATCTCCAGGTCGTTGTTGGAATAGGCACTTTCTGCCAGAGACGAAATTGTAAGGTGCTCTGAATGTTGCTGTTTGATTCTCAGCGGAATTAGAAATCATGACAATAAACCCGTTTTTAattcta

Function

NR:

description
ubiquitin-associated domain-containing protein 2

GO: NA

KEGG:

id description
K25216 UBAC2; ubiquitin-associated domain-containing protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951484.1 False 2591 mRNA 0.47 9 6318901 6351781
XM_036951485.1 True 2580 mRNA 0.47 9 6318903 6351781

Neighbor

gene id symbol gene type direction distance location
mzt1 NA coding upstream 115653 6201385 ~ 6203248 (+)
LOC110518779 dis3 coding upstream 129975 6172823 ~ 6188926 (+)
LOC118941019 tgfbrap1 coding upstream 160925 6146666 ~ 6157976 (+)
LOC110527156 LOC106575911 coding upstream 222300 6082293 ~ 6096601 (+)
LOC110511044 adprhl1 coding upstream 236718 6070774 ~ 6082183 (+)
LOC110512784 LOC106574826 coding downstream 135 6351916 ~ 6384414 (+)
LOC110495361 LOC106575795 coding downstream 48367 6398763 ~ 6403517 (+)
LOC110496964 LOC106594657 coding downstream 52652 6404433 ~ 6459931 (+)
LOC118941080 NA coding downstream 138450 6490231 ~ 6491752 (+)
LOC110514219 LOC106594890 coding downstream 141622 6493403 ~ 6573608 (+)
G1512523 NA non-coding upstream 22223 6296311 ~ 6296678 (+)
G1512540 NA non-coding upstream 39520 6277582 ~ 6279381 (+)
G1512526 NA non-coding upstream 77159 6240452 ~ 6241742 (+)
G1512506 NA non-coding upstream 148975 6169301 ~ 6169926 (+)
G1513174 NA non-coding downstream 25949 6377730 ~ 6377948 (+)
G1513181 NA non-coding downstream 38259 6390040 ~ 6390317 (+)
G1513183 NA non-coding downstream 41918 6393699 ~ 6394103 (+)
G1513204 NA non-coding downstream 55631 6407412 ~ 6407860 (+)
LOC110513970 LOC106575958 other upstream 647568 5461902 ~ 5702970 (+)
G1512309 NA other upstream 705865 5607908 ~ 5613036 (+)
G1512205 NA other upstream 1075474 5242734 ~ 5243427 (+)
G1512182 NA other upstream 1212813 5104087 ~ 5106088 (+)
LOC110516612 LOC106574917 other downstream 356878 6705632 ~ 6710286 (+)
G1513452 NA other downstream 674427 7026208 ~ 7026810 (+)

Expression


Co-expression Network