LOC110497024 (dnpep)


Basic Information

Item Value
gene id LOC110497024
gene name dnpep
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 9246827 ~ 9255405 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951705.1
CCTCAAATTACCCATTGTTAGTTTCTACATCGCTGGTCTTTATCAAATCTGTCAGATTTCTCGGGTGCTTTACACCGGGTACGCAGTTTAAAAGTCCAGTTAAACATTAATGCAGTCACTGATCATGAAAAGTTCAAAGGAAGCTGTGCAGACTGCTGCCAAGGAATTCCTGCAGTTCGTGAACAAAGGAGTGTCTCCATACCACGTGGTTGAGGAGTGTAAGTCTCGTCTGCTGGGGGCTGGCTTTACTGAGCTGAAGGAGACTGAGCAGTGGAACATCAAGCCTGCCAGTAAGTACTTTGTGACCCGTAACTACTCCTCCATCATCGCTTTTGCTGTGGGTGGACATTTCCAGCCAGGCAATGGCTTCACTATGATTGGAGCGCACACAGACAGCCCCTGTCTGAGGATTAAGCCACGGTCCAAGAAGACCAAACAGGGCTGTCTGCAGGTCGGGGTGGAGTGCTACGGAGGAGGAATCTGGAACACCTGGTTTGACCGGGATCTGACCATCGCCGGTCGTGTTATGGTCAAGACTGGAGACAAGCTGGTCCATCGTCTGGTTCACGTGCCCCGGCCGATCATGAGGATCCCCCACCTGGCCATCCACCTCCAGAGGGACATCAACGACTCCTTCGGCCCCAACAAGGAGAACCACCTtgtgccCATCCTAGCCACTGCTGTACAGGAGGAGTTGGAGACTGGCTGCTGTTCCACTGGGGATGCCTGCGATGCCACCACTTTTGCAGAGAAGCACCACCCGGCCCTGGTCAAGGTGCTGTGTTCAGAGCTGGACGTTCAGCCTGAGGCCCTGCTGGACTTTGAGCTGTGTCTGGCTGACACTCAGCCAGGGGCAATTGGTGGTGTGTTTGAAGAGTTCATCTACTCCCCCCGTCTGGACAACCTCCACAGCTGCTACTGTGCCCTGCAGGCTCTGATGGACTCCTGCATCTCTGGAGACTCTTTGGCCACAGACCCCAACATCAGGATGGTGACTCTGTTTGACAATGAAGAGGTGGGGTCAGAGAGCGCCCAGGGGGCagcgtccaacctgacagagctgatcCTGAGTCGACTGTCCTCCTCCCCCACCAACCTCACAGCCTTCCAGCAGGCGGTGCCACGCTCCTTCATGATCAGCGCCGACATGGCCCACGCCCTGCACCCCAACTACCAGGAGAAGCATGATGAAAACCACAGACCAGCCTTCCACAAGggtcctGTAGTTAAATTCAACAGTAACCAGCGCTATGCCACTACGGCTGTGACAGCCTCCATCTTGAGAGAGATCGCCAGTCGTGTTGGTGTGCCTCTTCAGGATGTGATGGTGCGTAACGACAGCCCCTGTGGGACCACCATCGGCCCCATCCTGTCTTCCCGCCTGGGGATCCCCGTGCTGGACATCGGTGCCCCCCAGCTGGCCATGCACTCCATCAGGGAGATGTGCTGCACCTCCGGGGTGCTCCAGTCTACCAACCTATTCAAGGGCTTCTTTGAGCTCTTCCCCACTGTGAGAGACATGGTGACTGTGGACTAGCCTGGGGGAAGGACACAGCAtggacagaaggacagacagatgTCCTCCTCTGGGTCTCTCTACACACGGTGTTATTTGTATACTCACATGACACACAGTGCTACAGCAGAACGTTTTGCACACATTCAGAGGCAAGGAAAGTTTCCTTCAAATTATGTTTCTGATGAACTGAAATGGtttataaaataatacatttttaatctaca
>XM_036951706.1
TTAAACATTAATGCAGGTAAGCGCCATAAATTATGATTTTGCAGTCGGTTTATTAAGCGGTGTAGCTAGCTCAGAGCGGTCTGATTCAACTTTTAGAAGCTGCGTTTGCTGTGTCTAAGTCACTGATCATGAAAAGTTCAAAGGAAGCTGTGCAGACTGCTGCCAAGGAATTCCTGCAGTTCGTGAACAAAGGAGTGTCTCCATACCACGTGGTTGAGGAGTGTAAGTCTCGTCTGCTGGGGGCTGGCTTTACTGAGCTGAAGGAGACTGAGCAGTGGAACATCAAGCCTGCCAGTAAGTACTTTGTGACCCGTAACTACTCCTCCATCATCGCTTTTGCTGTGGGTGGACATTTCCAGCCAGGCAATGGCTTCACTATGATTGGAGCGCACACAGACAGCCCCTGTCTGAGGATTAAGCCACGGTCCAAGAAGACCAAACAGGGCTGTCTGCAGGTCGGGGTGGAGTGCTACGGAGGAGGAATCTGGAACACCTGGTTTGACCGGGATCTGACCATCGCCGGTCGTGTTATGGTCAAGACTGGAGACAAGCTGGTCCATCGTCTGGTTCACGTGCCCCGGCCGATCATGAGGATCCCCCACCTGGCCATCCACCTCCAGAGGGACATCAACGACTCCTTCGGCCCCAACAAGGAGAACCACCTtgtgccCATCCTAGCCACTGCTGTACAGGAGGAGTTGGAGACTGGCTGCTGTTCCACTGGGGATGCCTGCGATGCCACCACTTTTGCAGAGAAGCACCACCCGGCCCTGGTCAAGGTGCTGTGTTCAGAGCTGGACGTTCAGCCTGAGGCCCTGCTGGACTTTGAGCTGTGTCTGGCTGACACTCAGCCAGGGGCAATTGGTGGTGTGTTTGAAGAGTTCATCTACTCCCCCCGTCTGGACAACCTCCACAGCTGCTACTGTGCCCTGCAGGCTCTGATGGACTCCTGCATCTCTGGAGACTCTTTGGCCACAGACCCCAACATCAGGATGGTGACTCTGTTTGACAATGAAGAGGTGGGGTCAGAGAGCGCCCAGGGGGCagcgtccaacctgacagagctgatcCTGAGTCGACTGTCCTCCTCCCCCACCAACCTCACAGCCTTCCAGCAGGCGGTGCCACGCTCCTTCATGATCAGCGCCGACATGGCCCACGCCCTGCACCCCAACTACCAGGAGAAGCATGATGAAAACCACAGACCAGCCTTCCACAAGggtcctGTAGTTAAATTCAACAGTAACCAGCGCTATGCCACTACGGCTGTGACAGCCTCCATCTTGAGAGAGATCGCCAGTCGTGTTGGTGTGCCTCTTCAGGATGTGATGGTGCGTAACGACAGCCCCTGTGGGACCACCATCGGCCCCATCCTGTCTTCCCGCCTGGGGATCCCCGTGCTGGACATCGGTGCCCCCCAGCTGGCCATGCACTCCATCAGGGAGATGTGCTGCACCTCCGGGGTGCTCCAGTCTACCAACCTATTCAAGGGCTTCTTTGAGCTCTTCCCCACTGTGAGAGACATGGTGACTGTGGACTAGCCTGGGGGAAGGACACAGCAtggacagaaggacagacagatgTCCTCCTCTGGGTCTCTCTACACACGGTGTTATTTGTATACTCACATGACACACAGTGCTACAGCAGAACGTTTTGCACACATTCAGAGGCAAGGAAAGTTTCCTTCAAATTATGTTTCTGATGAACTGAAATGGtttataaaataatacatttttaatctaca
>TU1734269
cactccatcagggAGATGTGCTGCACCTCTGGAGTACTCCAGTCTACCAACCTATTCAAGGGCTTCTTTGAGCTCTTCCCCACTGTGAGAGACATGGTGACTGTGGACTAGCCTGGGGGAAGGACACAGCAtggacagaaggacagacagatgTCCTCCTCTGGGTCTCTCTACACACGGTGTTATTTGTATACTCACATGACACACAGTGCTACAGCAGAACGTTTTGCACACATTCAGAGGCAAGGAAAGTTTCCTTCAAATTATGTTTCTGATGAACTGAAATGGtttataaaataatacatttttaatctaca

Function

symbol description
dnpep Predicted to enable aminopeptidase activity; metallopeptidase activity; and zinc ion binding activity. Predicted to act upstream of or within proteolysis. Is expressed in female organism. Orthologous to human DNPEP (aspartyl aminopeptidase).

NR:

description
aspartyl aminopeptidase-like

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004177 aminopeptidase activity molecular_function
GO:0008237 metallopeptidase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951705.1 False 1743 mRNA 0.54 15 9246827 9255405
XM_036951706.1 False 1747 mRNA 0.54 15 9246926 9255405
TU1734269 True 317 lncRNA 0.45 2 9254528 9255405

Neighbor

gene id symbol gene type direction distance location
LOC100653484 LOC106573841 coding upstream 86820 9134562 ~ 9160007 (+)
LOC110523347 LOC106595274 coding upstream 118169 9115618 ~ 9128658 (+)
LOC118941059 LOC106595274 coding upstream 135344 9108236 ~ 9111483 (+)
LOC118941086 LOC106575849 coding upstream 146341 9094895 ~ 9100486 (+)
LOC110527296 LOC106575803 coding upstream 216165 9023116 ~ 9030662 (+)
LOC110495547 ptprn coding downstream 1169 9256574 ~ 9299643 (+)
LOC110495570 LOC106573853 coding downstream 246103 9501508 ~ 9550995 (+)
LOC110527259 LOC106575807 coding downstream 486699 9742104 ~ 9765236 (+)
LOC110527263 LOC106598167 coding downstream 588160 9843565 ~ 9845412 (+)
LOC110527266 LOC106595105 coding downstream 596048 9851453 ~ 9854072 (+)
G1515109 LOC106575840 non-coding upstream 17699 9212576 ~ 9229128 (+)
G1515110 LOC106575840 non-coding upstream 23091 9218261 ~ 9223736 (+)
G1515093 NA non-coding upstream 50417 9168976 ~ 9196410 (+)
G1515098 NA non-coding upstream 68311 9177650 ~ 9178516 (+)
G1515076 LOC106575847 non-coding upstream 105983 9138988 ~ 9140844 (+)
G1515266 LOC106598125 non-coding downstream 46321 9301726 ~ 9311147 (+)
G1515270 NA non-coding downstream 58058 9313463 ~ 9315447 (+)
G1515296 NA non-coding downstream 63880 9319285 ~ 9319732 (+)
G1515274 NA non-coding downstream 114035 9369440 ~ 9369739 (+)
G1515432 NA non-coding downstream 231462 9486867 ~ 9488511 (+)
G1515005 cbs other upstream 243701 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 566617 8677497 ~ 8682383 (+)
LOC110495394 LOC106574832 other upstream 570316 8623967 ~ 8676626 (+)
G1514274 NA other upstream 670002 8576493 ~ 8576825 (+)
LOC110528849 LOC105022557 other upstream 742491 8498352 ~ 8506254 (+)
G1515776 NA other downstream 719123 9974528 ~ 9975306 (+)
G1515853 NA other downstream 914697 10170102 ~ 10171956 (+)
G1516136 NA other downstream 1063905 10310107 ~ 10327138 (+)
G1516637 NA other downstream 1761360 11016765 ~ 11017089 (+)
LOC118941092 LOC106575823 other downstream 1830680 10978682 ~ 11092554 (+)

Expression


Co-expression Network