LOC110495527 (LOC106575752)


Basic Information

Item Value
gene id LOC110495527
gene name LOC106575752
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 12833642 ~ 12837832 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951341.1
tcttcctgtctctcaggTCATTGCCCTCCCTCTCCGCCCGCTCTCTCCAGAGTTGTGCTCCACAGAGCAGCCAGGAGTAGAGAGGTGCCTCACCCAGAGATCAGGCCATGTTTCGGCTGTCCCAAACCTGtttccttctcctgctgctgcacGTCGTGGCCTCCGAGGTCTTCCTGAACAGTGACGATGCTAACCAGGTTCTGAACCGGCGGCGGCGGGCCAACAGCCCATTTGAGGAGTGGCGgcagggagacatggagagagagtgtATCGAGGAACGCTGTGACAGAGAGGAGGCTAGGGAGATCTTTGAGGACGACAAACTGACTACTGAATTCTGGAACACATATTACGATGGAGATGCCTGTGTTTCTAAGCCATGTGTCCACAATGGCGTCTGCAAGGACGGGATTGGGATGTACACCTGCTTCTGTCTCGCTGGATTCCAGGGGTACAACTGTGAGATTGCCATTCCTGAGCTGTGTGAGAATAAGAATGGAGACTGTGATCACTTCTGCCACGTGAAGAAGGACAGTGTGCAATGCTCCTGTGCTGATGGCTACTATCTGGACACAGACGACAAGTCCTGCCTTTCcaacgAGGCCTTTAAGTGTGGCTTTGTGGTATCCAAGAACACCCGCAGCATCTTCATCTACCAGCCTAACACCACTGCCACCAACACCACTGAAAAGACCAACATGATGGAGGACCCTATCAGGGAAACGGCCTGGAACGTAACCCAACAGAGAGAAATCCAATTTGCATTTGAGGATGACGTTATCGAAATGGTGAAGGAGAAGCCAGTCTTTGCCGAGGCGAGAGGCAACACCCGTATTGTCAATGGGGAGGAGTGTCCTCCTGGAGAATGTCCCTGGCAGgcTTTCCTGGTAAACCACGAGGACAGGGGCTTCTGTGGAGGAACCATCCTGAATAAGTACTTCATCTTAACGGCAGCACATTGCATGAACCAGACACGCTCCTTTTACGTTGTCCTCGGAGAGTTTGACACGGAGGTGAAGGATGGGCGGGAGGCCATCCACCAGGTGGAACAGGTGTTCATCCACAGGTCCTACATCTCCACCACCTATCACAACGACATCTCCCTCGTCATGCTGAAGGACCCTATCAAGTTCACCCAGTTcatcctccctgcctgcctgcctgaacGAGACTTTGCAGAGAAGGTGTTGATGAAACAGCACGACGGGCTGGTGAGTGGGTTCGGCCGTGTGGGGGAGGCCAAGCAGCCGTCCACCATCCTGCTGCGTCTGACCGTGCCCTACGTACCCCGGGCCACCTGCCTTCAGTCCAGCCAGCACAAGATCTCCAACCGCATGTTCTGCGCCGGCTACGATAAGGAGAAGAAGGACGCGTGCCAGGGGGACAGCGGAGGACCCCACGTCACCCGTTACGGGGACACTTGGTTCGTGACGGGTGTGGTGAGCTGGGGCGAGGGGTGCGCCCGTGAGGGCAAGTACGGCATCTACACGCAGGTGTCCAAGTACATCGACTGGATCCGGGCGGTCATGGGGAAGTTTCTCCccaaggagggagggaagaggaagacgaGGGGGGCAGGTAGAATGCACTCAATGATGTGGGTTTGAGGGAgacaaaggagagaggagaaccaATCATTAAAGAGGCTTGGGGAATTATGGGCAATAAACATTGTTGTGTGGTTTATCATTGTTTTTCACAAAATGTATCCAAGACCAAGTAACTTAAggtaaagaaaaaaacatgttttgtttgaATGTCCAGTTATCACATACCAACATTAAACTACATTACACAATATGAA
>XM_036951340.1
CTGTCTGTCATGCTGAAGAGTGCAGAGCTAAATGGTGGTCTGGACAAGGCCTTGCCTCTCTGAATGGTGAAGACTGGATTTGAAgTCATTGCCCTCCCTCTCCGCCCGCTCTCTCCAGAGTTGTGCTCCACAGAGCAGCCAGGAGTAGAGAGGTGCCTCACCCAGAGATCAGGCCATGTTTCGGCTGTCCCAAACCTGtttccttctcctgctgctgcacGTCGTGGCCTCCGAGGTCTTCCTGAACAGTGACGATGCTAACCAGGTTCTGAACCGGCGGCGGCGGGCCAACAGCCCATTTGAGGAGTGGCGgcagggagacatggagagagagtgtATCGAGGAACGCTGTGACAGAGAGGAGGCTAGGGAGATCTTTGAGGACGACAAACTGACTACTGAATTCTGGAACACATATTACGATGGAGATGCCTGTGTTTCTAAGCCATGTGTCCACAATGGCGTCTGCAAGGACGGGATTGGGATGTACACCTGCTTCTGTCTCGCTGGATTCCAGGGGTACAACTGTGAGATTGCCATTCCTGAGCTGTGTGAGAATAAGAATGGAGACTGTGATCACTTCTGCCACGTGAAGAAGGACAGTGTGCAATGCTCCTGTGCTGATGGCTACTATCTGGACACAGACGACAAGTCCTGCCTTTCcaacgAGGCCTTTAAGTGTGGCTTTGTGGTATCCAAGAACACCCGCAGCATCTTCATCTACCAGCCTAACACCACTGCCACCAACACCACTGAAAAGACCAACATGATGGAGGACCCTATCAGGGAAACGGCCTGGAACGTAACCCAACAGAGAGAAATCCAATTTGCATTTGAGGATGACGTTATCGAAATGGTGAAGGAGAAGCCAGTCTTTGCCGAGGCGAGAGGCAACACCCGTATTGTCAATGGGGAGGAGTGTCCTCCTGGAGAATGTCCCTGGCAGgcTTTCCTGGTAAACCACGAGGACAGGGGCTTCTGTGGAGGAACCATCCTGAATAAGTACTTCATCTTAACGGCAGCACATTGCATGAACCAGACACGCTCCTTTTACGTTGTCCTCGGAGAGTTTGACACGGAGGTGAAGGATGGGCGGGAGGCCATCCACCAGGTGGAACAGGTGTTCATCCACAGGTCCTACATCTCCACCACCTATCACAACGACATCTCCCTCGTCATGCTGAAGGACCCTATCAAGTTCACCCAGTTcatcctccctgcctgcctgcctgaacGAGACTTTGCAGAGAAGGTGTTGATGAAACAGCACGACGGGCTGGTGAGTGGGTTCGGCCGTGTGGGGGAGGCCAAGCAGCCGTCCACCATCCTGCTGCGTCTGACCGTGCCCTACGTACCCCGGGCCACCTGCCTTCAGTCCAGCCAGCACAAGATCTCCAACCGCATGTTCTGCGCCGGCTACGATAAGGAGAAGAAGGACGCGTGCCAGGGGGACAGCGGAGGACCCCACGTCACCCGTTACGGGGACACTTGGTTCGTGACGGGTGTGGTGAGCTGGGGCGAGGGGTGCGCCCGTGAGGGCAAGTACGGCATCTACACGCAGGTGTCCAAGTACATCGACTGGATCCGGGCGGTCATGGGGAAGTTTCTCCccaaggagggagggaagaggaagacgaGGGGGGCAGGTAGAATGCACTCAATGATGTGGGTTTGAGGGAgacaaaggagagaggagaaccaATCATTAAAGAGGCTTGGGGAATTATGGGCAATAAACATTGTTGTGTGGTTTATCATTGTTTTTCACAAAATGTATCCAAGACCAAGTAACTTAAggtaaagaaaaaaacatgttttgtttgaATGTCCAGTTATCACATACCAACATTAAACTACATTACACAATATGAA

Function

NR:

description
coagulation factor X-like

GO:

id name namespace
GO:0008236 serine-type peptidase activity molecular_function

KEGG:

id description
K01314 F10; coagulation factor X

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951341.1 False 1804 mRNA 0.53 9 12833642 12837526
XM_036951340.1 True 1872 mRNA 0.53 10 12833642 12837832

Neighbor

gene id symbol gene type direction distance location
LOC110527202 LOC106574654 coding downstream 570 12829603 ~ 12833072 (-)
LOC110527208 LOC106575754 coding downstream 138022 12683109 ~ 12695620 (-)
LOC118941036 NA coding downstream 155974 12665846 ~ 12677668 (-)
LOC110495529 LOC106575665 coding downstream 217483 12612014 ~ 12616159 (-)
LOC118941039 NA coding downstream 261253 12571503 ~ 12583644 (-)
LOC110495524 LOC106575751 coding upstream 2362 12840194 ~ 12844442 (-)
LOC118936561 LOC106575751 coding upstream 12258 12850090 ~ 12853780 (-)
LOC110512308 LOC106575728 coding upstream 19417 12857249 ~ 12862211 (-)
LOC118941031 LOC106574661 coding upstream 24497 12862329 ~ 12865373 (-)
LOC118941033 LOC106574652 coding upstream 31608 12869440 ~ 12874057 (-)
G1518095 NA non-coding downstream 85726 12747671 ~ 12747916 (-)
G1518082 NA non-coding downstream 114216 12719191 ~ 12719426 (-)
G1518076 NA non-coding downstream 128375 12704994 ~ 12705267 (-)
G1518044 NA non-coding downstream 179889 12651639 ~ 12653753 (-)
G1518134 NA non-coding upstream 43609 12881441 ~ 12882005 (-)
G1518100 creg1 non-coding upstream 44693 12882525 ~ 12885636 (-)
LOC110495512 LOC106574713 non-coding upstream 61048 12898791 ~ 12910954 (-)
G1518139 NA non-coding upstream 65999 12903831 ~ 12904177 (-)
G1518143 NA non-coding upstream 85245 12923077 ~ 12923360 (-)
G1518019 LOC106575703 other downstream 233311 12583728 ~ 12600331 (-)
G1517902 NA other downstream 548010 12285078 ~ 12285632 (-)
LOC110495544 LOC106575695 other downstream 570573 12260777 ~ 12272188 (-)
LOC110512633 LOC106575771 other downstream 587899 12240234 ~ 12245743 (-)
G1517822 LOC106575686 other downstream 811202 12020772 ~ 12023228 (-)
LOC110513917 LOC106575727 other upstream 133821 12933662 ~ 13031321 (-)
bcor LOC106574692 other upstream 546924 13312628 ~ 13402659 (-)
G1518858 LOC106574768 other upstream 901619 13739451 ~ 13741567 (-)
G1518991 NA other upstream 1133249 13971081 ~ 13972538 (-)

Expression


Co-expression Network