ck073 (ck073)


Basic Information

Item Value
gene id ck073
gene name ck073
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 12281631 ~ 12288102 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951032.1
CTTTCTGGTTGCTTTTATTTTGAAACGTCAATCAAACCGGAAGTTCTCGTATACACGTGGTCTAAAGCAGAACATACACACGTAACTAAACATtggagttagctagctaactttctCGGGAGTTTTGTGAAATGGACTCAGCTGGTGCTATCGACAAAGTGTAAGACAGTCATCTTGACCGAAATATAAAGTAAACCAAGGACATTACAATGTTTGGATGTTTGGTTGCTGGTAGATTGGTCCAGACTGACGCCCAGCAGGTTGCTGGTGACAAGTTTGTCTTCAACCTACCAGACTATGAGAATGTGAACCATGTGGTGGTGTTCATGTTGGGCACAGTGCCTTTCCCTGCGGGGATGGGTGGAGCCGTCTACTTCTCCTTCCCAGACCCTGTCGGTGGGCAGGTCTGGCAGCTCCTGGGTTTCATCACCAACGACAAACCAAGTGCCATCTTTAAAATATCTCAATTAAAACCAGGTGAGGGTGGAGAGCATCCATTTGGAGTTATGACAGTACCTCGGCTTGCCTCCGTGGCCCAAGTTGGTGTGTCTATTGAGCCTTTGGAGCAGCTGGTCCAGCAGACGCCTGTATCAGGTGCCACTGTGTGCGCTGTTGACTCCTTTATGCAGttcACTCAGAAGATGCTGGACAGTTTGTATAATTTCTCCTCGTCTTTTGCCGTTTCCCAGTCGCAGATGACTCCAAACCCCTCAGAAATGTTCATCCCTGCCAGTTCCATCCTCAAATGGTAAAATGATTCCCTGTTGCTCATATTCAAAGTATGAGAACTTCCAGAGGCGCATGGCTCAAAACCCTAATTTCTGGAAGACTTGAGTTGTCTCAACGATACCACAGTGTTAAAAACCATGATAAAGGGGCATAGACAGAGAAGACCAAAGACTTCATTTTCTGTTCCAGAATGTCCAGGAATGGTCCTCCACAGAAGACGAAAATATTGTTTTATAGCAACAATTACTACATGTTTTGTCAAATATTAAACGTTTCTTAAAATTC
>XM_036951033.1
CTTTCTGGTTGCTTTTATTTTGAAACGTCAATCAAACCGGAAGTTCTCGTATACACGTGGTCTAAAGCAGAACATACACACGTAACTAAACATtggagttagctagctaactttctCGGGAGTTTTGTGAAATGGACTCAGCTGGTGCTATCGACAAAGTGTAAGACAGTCATCTTGACCGAAATATAAAGTAAACCAAGGACATTACAATGTTTGGATGTTTGGTTGCTGGTAGATTGGTCCAGACTGACGCCCAGCAGGTTGCTGGTGACAAGTTTGTCTTCAACCTACCAGACTATGAGAATGTGAACCATGTGGTGGTGTTCATGTTGGGCACAGTGCCTTTCCCTGCGGGGATGGGTGGAGCCGTCTACTTCTCCTTCCCAGACCCTGTCGGTGGGCAGGTCTGGCAGCTCCTGGGTTTCATCACCAACGACAAACCAAGTGCCATCTTTAAAATATCTCAATTAAAACCAGGTGAGGGTGGAGAGCATCCATTTGGAGTTATGACAGTACCTCGGCTTGCCTCCGTGGCCCAAGTTGGTGTGTCTATTGAGCCTTTGGAGCAGCTGGTCCAGCAGACGCCTGTATCAGGTGCCACTGTGTGCGCTGTTGACTCCTTTATGCAGTCGCAGATGACTCCAAACCCCTCAGAAATGTTCATCCCTGCCAGTTCCATCCTCAAATGGTATGAGAACTTCCAGAGGCGCATGGCTCAAAACCCTAATTTCTGGAAGACTTGAGTTGTCTCAACGATACCACAGTGTTAAAAACCATGATAAAGGGGCATAGACAGAGAAGACCAAAGACTTCATTTTCTGTTCCAGAATGTCCAGGAATGGTCCTCCACAGAAGACGAAAATATTGTTTTATAGCAACAATTACTACATGTTTTGTCAAATATTAAACGTTTCTTAAAATTC
>XM_036951034.1
CTTTCTGGTTGCTTTTATTTTGAAACGTCAATCAAACCGGAAGTTCTCGTATACACGTGGTCTAAAGCAGAACATACACACGTAACTAAACATtggagttagctagctaactttctCGGGAGTTTTGTGAAATGGACTCAGCTGGTGCTATCGACAAAGTGTAAGACAGTCATCTTGACCGAAATATAAAGTAAACCAAGGACATTACAATGTTTGGATGTTTGGTTGCTGGTAGATTGGTCCAGACTGACGCCCAGCAGGTTGCTGGTGACAAGTTTGTCTTCAACCTACCAGACTATGAGAATGTGAACCATGTGGTGGTGTTCATGTTGGGCACAGTGCCTTTCCCTGCGGGGATGGGTGGAGCCGTCTACTTCTCCTTCCCAGACCCTGTCGGTGGGCAGGTCTGGCAGCTCCTGGGTTTCATCACCAACGACAAACCAAGTGCCATCTTTAAAATATCTCAATTAAAACCAGGTGAGGGTGGAGAGCATCCATTTGGAGTTATGACAGTACCTCGGCTTGCCTCCGTGGCCCAAGTTGGTGTGTCTATTGAGCCTTTGGAGCAGCTGGTCCAGCAGACGCCTGTATCAGGTGCCACTGTGTGCGCTGTTGACTCCTTTATGCAGTCGCAGATGACTCCAAACCCCTCAGAAATGTTCATCCCTGCCAGTTCCATCCTCAAATGGTAAAATGATTCCCTGTTGCTCATATTCAAAGTATGAGAACTTCCAGAGGCGCATGGCTCAAAACCCTAATTTCTGGAAGACTTGAGTTGTCTCAACGATACCACAGTGTTAAAAACCATGATAAAGGGGCATAGACAGAGAAGACCAAAGACTTCATTTTCTGTTCCAGAATGTCCAGGAATGGTCCTCCACAGAAGACGAAAATATTGTTTTATAGCAACAATTACTACATGTTTTGTCAAATATTAAACGTTTCTTAAAATTC
>NM_001165102.1
GTATACACGTGGTCTAAAGCAGAACATACACACGTAACTAAACATtggagttagctagctaactttctCGGGAGTTTTGTGAAATGGACTCAGCTGGTGCTATCGACAAAGTGTAAGACAGTCATCTTGACCGAAATATAAAGTAAACCAAGGACATTACAATGTTTGGATGTTTGGTTGCTGGTAGATTGGTCCAGACTGACGCCCAGCAGGTTGCTGGTGACAAGTTTGTCTTCAACCTACCAGACTATGAGAATGTGAACCATGTGGTGGTGTTCATGTTGGGCACAGTGCCTTTCCCTGCGGGGATGGGTGGAGCCGTCTACTTCTCCTTCCCAGACCCTGTCGGTGGGCAGGTCTGGCAGCTCCTGGGTTTCATCACCAACGACAAACCAAGTGCCATCTTTAAAATATCTCAATTAAAACCAGGTGAGGGTGGAGAGCATCCATTTGGAGTTATGACAGTACCTCGGCTTGCCTCCGTGGCCCAAGTTGGTGTGTCTATTGAGCCTTTGGAGCAGCTGGTCCAGCAGACGCCTGTATCAGGTGCCACTGTGTGCGCTGTTGACTCCTTTATGCAGttcACTCAGAAGATGCTGGACAGTTTGTATAATTTCTCCTCGTCTTTTGCCGTTTCCCAGTCGCAGATGACTCCAAACCCCTCAGAAATGTTCATCCCTGCCAGTTCCATCCTCAAATGGTATGAGAACTTCCAGAGGCGCATGGCTCAAAACCCTAATTTCTGGAAGACTTGAGTTGTCTCAACGATACCACAGTGTTAAAAACCATGATAAAGGGGCATAGACAGAGAAGACCAAAGACTTCATTTTCTGTTCCAGAATGTCCAGGAATGGTCCTCCACAGAAGACGAAAATATTGTTTTATAGCAACAATTACTACATGTTTTGTCAAATATTAAACGTTTCTTAAA

Function

NR:

description
CK073 protein

GO: NA

KEGG:

id description
K23327 HIKESHI; protein Hikeshi

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951032.1 False 1014 mRNA 0.45 5 12281631 12288102
XM_036951033.1 False 923 mRNA 0.45 5 12281631 12288102
XM_036951034.1 False 954 mRNA 0.45 5 12281631 12288102
NM_001165102.1 True 931 mRNA 0.46 5 12281635 12288054

Neighbor

gene id symbol gene type direction distance location
LOC110495544 LOC106575695 coding downstream 9443 12260777 ~ 12272188 (-)
LOC118936562 LOC106594175 coding downstream 29082 12250356 ~ 12252549 (-)
LOC118941062 NA coding downstream 31175 12245879 ~ 12250456 (-)
LOC110512633 LOC106575771 coding downstream 35965 12240234 ~ 12245743 (-)
LOC118941032 LOC106575777 coding downstream 44285 12230271 ~ 12237346 (-)
LOC110497022 LOC106574871 coding upstream 42832 12330934 ~ 12342330 (-)
LOC110516060 LOC106575774 coding upstream 65950 12354052 ~ 12380993 (-)
LOC110528732 LOC105019714 coding upstream 181982 12470084 ~ 12506726 (-)
LOC110527216 nud15 coding upstream 264566 12552668 ~ 12553871 (-)
LOC118941039 NA coding upstream 283620 12571503 ~ 12583644 (-)
G1517899 eed non-coding downstream 3043 12275214 ~ 12278588 (-)
G1517889 NA non-coding downstream 52974 12227855 ~ 12228657 (-)
G1517885 NA non-coding downstream 60440 12220854 ~ 12221191 (-)
G1517842 NA non-coding downstream 120405 12105565 ~ 12161226 (-)
G1517905 NA non-coding upstream 6410 12294512 ~ 12294796 (-)
G1517907 NA non-coding upstream 9207 12297309 ~ 12297775 (-)
G1517918 NA non-coding upstream 20957 12309059 ~ 12309613 (-)
G1517919 NA non-coding upstream 21851 12309953 ~ 12310249 (-)
G1517924 NA non-coding upstream 28315 12316417 ~ 12318729 (-)
G1517822 LOC106575686 other downstream 259191 12020772 ~ 12023228 (-)
LOC110527304 LOC106575687 other downstream 309311 11926474 ~ 11972660 (-)
G1517784 NA other downstream 333286 11947565 ~ 11948345 (-)
G1518019 LOC106575703 other upstream 295626 12583728 ~ 12600331 (-)
LOC110495512 LOC106574713 other upstream 618109 12898791 ~ 12910954 (-)
LOC110513917 LOC106575727 other upstream 683551 12933662 ~ 13031321 (-)
bcor LOC106574692 other upstream 1096654 13312628 ~ 13402659 (-)
G1518858 LOC106574768 other upstream 1451349 13739451 ~ 13741567 (-)

Expression


Co-expression Network