LOC110527216 (nud15)


Basic Information

Item Value
gene id LOC110527216
gene name nud15
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 12552668 ~ 12553871 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021608380.2
GTACCGGAAGTGATATTCACGTGTCAACCTGGCTCGTTCCGTTCCGTTCGTTGCGGAGGAGGAGCTGTGCCTGGTGAAGTTGCCTGAAACGATAGAAGAGCATATGCCATAGCATGTGTTTATAGTAGAGCTATTTGCATATAGTTTTACTAACTGAATTACCGTGGTCTGATTTGACGAGATGACACAAAACTGCAGACCCCTCAAGCGCCCTGGTGTCGGAGTAGGGGTTCTTGTCACAGATTCAGCTCACTCCAGCTGCGTCCTCTTAGGGAAGCGAAAAAGTGCAATGGGCAAAGGAACGTATCAGCTACCTGGCGGTCATCTAGAATTTGGAGAGACATGGGAAGATTGCGCTCACAGGGAGGTGATGGAAGAGGCAGGAGTGCGCCTGAAAGAAGTAAGGTTCGCATCCGTGGTGAACTCCATCAAGCTCGATGAGCAGTACcactacatcaccatcatcatgcaAGGAGAAGTGGACAGGAGCTACCCATCAGAGCCAGTCAATCTCGAACCAGAGAAAAACGAAGgtTGGACATGGACACAGTGGGACCAGTTTCCTCAAGAGGACCAACTCTTCCTGCCTCTGGCCTGCCTGAGACAACAGGGCTTCCAGCCGTTCAACACCACATAACACTGCAGCTACCCagaaacagagaagagaggggcGAAACACAGGGATAGAAGACACATACATTAGAACTGCTTTGTAGGACCTAATCAAGTCAGGCAGTTGGGTATACATGGTAACGGTTGAACTAATGTTGATCAGCACCTTTGGTTGGGTAAACATGGCAACGGTTGCTGGACTTATGAGGGGACAACTCATGGATCTAACGGAAGGAAGTTATGACAACAAATCATTACGGTTTGAGTGTATTTATATCAATGAAATGTTAATGCAAAGCACACTGTACTACAAATAACCTGTATGTGTTTTGTCAATATTAAAAGGAACATAAGAAGTA

Function

NR:

description
nucleotide triphosphate diphosphatase NUDT15-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K03574 mutT, NUDT15, MTH2; 8-oxo-dGTP diphosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021608380.2 True 971 mRNA 0.47 3 12552668 12553871

Neighbor

gene id symbol gene type direction distance location
LOC110528732 LOC105019714 coding downstream 45942 12470084 ~ 12506726 (-)
LOC110516060 LOC106575774 coding downstream 171675 12354052 ~ 12380993 (-)
LOC110497022 LOC106574871 coding downstream 210338 12330934 ~ 12342330 (-)
ck073 ck073 coding downstream 264566 12281631 ~ 12288102 (-)
LOC110495544 LOC106575695 coding downstream 280480 12260777 ~ 12272188 (-)
LOC118941039 NA coding upstream 17851 12571503 ~ 12583644 (-)
LOC110495529 LOC106575665 coding upstream 58143 12612014 ~ 12616159 (-)
LOC118941036 NA coding upstream 111975 12665846 ~ 12677668 (-)
LOC110527208 LOC106575754 coding upstream 129238 12683109 ~ 12695620 (-)
LOC110527202 LOC106574654 coding upstream 275732 12829603 ~ 12833072 (-)
G1518000 NA non-coding downstream 2678 12542254 ~ 12549990 (-)
G1517999 NA non-coding downstream 14405 12538035 ~ 12538263 (-)
G1517998 NA non-coding downstream 16084 12536359 ~ 12536584 (-)
G1517987 NA non-coding downstream 52863 12499046 ~ 12499805 (-)
G1517970 NA non-coding downstream 107142 12445290 ~ 12445526 (-)
G1517981 NA non-coding upstream 399 12554270 ~ 12555049 (-)
G1517994 ipo5 non-coding upstream 8944 12562815 ~ 12566021 (-)
G1518044 NA non-coding upstream 97768 12651639 ~ 12653753 (-)
G1518076 NA non-coding upstream 151123 12704994 ~ 12705267 (-)
G1517902 NA other downstream 267036 12285078 ~ 12285632 (-)
LOC110512633 LOC106575771 other downstream 306925 12240234 ~ 12245743 (-)
G1517822 LOC106575686 other downstream 530228 12020772 ~ 12023228 (-)
G1517784 NA other downstream 604323 11947565 ~ 11948345 (-)
G1518019 LOC106575703 other upstream 29857 12583728 ~ 12600331 (-)
LOC110495512 LOC106574713 other upstream 352340 12898791 ~ 12910954 (-)
LOC110513917 LOC106575727 other upstream 417782 12933662 ~ 13031321 (-)
bcor LOC106574692 other upstream 830885 13312628 ~ 13402659 (-)
G1518858 LOC106574768 other upstream 1185580 13739451 ~ 13741567 (-)

Expression


Co-expression Network