LOC110523347 (LOC106595274)


Basic Information

Item Value
gene id LOC110523347
gene name LOC106595274
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 9115618 ~ 9128658 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951402.1
ATGGCCCCAGTGTGTAACTGTCTTCATGCAGGGCTCTCTCAATTAGTGAAAACACAGAAGGTTGTCACAGCAACCCTGGGAGAAGATGCAGTCTTAACCTGTGAGCTCATGACACCGAAAGACGTGCGGCAAGTCACCTGGCAGAAAGAGACACCAGGGCCGAAGGAAAATGTGGCCACTTACAGCAAACGAGGTCCTGATGTCAACGTACGTTTTAAGGGGAAAGTGGAGTTTGAAGACGAGGGACTGCAGAACTGCTCTATCGTCATCAGAGGAGTGTCAAGAGGAGACGAGTCCTGCTACAAGTGTCTGTTTAACACCTTTCCAGAGGGAGCTATCAGTGGAACGACCTGTCTCCATGTCAATGAGCTGTATGGACCCTCACTCCTCATCACACAAACCAACAACAGTCACAccactctgtcctgttctgctacTGGACGGCCTGTTCCTACAGTAACCTGGGAAGACACAGAAATTCTAGAAAATTCCACAATGGCCAATGTCACCCATCTCAATGGAACTGTCACGGTCACCATAACTTCTACGCTGGCAGCATTCAGTCTACCTGACAAAGACACCAGGGTTGGCTGTATGGTGTCACTGTTCTCTGGAGGTGTCACCAAGAACGTATTCATGGTTATTCCAGGTAGAACACAAGCTTCATTTCCTGGTGTACCTGAGGTCACTGATGGTGACAGGATCAGAGGGATTGGTGCAGTGATGGGTTCACTGTGTTTCATTGCTGTGTGCTGTGGAGCTGCTGTGGCACTGTGGTGCAAACTGAGAAATACAATGAGAAGCCAATGACGGAGAACAGGAAGAACCATCAACACTCAACCCTCAAAATGATGACCCTGAAACAAGTAAACAGTGTTTGTACTTACTGTAGGTAATAGATTAGAAAACATTGAATTGCTTTTCAGTATCAAATGTCCTCCCTGGAGAATATGTAACTGTAAATACCCACAAAGCCGTTATATCAGTACACTGTTACAACAGATGATCTGACTCTGATCAGTATCATTGATGTTAATGTATTTCAGGACCACAACAATCTCCAGTACATTCTAAATGTGTTAGTACAACCTTATTGGATCATCCTGGTAGAGTGGTAGTCATGGTGACCGCATACATGCAAATGAGTTGCATTGTTGCATTGTTGTTCCAGTATGttatttgtattttgtatataTTAGGGATCCCCCATtagctgctactcttcctgggtccaAACATATTACAGTACTTACAttaatgaagtcaatctctcctctactttgatccatgagagattgacatgcatgtcattaatgttagctctccgtgtacttttaagggccagccgtgctgccctgttctgagcca

Function

NR:

description
PREDICTED: OX-2 membrane glycoprotein-like isoform X1

GO: NA

KEGG:

id description
K06556 CD200; CD200 antigen

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951402.1 True 1368 mRNA 0.45 6 9115618 9128658

Neighbor

gene id symbol gene type direction distance location
LOC118941059 LOC106595274 coding upstream 4135 9108236 ~ 9111483 (+)
LOC118941086 LOC106575849 coding upstream 15132 9094895 ~ 9100486 (+)
LOC110527296 LOC106575803 coding upstream 84956 9023116 ~ 9030662 (+)
LOC110496974 LOC106574764 coding upstream 146832 8950376 ~ 8968786 (+)
LOC110496912 NA coding upstream 165426 8948861 ~ 8950192 (+)
LOC100653484 LOC106573841 coding downstream 5904 9134562 ~ 9160007 (+)
LOC110497024 dnpep coding downstream 118169 9246827 ~ 9255405 (+)
LOC110495547 ptprn coding downstream 127916 9256574 ~ 9299643 (+)
LOC110495570 LOC106573853 coding downstream 372850 9501508 ~ 9550995 (+)
LOC110527259 LOC106575807 coding downstream 613446 9742104 ~ 9765236 (+)
G1515044 NA non-coding upstream 34250 9080780 ~ 9081368 (+)
G1515006 NA non-coding upstream 111504 9003208 ~ 9004114 (+)
G1514998 NA non-coding upstream 124834 8989653 ~ 8990784 (+)
G1514996 NA non-coding upstream 127964 8985179 ~ 8987654 (+)
G1514971 mbd5 non-coding upstream 197367 8918010 ~ 8918251 (+)
G1515076 LOC106575847 non-coding downstream 10330 9138988 ~ 9140844 (+)
G1515093 NA non-coding downstream 40318 9168976 ~ 9196410 (+)
G1515098 NA non-coding downstream 48992 9177650 ~ 9178516 (+)
G1515109 LOC106575840 non-coding downstream 83918 9212576 ~ 9229128 (+)
G1515110 LOC106575840 non-coding downstream 89603 9218261 ~ 9223736 (+)
G1515005 cbs other upstream 112492 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 435408 8677497 ~ 8682383 (+)
LOC110495394 LOC106574832 other upstream 439107 8623967 ~ 8676626 (+)
G1514274 NA other upstream 538793 8576493 ~ 8576825 (+)
LOC110528849 LOC105022557 other upstream 611282 8498352 ~ 8506254 (+)
G1515776 NA other downstream 845870 9974528 ~ 9975306 (+)
G1515853 NA other downstream 1041444 10170102 ~ 10171956 (+)
G1516136 NA other downstream 1190652 10310107 ~ 10327138 (+)
G1516637 NA other downstream 1888107 11016765 ~ 11017089 (+)
LOC118941092 LOC106575823 other downstream 1957427 10978682 ~ 11092554 (+)

Expression


Co-expression Network