LOC110495626


Basic Information

Item Value
gene id LOC110495626
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 11814290 ~ 11817266 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951846.1
TGGAATGTCCCCTTCCTGCTGAAGAGAATGCGGAAGCAAGAATAGGACCAAATGGGAAAGGGCATTTTCATCTGTTTCTAGTCACAGACCCGGGTGAAATCCAACAAATCTACAACATTTTAACTGTGGTCCTGCTACATTCCGCTCGCTGTTTACAAGCTATCATCAATAGTAGATATCAATAGGTGGTGGAAATGGAGCGCAGAGACGCATCGTCCACTAACGCAGACTGGATGTCTCAACTGCCAGAGGAACTGTGGGGTACACCGCTTTGGGACCTGGCGATACCCGGGAGTCATGACAGCATGAGTTACTGCCTGGATACACACTCTCCTGTCTTGGGGTCTGAGTCGTTTATGCTGCAGTTTCTGGATCGACTGGCACCCTGCATTGTACGCCCCTGTGTCTACCGCTGGGCCACCACACAGGCGTGGTGTATTCCTGATCAGTTGGATGCTGGAATCCGGTTCTTCGATCTACGGATCGCTcataaaaacataaaaaatacatTCAACACACAAGACATGTtaaaaacacacaacacagatgACACGCTGTATTTTGCACACGCGATTTATACGCTACAGACTGTAAAGgaggccCTGTCAACCATGGCTGTGTGGTTGGAGCAGCACCAGAAGGAGGTAGTGATCCTGTCCTGTTCCCACTTCTACCTGCTGACGGACTCTGAGCACCAGGCCCTGGTCTGCTACATCACTCAGCTGTTTAAAGACAAACTCTGCCCCCCACAGgagACTCCCTATCTGAGCCAGTGCTGGGATCTGGGGCAGCAGGTCATAATTTCGTACGACGATGAGACGATTCTTCACCAACACAAGCAACTGTGGCCTAAGATCCCTTACTGGTACGCTGACTCGGCAGACCCCAAAGAGGTCATTTCTTACCTGGAGGAGCGGCAGAAGGCCCAAGGAAGAGcagCTCATTTCTTCACCTCTGGGCTGAACCTGACGGAGGACACTGCTGTGGTGGTCTGCAACCCCTGTCTGACGATGAGGAAGTTAACGATGAAGAGTTTCTCCCTGCTGCTGGACTGGGTGGAGAAGCAGACTCCTGGACCGAACCAGACCGCTGTCAACATCATCTGTGGAGACTTTGTGGGTCTGAACCACTTTGCCTCTGTGGTTATCGGGCTCAATAAGAAACTGCTGAAGACAGAGAGCCACAGATGACTCACAAGGGACggaatgagaaagagacagataaaCATGCACAGAATCCCAAATGGCTTCTAGCTCCTTCTCCCTATGCagttgtggagatctgagaggttTGGTTAGGTGTAATCAACATGGTACTCTGACACACCTGATCTagtgtgtcaaactcattccatggagggcctactGTCTGTAGGttttttggtttttcctttcatttagacctagacaaccaggtgaggggagttccttgctAATTTGGGAGGAgcaaaaacccacagacactcggccctccgtggaatgagtttgacacgtgcacTACTAGATCAtaggaatgagtttgacacgtgcacTACTAGATCAtaggaatgagtttgacacgtgcacTACTAGATCATAGGAATGAGTTCCCATGTTTCCCTATGTCTACCTACAGCACAGGGTGGCAGGTTTACTGTGTTGATAATGAGTATGATGGATACAATGAAAGGTTTTTGCATTCTAAAGTAATGCCACAGGAAAAGTTTCATCAGATGGAcaatataatttattttttatatgcAAATACACTACATGCAGGGGCAAATACATAAATGTCTATTGAACTTTA
>XM_036951847.1
TGGAATGTCCCCTTCCTGCTGAAGAGAATGCGGAAGCAAGAATAGGACCAAATGGGAAAGGGCATTTTCATCTGTTTCTAGTCACAGACCCGGGTGAAATCCAACAAATCTACAACATTTTAACTGTGGTCCTGCTACATTCCGCTCGCTGTTTACAAGCTATCATCAATAGTAGATATCAATAGGTGGTGGAAATGGAGCGCAGAGACGCATCGTCCACTAACGCAGACTGGATGTCTCAACTGCCAGAGGAACTGTGGGGTACACCGCTTTGGGACCTGGCGATACCCGGGAGTCATGACAGCATGAGTTACTGCCTGGATACACACTCTCCTGTCTTGGGGTCTGAGTCGTTTATGCTGCAGTTTCTGGATCGACTGGCACCCTGCATTGTACGCCCCTGTGTCTACCGCTGGGCCACCACACAGgaggccCTGTCAACCATGGCTGTGTGGTTGGAGCAGCACCAGAAGGAGGTAGTGATCCTGTCCTGTTCCCACTTCTACCTGCTGACGGACTCTGAGCACCAGGCCCTGGTCTGCTACATCACTCAGCTGTTTAAAGACAAACTCTGCCCCCCACAGgagACTCCCTATCTGAGCCAGTGCTGGGATCTGGGGCAGCAGGTCATAATTTCGTACGACGATGAGACGATTCTTCACCAACACAAGCAACTGTGGCCTAAGATCCCTTACTGGTACGCTGACTCGGCAGACCCCAAAGAGGTCATTTCTTACCTGGAGGAGCGGCAGAAGGCCCAAGGAAGAGcagCTCATTTCTTCACCTCTGGGCTGAACCTGACGGAGGACACTGCTGTGGTGGTCTGCAACCCCTGTCTGACGATGAGGAAGTTAACGATGAAGAGTTTCTCCCTGCTGCTGGACTGGGTGGAGAAGCAGACTCCTGGACCGAACCAGACCGCTGTCAACATCATCTGTGGAGACTTTGTGGGTCTGAACCACTTTGCCTCTGTGGTTATCGGGCTCAATAAGAAACTGCTGAAGACAGAGAGCCACAGATGACTCACAAGGGACggaatgagaaagagacagataaaCATGCACAGAATCCCAAATGGCTTCTAGCTCCTTCTCCCTATGCagttgtggagatctgagaggttTGGTTAGGTGTAATCAACATGGTACTCTGACACACCTGATCTagtgtgtcaaactcattccatggagggcctactGTCTGTAGGttttttggtttttcctttcatttagacctagacaaccaggtgaggggagttccttgctAATTTGGGAGGAgcaaaaacccacagacactcggccctccgtggaatgagtttgacacgtgcacTACTAGATCAtaggaatgagtttgacacgtgcacTACTAGATCAtaggaatgagtttgacacgtgcacTACTAGATCATAGGAATGAGTTCCCATGTTTCCCTATGTCTACCTACAGCACAGGGTGGCAGGTTTACTGTGTTGATAATGAGTATGATGGATACAATGAAAGGTTTTTGCATTCTAAAGTAATGCCACAGGAAAAGTTTCATCAGATGGAcaatataatttattttttatatgcAAATACACTACATGCAGGGGCAAATACATAAATGTCTATTGAACTTTA

Function

NR:

description
LOW QUALITY PROTEIN: PI-PLC X domain-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951846.1 False 1788 mRNA 0.48 7 11814290 11817266
XM_036951847.1 True 1620 mRNA 0.49 6 11814290 11817266

Neighbor

gene id symbol gene type direction distance location
LOC110497052 LOC106574838 coding downstream 23060 11780939 ~ 11791230 (-)
LOC110495629 LOC106574809 coding downstream 65682 11746661 ~ 11748608 (-)
LOC110528752 agap1 coding downstream 68183 11463472 ~ 11746107 (-)
trnaa-ugc-134 NA coding downstream 244564 11569655 ~ 11569726 (-)
LOC118941094 ackr3 coding downstream 451041 11355677 ~ 11363249 (-)
LOC110519912 rgn coding upstream 78 11817344 ~ 11822607 (-)
LOC110495617 LOC106592068 coding upstream 5612 11822878 ~ 11834736 (-)
LOC110495627 LOC106592067 coding upstream 21257 11838523 ~ 11857115 (-)
LOC118941096 LOC106575679 coding upstream 45651 11862917 ~ 11868870 (-)
pjvk dfnb59 coding upstream 59847 11877113 ~ 11898774 (-)
G1517724 NA non-coding downstream 36465 11775165 ~ 11777825 (-)
G1517708 NA non-coding downstream 93792 11716290 ~ 11720498 (-)
G1517703 NA non-coding downstream 102086 11711591 ~ 11712204 (-)
G1517690 NA non-coding downstream 152664 11660768 ~ 11661626 (-)
G1517677 NA non-coding downstream 179318 11633615 ~ 11634972 (-)
G1517737 NA non-coding upstream 35690 11852956 ~ 11853274 (-)
G1517741 NA non-coding upstream 44104 11861370 ~ 11861937 (-)
LOC110527304 LOC106575687 non-coding upstream 122801 11926474 ~ 11972660 (-)
G1517796 NA non-coding upstream 158655 11975921 ~ 11979272 (-)
G1517807 NA non-coding upstream 176772 11994038 ~ 11995146 (-)
G1516784 unc80 other downstream 639807 11167621 ~ 11174483 (-)
G1516771 LOC106575823 other downstream 721846 11089229 ~ 11092444 (-)
G1516757 NA other downstream 765362 11048405 ~ 11048928 (-)
G1516562 LOC106575810 other downstream 957976 10853569 ~ 10856314 (-)
G1517784 NA other upstream 130299 11947565 ~ 11948345 (-)
G1517822 LOC106575686 other upstream 203506 12020772 ~ 12023228 (-)
LOC110512633 LOC106575771 other upstream 422968 12240234 ~ 12245743 (-)
LOC110495544 LOC106575695 other upstream 443526 12260777 ~ 12272188 (-)

Expression


Co-expression Network