LOC110527275 (LOC106590732)


Basic Information

Item Value
gene id LOC110527275
gene name LOC106590732
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 10374771 ~ 10387073 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951776.1
AGTTAACCAACGATTTACCACTGATTTATGGATGGCTCCACGACTTGGGTGTCGCTCCTGTCCCCAGTTAAAATAGCCAACTGGCGTGAACAATGGCTTCGGTTGGAGCATGCATATTCATTTGATGAATCAGTTATTGCAAAGGACAATGAGACGGAAGAATTAGCGCATCAATACACAGAAGAAGAGAACACGAGTGAGAAGTTAGGTTACTGCCGCGTCTCTTCGGTGCAGTCCATAATAAGAAGCTATGGCACTAGACTGTACATCGCTGACAAAACTAACCCTTGTTTTATGTGTGGCGGCAGCCCGTGGCTTTCCCCCAGTGAGCGGCTGCAGCGATGCCTACGGGAGGGCCATTCCACCACTTAGCAGCTGCAGCGGTGCCTACGGGAGGGCCATCTCTGACTTCTGTGTGACCAAGTTCACTCTGGACATGAAGGCCCTGGACCAGAGCCTGTGGTGCAGCTGGTCCGACACTTTTCAGCCTTACGAGGAACTGACCAACTGCACCTATTTTGTGGCACTCAAGATGCACTGCTTCTGGCCCAACCAGCAGATAGACGAACTCTTCATACGCCTTCACCGGGACTACTTTCACGACTGCGCTCTGACCGGCAGGCTGCTTCGGGACCCTCCTATACGTATCTTGGGGCCTTTCATTGGAGTGCCTGTGCTGGTCACTCTGCTCATGACTGCCCTAGTGGTGTGGAGCGGTAAATGCTGCCAGGGAATCGTGTAACTGTCTCATCCTGGGTGAAGGTGCCCCTGGGTACGgaatacagatctaggatcagtttgccCTGCCAAAATTCTAAACTGAATCATTAGCGGTGGAAACGCAAAACTGACTTCTAGGGATCAACCTGACCTCTTGGAGAACGAACTCCAGCTTATCTGATAGGGGAGACATGATGGAGGGGACACTGAACTGGGGCAAACGACAAGCAGAGATACCCAACAGCATACTAAGACTGTAATCTTTCTGTGATGTTTGTTGTTTGATGGACACTGGTGGTATGAGTGAAGGACCACTCAGAAGCCTACTACTGAAACAAAGCAAAGGCTATTTAAGATTGTGCTGTGGCTCATCAATAACCCTAGAAATTCCAATTGAAAACATGCATTGTATTGTTGTAAACCACAAAGTGGCCAACCAAGAGAGGGCTAATGTTGTGTAGGGCACGGAGGACAGATAGTAAATACCTCGTATGTCAAAATCAATGCAACAACATCTGTAATGTAGCTTTGGGCACCAGCCAAGTCTTTATATGAACTGAATAGATGTATATAAAGGGCTTCACAGAAAAGGCTGTATTTGATCTAGACAGCCACGCCCAGTAGCCACGCCCAGTAGCCACGCCCAGTTGCCATGACCAGTAGCCACGCCCAGTAGCCATGCCCAGTAGCCACGCCCAGTAGCCACGCCCAGTTGCCACGCCCAGTAGCCATGCCCAGTAGCCACGCCCAGTAGCCATGCCCAGTAGCCACGCCCAGTAGCCACGCCCAGTAGCCACGCCCAGTAGCCACACCCAGTAGCCATTCCCAGTAGCCACGCCTTTTAAACACAACAAAACaggaattatcttcatcagaatatgttgttttatattctaCCGTTTCACAATGGATTACAGAGCCATTACCACTGCATGTCTGATTATTCATTCATTATTATCTATTCATGTGCATTCTAAACAGAGAAATAAACAACTACAAATACTAATATGATAAAAGTGAACTAagaaattgtttttggtatccaTTTATTTTGATATCAATATGATATTTGTTTGATATCCAAACATGAATGAGAACAGAATTGAACTCCGACCTGAGGAGTGTAGAGATGCCCCTTCAGCCCACAGCCAGAACCAATATCTCTCTTCCCAGCACTGAGTGTCATACTACCatccacctactaccatatctaTCAGATTCAGGAGTCAGAGTACTCCAAcatcccaatacacacacacctgtgtagagaggtatcaaaaatacattacaATATGAACCATTCAAAAACAACCGGCTATTGTCATACTGTGGTGGGCAGAAGAAgaaggcaaacacacacacacacacgcacgcacgacacacacacacgcacacgcgcacacacacgcacgcacacgcacg
>XM_036951777.1
AAGTTAACCAACGATTTACCACTGATTTATGGATGGCTCCACGACTTGGGTGTCGCTCCTGTCCCCAGTTAAAATAGCCAACTGGCGTGAACAATGGCTTCGGTTGGAGCATGCATATTCATTTGATGAATCAGTTATTGCAAAGGACAATGAGACGGAAGAATTAGCGCATCAATACACAGAAGAAGAGAACACGAGTGAGAAGTTAGGTTACTGCCGCGTCTCTTCGGTGCAGTCCATAATAAGAAGCTATGGCACTAGACTGTACATCGCTGACAAAACTAACCCTTGTTTTATGTGTGGCGGCCCGTGGCTTTCCCCCAGTGAGCGGCTGCAGCGATGCCTACGGGAGGGCCATTCCACCACTTAGCAGCTGCAGCGGTGCCTACGGGAGGGCCATCTCTGACTTCTGTGTGACCAAGTTCACTCTGGACATGAAGGCCCTGGACCAGAGCCTGTGGTGCAGCTGGTCCGACACTTTTCAGCCTTACGAGGAACTGACCAACTGCACCTATTTTGTGGCACTCAAGATGCACTGCTTCTGGCCCAACCAGCAGATAGACGAACTCTTCATACGCCTTCACCGGGACTACTTTCACGACTGCGCTCTGACCGGCAGGCTGCTTCGGGACCCTCCTATACGTATCTTGGGGCCTTTCATTGGAGTGCCTGTGCTGGTCACTCTGCTCATGACTGCCCTAGTGGTGTGGAGCGGTAAATGCTGCCAGGGAATCGTGTAACTGTCTCATCCTGGGTGAAGGTGCCCCTGGGTACGgaatacagatctaggatcagtttgccCTGCCAAAATTCTAAACTGAATCATTAGCGGTGGAAACGCAAAACTGACTTCTAGGGATCAACCTGACCTCTTGGAGAACGAACTCCAGCTTATCTGATAGGGGAGACATGATGGAGGGGACACTGAACTGGGGCAAACGACAAGCAGAGATACCCAACAGCATACTAAGACTGTAATCTTTCTGTGATGTTTGTTGTTTGATGGACACTGGTGGTATGAGTGAAGGACCACTCAGAAGCCTACTACTGAAACAAAGCAAAGGCTATTTAAGATTGTGCTGTGGCTCATCAATAACCCTAGAAATTCCAATTGAAAACATGCATTGTATTGTTGTAAACCACAAAGTGGCCAACCAAGAGAGGGCTAATGTTGTGTAGGGCACGGAGGACAGATAGTAAATACCTCGTATGTCAAAATCAATGCAACAACATCTGTAATGTAGCTTTGGGCACCAGCCAAGTCTTTATATGAACTGAATAGATGTATATAAAGGGCTTCACAGAAAAGGCTGTATTTGATCTAGACAGCCACGCCCAGTAGCCACGCCCAGTAGCCACGCCCAGTTGCCATGACCAGTAGCCACGCCCAGTAGCCATGCCCAGTAGCCACGCCCAGTAGCCACGCCCAGTTGCCACGCCCAGTAGCCATGCCCAGTAGCCACGCCCAGTAGCCATGCCCAGTAGCCACGCCCAGTAGCCACGCCCAGTAGCCACGCCCAGTAGCCACACCCAGTAGCCATTCCCAGTAGCCACGCCTTTTAAACACAACAAAACaggaattatcttcatcagaatatgttgttttatattctaCCGTTTCACAATGGATTACAGAGCCATTACCACTGCATGTCTGATTATTCATTCATTATTATCTATTCATGTGCATTCTAAACAGAGAAATAAACAACTACAAATACTAATATGATAAAAGTGAACTAagaaattgtttttggtatccaTTTATTTTGATATCAATATGATATTTGTTTGATATCCAAACATGAATGAGAACAGAATTGAACTCCGACCTGAGGAGTGTAGAGATGCCCCTTCAGCCCACAGCCAGAACCAATATCTCTCTTCCCAGCACTGAGTGTCATACTACCatccacctactaccatatctaTCAGATTCAGGAGTCAGAGTACTCCAAcatcccaatacacacacacctgtgtagagaggtatcaaaaatacattacaATATGAACCATTCAAAAACAACCGGCTATTGTCATACTGTGGTGGGCAGAAGAAgaaggcaaacacacacacacacacgcacgcacgacacacacacacgcacacgcgcacacacacgcacgcacacgcacg

Function

NR:

description
receptor activity-modifying protein 1-like

GO:

id name namespace
GO:0006886 intracellular protein transport biological_process
GO:0008277 regulation of G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0008565 obsolete protein transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951776.1 False 2142 mRNA 0.48 3 10374771 10387072
XM_036951777.1 True 2140 mRNA 0.48 3 10374771 10387073

Neighbor

gene id symbol gene type direction distance location
LOC110516308 LOC105023143 coding downstream 144890 10174859 ~ 10229881 (-)
LOC110495586 LOC106574945 coding downstream 216265 10149011 ~ 10158506 (-)
LOC110497041 LOC106574885 coding downstream 227926 10138344 ~ 10146845 (-)
LOC110497040 LOC106593457 coding downstream 256999 10074275 ~ 10117772 (-)
LOC110514354 LOC106575825 coding downstream 317352 10000040 ~ 10057419 (-)
LOC118941093 NA coding upstream 801719 11185131 ~ 11194773 (-)
LOC110495606 LOC106575688 coding upstream 809024 11196097 ~ 11204430 (-)
LOC110527288 LOC106574778 coding upstream 824246 11211319 ~ 11212299 (-)
LOC110495607 LOC106592309 coding upstream 831946 11219019 ~ 11272018 (-)
LOC110495612 LOC106574782 coding upstream 887822 11274895 ~ 11299017 (-)
G1516232 NA non-coding downstream 1579 10367553 ~ 10373192 (-)
G1516147 NA non-coding downstream 36107 10338299 ~ 10338664 (-)
G1516146 NA non-coding downstream 37743 10336798 ~ 10337028 (-)
G1516121 NA non-coding downstream 91406 10283020 ~ 10283365 (-)
G1516120 NA non-coding downstream 93326 10280916 ~ 10281445 (-)
G1516249 NA non-coding upstream 38194 10425267 ~ 10425742 (-)
G1516253 NA non-coding upstream 45300 10432373 ~ 10432614 (-)
G1516255 NA non-coding upstream 52739 10439812 ~ 10440026 (-)
G1516256 NA non-coding upstream 53160 10440233 ~ 10440566 (-)
G1516257 NA non-coding upstream 56199 10443272 ~ 10443500 (-)
G1516107 NA other downstream 114779 10258825 ~ 10260556 (-)
G1516062 LOC107575789 other downstream 163938 10210318 ~ 10210833 (-)
G1515880 LOC102777708 other downstream 609546 9761473 ~ 9765225 (-)
LOC110495556 LOC106574923 other downstream 880889 9486842 ~ 9501240 (-)
G1516562 LOC106575810 other upstream 466496 10853569 ~ 10856314 (-)
G1516757 NA other upstream 661332 11048405 ~ 11048928 (-)
G1516771 LOC106575823 other upstream 702156 11089229 ~ 11092444 (-)
G1516784 unc80 other upstream 780548 11167621 ~ 11174483 (-)
LOC110528752 agap1 other upstream 1221963 11463472 ~ 11746107 (-)

Expression


Co-expression Network