bcor (LOC106574692)


Basic Information

Item Value
gene id bcor
gene name LOC106574692
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 13312628 ~ 13402659 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951880.1
GGAACCAAGGCGCAGGCACTCATTCTCCGCTGTACGTCTGGAGGCGGTAGTTGTGAGTGCTCTGAATGGTGCCATACGGAAGAAAACGGAACAGTAAAACTAGGACGAAATAAAAAACTAATGGGAACATTGACAGAAACACCCTAGCCTCTCACTGAAGATAATGGGCACTGTTAGCATTCTTTATTTGTTGAAAACGGAAATTCTCGCCATATTTTTGAGGTGGCGTGTGTGCTGTATTGCGAGCTCAACATGGCGCTGCAATGCATAACCAGACTGAATATATTTATTGTTTATTGAGACCTACGACCGTTGTTGCCACCTGTGCTCCTTGAAACATTCACGACAACGATGCACTTGGTGTCTTTTTACTAATGGATATATTCACTGGGGGCAGAAACGTAACCTATCACTGCGACTCCGTGGATCTGTTCGTTCATTGTCGCGGACTCGTCATTCCCGGAGTTTTACCAACTGGAAATGTATAAAGACTAAGGATGTTTTCGTAGTCTAATCTTACCTACATGTCATTTAACAAGCACAACATTGTCACCCCTATTTGCTGTAAAGTTAAATTACAAAAGTGATATTAACCCCCGACGCACGAACTCTCGTTGGGTCGTTTTGACTGACTCGTGGATCCTAGAGAACACGGCCAAAAAGTTCCAACTGGACATTTTGCGTTTTGGCCAAGGACAATATAATTTAGAGAAATTATTCTGGAATTTCTATCAGGATTGTTCCAGTGAGGGATGGTGGGAGGCAGACTACCCATGTGGATCTAACCATCCAGGAACCACCACATCACACAAAGCATGGTGGATGCGAGTGCTGCTTGCAGAATGAACCCGCTAGCTGCCCTGGGCATGGACCGTAGCAGCCTGATGAGGGAGAGCCTCCGCGTCCACGGAGGGATGGTCTACCCGGGCATCCGCACCTTGTCCGCCTCCGAAAAAGCCAGGGAGGGGGTCTCCTCCTTGCCCCTGGGCTACGATCTAGTCTACAAACCCGAAGGGTTGaccttggatggcaggaagcctggtaACGGTTATGTGGGTCTGTATAAGAGCTCTCCCCCTGGGTTGCAGAGGcctggtggaggaggggagggcctGGGAATGGAGCGGCGTGTGGGGCCTGGAGATAAACCCTCTGAGCTGGGCCTCAACGGCAGCAACGGCTTCCTGCGACTGCCCTGGGCAGTAAACCCGTACGCGGACCCCGGACTGTACCCCTTCCTGGACTCCTCAAAATACGCAGCCCTCAACATGTACAAGGCCTCGTTCCTGTCCCAGCCCTCACCCTACCTGCCCCAGCACCTGGCCTACCAGTCCCTGTGTGGAGGGGCGGGGGGTAGCGCTGCTGGGGCAGAGCGCCTCTTCTACATGCCCCCGTACCCCCCGGCCCCCATCTCATCCCCCCTGGCCCCTCCTATGAGGATCCCCATGGCCACggtggtccccaacaccctctcCCCGATGCAGGGCCTGGGGCCCCGGATTCACCATGAGGCCTCCCCCTACGGGTCCCAGCTTCACCAGCAGCACCAGGCCCACCAGCAGTCCCAACCCCATCACCAGTCACACAGTGACAGGCAGCCCCAGTCCCAACCCCATCACCAGTCACATAGTGACAGGCAGCCCCAGTCCCAACCCCATCACCAGTCACATAGTGACAGGCAGCCCCAGTCCCAACCCCATCACCAGTCACATAGTGACAGGCAGCCCCAGTCCCAACCCCATCACCAGTCACATAGTGACAGGCAGCCCCAGTCCCAACCCCATCACCAGTCACATAGTGACAGGCAGTCCCAGTCCCAACCCCATCACCAGTCACACAGTAGAGACAGGCAGCCCCAGTCCCATAGTGACAGGcagcacaacaacaacagcagcagtagtaagcTCAGCCGGACTTCCTCTAGTAAGAGCTCTGGCAGCAGCAGCATTCACAACAGTAGCAGTAttaccagtagtagcagtagtagtgctGGGACTGGCATTAGCAGCAGCCTACCAGTGGACTCCACCCAAGCACTTATAATGCAGTCCCCCCGCACAGCCCCCCACCCTCCCCAGACCTcagtccctcccccctctcctctcgtaGACAACAGCACTTTGGACATCCAGAAGTCACTGTTCCGAAGCCCCCCctgctcctccaccaccaccacctcttcctCCCCGTCGGTGTCCCATCCTTTCTACATGAGCAGCATGGCCTCTGAGCACCGCTCCCCGGTGCGGTCCGGCAGCAACACCCACAAAGCCAAAGAGCAGTGCAGCAGCTCAGAGCACAGGAATGTGGAGAGGAATGGGGAAAGGAAGCGGAGCCAGTCCCCTTTAAAGACTTTTTCCTCTGATAGACCAGCAGTACTACAGGCTCCTGCCAAAGACCCTGCGGACAAGCCTCTGGATCTGTCAGCCAAAATCCTGGAGTTGGAAGGCTCCCCCAACGGATTCCCCCCAAAACTAGAGGCCTTGGCTAAGCTGGGCTACTCGCCCGCGGCTCGATACGGCTTACCCCCCAGCCGGGAGCTCCTCAAAGAGACCCTCTCCCCGTCAGGGGCTTCCTCCAAAACCTCTGAGAGGCCTGAGATCATTAGCACTTTACGCTCCTCCTGGGTGGTTCCCAGCCCGACCCCGGTCCACGACAGCTCCAGCTCAGACGTCAACCACAACAAAGACCCCTCCGTCATCAAACATAAAAACCTGGAGAACTTGTCTTCGACGCAGCAGCGAAGCTCTTCCTGTCCCAGGATAGGTGAGGTCGATGGGGCTGTCGCCCCCAGCCATGCCCCAGCTGTGGTAGCCCCTTCTGGGAGCCGACCatcctctgcctccccctctcccaagGTCAACGGTGATTGGCCAAGATCCTCCCCCAACTACTCTGAGACAGCCCCTTCTTCCAACAGAGTGGGCAGCCATCCCTCTTCTGGGAAACCCCTGAAGAAACCAGAGGCTCAGGAGATGCCCTTCAAGCCCCAGCAGCCGCCCCACTTAGACAACAGCCATCCGTCCGGCCACCCCCCCAGCCACCTCTACCTCCCCCAGAGTGACGGCTATCTGCCCCCTAGCCTAGCCTACGCTAATAGATACCTGCCCTACTCGGTCCAGGAGAGCATGTCCCTGCCCCACATGCCTATGCCAGGCAAAGGCCCAGTGTACCCCCACCCTGTTCTTCTGGGTAGCAGCAACCTGTACCCACCCCGCCTGCCCCCCAAGCACGGCCTCCCGTACGGCATCCCCCCCAGCCACGGGGACTACCTGACCTTCCATGACTCCCAGGAGATGGTCCACCCCCTCATGTCCTCCCCCCACACAAGCCTGGACCTCAAGACCAGCGAGCGCCTGCAGGAGCTCAGATCCAGGCCCAAGGAGAAGATTTGGCAGCACCACGAGGGCTCTGCCCCGGCCTACAAGACCCAGGCCCCAGACACTAAACACACCcgcaggggggacagagagaccgACAGGTCCACAGGCCTGGGCTCAAAGAGCCTCAACCATAAGCCCCTGATGGGAGCTAGAGAGGAGATAGTCTGTATCGACTTAATCCAAGACGATGGGGACAGCGACTCTCCCCTGACCAAAGCTGTCTCTCCATGCGCTAAGAGAGGAGACCCTTCCAAACCTGTGGGTAGTGGGAGTATCGGGAGAAAcgaggggagagaggcagagctcCAGCACATGCTCCGTACCGGCCAGGCTGTTGAactcaggccaggccaggcccaCAGGCAGGCAGAGCAGCAGCAACGCAGCCAGCTGTGGCTGGGcttccacccttcctccctccgtccctctcccccctccctctccccctgcccttTCCCCAGACATGAGGAGGACAGCCCCAGCCCTGCAGAAAGCAGCCCCATCTCTGACCTGCCAGAGGAGCAGACCCTTCGCTGCGCAAGGACTTCTGGAGACCGCACCTCTTGGGACCGTAGAGACCAATCTTTAGAGGGCCTTAAGAGCAGGGACTGTACTTTTGAGGACCCCACCTCTGTGGACCGTAGTTCTGGGGACCGCAGTTTCTGGGACCATACGCATGAGGACTGTACTTTTAAGGACCGCAGCTCTTGGGACCGTACACGTGTGGATCTTACATGTAGGGTCCGCTCTTGCGAGGACCGCACCTCCGCAGACCACTCTCCTAGGGAACGCACCTTGAACGAATCTGGGTTTAGGAATGAAAGGACCATGGACCACTACTCGGACCTGGACAAGGACATGCACACGGACACAGAGTCCCACGAGGGTGAGGAGTACGACGACCAAGGCTGCCCCAGGGCCAGGAGGTCCAGCCTGGCCAAGCGCATCGCTAACTCCTCTGGCTACGTTGGTGACCGCATCAAGTGTGTCACTACCGAGCTGTACGCCGACTCCAGCAAGCTGAGCAGAGAGCAGCGGGCACTGCAGATGGAAGGCTTAACACAAGAGGACAGTAAATTAAGTCAACCTGCTGCTTACTGTGAGcgtGCTATGCTGCGCTTCTCTGAGCTGGaactgaaggagaaggagggaggaggggcggCGGTGGACTTGGCAGACAGCCAGCGCGAgcggagagagggggatggagatggaggagaggacagggcgCGATGCCAAGGCCCAGCCAGAACGGGGCCAGGGGCCTCAGCCCTCACAGACGAGGCTGAGAAGGACGgtgTGCAGCTGACGTGCCCCAACAACAGAGTGCCTGTTCTCCAGCGATGCCCACACACTGAGGGCCTCccacccagagagagggagcagtctGGCCCCgacctggaggagaggaagagggggatgatgctggaaaaagaggagagagtgtATGTGCTCCCACGGGAGCGGTCTGCCAGCCTGCCCACGGCCCCAGTGGAAAGGCTGGCCCAGAAGGATGCCAACCCTGGCATCATGCCCACCATGCCAGCCTCCATGCCCACAACGGTGCCTGGCAGGAAACACGCATATGCCCTGGAACCGTGCCAGCCACTCCAGGCCGACAGCCAGGGGAAAGAGCGGGAGGAaaatgagagagaagaggagaaggaggagacgaTGGATGTTTCAGCCAAAAGAGCCAGGCTAACCAACGGCCCCACTGACCCCGTCCCAGAGGAACTAAAGAACCTCAAGGTGTGTATTGAGCTGACCGGCCTCCGACTCAGCAAGCCCCGCCTCGCCCAGGAGCTCAGCCAATGGCAGGCCGCCACCCAGAGGTCGACAGAGGTCAACGGAAGCATGGCCATGACGACGACCCTGCCCAACGGGTGCCCCGAGGTTGGCGTCACAGACAGGAAGGTTGCCTCACAGGAAGACCGGCGCCTGAAACGCAGGTCAGAGGTCAACGGCCACGCCTGGTGCCATGAAACGTTTGGTCACGGCGACATCGAGCGAGtGGTGCTGCCGTCTGTTCCTCTGACCCCAGCGCATCGGGACCGCCTCTACCGGACTCCGTCCACCACCCCTGTCAGAAAACCACCCCTGCAGACCCCCACCCCTGCCCTCACCCCCTTTCACTCCCTGGCCCCTGCACACCCCCACATCACCCTCACCCCCAGCCCTCCACGGCTGTCAGACAAGAGACAGAGGCTAAAAGAACACCGCAGGACCAGCGCTTTGGGACTGGGACCCTCCGGCCCTCACCCCGaccatgaccctaacccaacGGGGGACCTAGTGGCCCCCAGACTCCGTTGGCACGGCGACCAGGACAAGCCCAAGGGCAAGCGGCAGTGCAAGactaaacacaccagccagagggagagggagagagagagactggggaatgAAGaactgagggaagagagggatagaaagaagCTGGGGAATGAAGaactgagggaagagagggagagagagaagctgggGAATGAAGaactgagggaagagagggagagagagaagctgggGAATGAAGaactgagggaagagagggagaataagCAGGTCAAGGAAAAGCGATGCAGCGAGAAGCGGAGGAGGTCTTCATCCCTGTCGGATTACTCCCACTCCTCCCCCGCCCCCCCTCTCACCCCGCCCCCCCAGCTCAGCCCTCTGCCCAGCCCTACAGAGACCCAGGACCGCACGCCAACCCCCTCCAACCCCCCGGTGCCCACTTCTACCCCTGCCAGCCGACCCATGCCTCCTGAGGCCCGCAGGCTCATCGTCAACAAGAACGCAGGAGAGACCCTGCTCCAGAGGGCTTCCCGCCTAGGATACGAGGATGTAGTGCTGTACTGCCTGGAAAACAGGGTGTGTGACGTCAATCACCGTGACAACGCGGGCTACTGTGCGCTGCACGAGGCATGTGCACGTGGCTGGCTTGCTATCACTCAGCACCTGCTGGAGCACGGTGCCGACGTCAACTGTAGCGCCCAGGAAGGCaccagGCCCCTACATGACGCGGTGGAGAATGACCATCTGGAAGTGGTCCGTCTGCTGCTGTCCTACGGAGCTGACCCAACCCTGGCTACGTACTCTGGCCGCAGCCTCCTCCGCATGACACACTCCCACGGCATGGAGGGATTCCTCTCTGagTATTTTTCCGACCTGAAGGGGCGTGAAGACACTGACGAAGGCATCTACTGGGAGTTTTACGGCAGCGCCGTGTgtgagtcAGGTGAGGACCCAGCAGCCTATGACATCCTGGCTAACCCCCCAGgcccaggagaggaggaggaggaggactcgAGGCAGGGCTTTGAGTTTGAGTTCTCTGACCGACCCCTCCTGCCCTGCTACAACATTCAGCTCTCCCTCTCACAGggTCCCAGAAACTGGCTGCTCCTATCAGACGTCCTGAAGAGACTCAGAATGTCCTCCAGGGCGTTCAGGGCAGCCTTCGCCCATCTGGAGGTAGCAACCATCGCCGAGGCAGAGTTCTACAAGCAGGCGTCACTGTCGCAGCTCTTCTCGTGCCCCGACGAGCTCGCCGCCTTCCTCCCCGACAGCAAGGAGCTGCTGGACCTGGTTGAGACCAGCTCGGAGCTGGCTGCGCTGCTGGGCTCCTCGCTAGAGTGTTTGGACAGCCGATGGGAGCCCAAAGGGGCCCGGGTCAAAGCTAAAGCCCGCTCGTGACcctgagatacacacacagagggtgACTCTCAATAAGATCTACTTTCTCCTGAAGTGGACACTCCTTCACTAGTTCCCACAAATCTGGTGCAGTTATTTGGCTAGTGGTAGTTTTCCACCATGTTTCTTATACCAGTCCTTTCCTTTCAAATcggtgaagggaagtgaacactTTGGGAGGAAGTTGAGAGTATTGGGAcgtagccaacacacacacatgctccatGTGTACGTTCCCCTGCCCTGTGAGGACTGGATGTTGAATACTGGACAGTATCCCTTCAAAGAGGAAACAGACCCCAGCGCCACACAAACtgcatttttaaaataaatatattatatatgtataccGATTTAATttgttctatatatatatatatatatatatgtatgtatatccATACTGTATATCTGCTGCTTTGGTTGTCATGTTGTGGTCAggttgtgggttttgacactgtTTGGGTTGACTAGGCTAGTGAACAGGTCATTGTTTGACTTTGGATCATGGCAGTGCACTTGATTTGAGCTTTACCGACCCATTGGACTTtgacagatatatatatagaggtgaACTGTGACAAAAACATTTTAGCACTCATGGCTCATCCCAAAGATTTGGGGATTTTATTTTCAACATTGTCTAAAAACCTAGCTTTATTTGTCTCTTATTTATGACAATGAGGAATTCAGATATTTGATGTGGGTTTTTTGTCAAATATAAATGTAAAATACTACAAGACATTTCAATTGAAGAGTGAGATTCATGCTTGAACTTGTAAATAAGATGACCATTTCAGTAACTGTTTTTCTGACTGGGgtgtttggtttgtttgtttaggCAATGTAAGTGTTTAAACTTTGTAATTAAATACacttatttgtatttatattttacaAAAAAGTTCATTTAAATAAATCGCAATAAAAGTGAACCTTTATCGTA
>TU1738554
TGGAGGCGGTAGTTGTGAGTGCTCTGAATGGTGCCATACGGAAGAAAACGGAACAGTAAAACTAGGACGAAATAAAAAACTAATGGGAACATTGACAGAAACACCCTAGCCTCTCACTGAAGATAATGGGCACTGTTAGCATTCTTTATTTGTTGAAAACGGAAATTCTCGCCATATTTTTGAGGTGGCGTGTGTGCTGTATTGCGAGCTCAACATGGCGCTGCAATGCATAACCAGACTGAATATATTTATTGTTTATTGAGACCTACGACCGTTGTTGCCACCTGTGCTCCTTGAAACATTCACGACAACGATGCACTTGGTGTCTTTTTACTAATGGATATATTCACTGGGGGCAGAAACGTAACCTATCACTGCGACTCCGTGGATCTGTTCGTTCATTGTCGCGGACTCGTCATTCCCGGAGTTTTACCAACTGGAAATGTATAAAGACTAAGGATGTTTTCGTAGTCTAATCTTACCTACATGTCATTTAACAAGCACAACATTGTCACCCCTATTTGCTGTAAAGTTAAATTACAAAAGTGATATTAACCCCCGACGCACGAACTCTCGTTGGGTCGTTTTGACTGACTCGTGGATCCTAGAGAACACGGCCAAAAAGTTCCAACTGGACATTTTGCGTTTTGGCCAAGGACAATATAATTTAGAGAAATTATTCTGGAATTTCTATCAGGATTGTTCCAGTGAGGGATGGTGGGAGGCAGACTACCCATGTGGATCTAACCATCCAGGAACCACCACATCACACAAAGCATGGTGGATGCGAGTGCTGCTTGCAGAATGAACCCGCTAGCTGCCCTGGGCATGGACCGTAGCAGCCTGATGAGGGAGAGCCTCCGCGTCCACGGAGGGATGGTCTACCCGGGCATCCGCACCTTGTCCGCCTCCGAAAAAGCCAGGGAGGGGGTCTCCTCCTTGCCCCTGGGCTACGATCTAGTCTACAAACCCGAAGGGTTGaccttggatggcaggaagcctggtaACGGTTATGTGGGTCTGTATAAGAGCTCTCCCCCTGGGTTGCAGAGGcctggtggaggaggggagggcctGGGAATGGAGCGGCGTGTGGGGCCTGGAGATAAACCCTCTGAGCTGGGCCTCAACGGCAGCAACGGCTTCCTGCGACTGCCCTGGGCAGTAAACCCGTACGCGGACCCCGGACTGTACCCCTTCCTGGACTCCTCAAAATACGCAGCCCTCAACATGTACAAGGCCTCGTTCCTGTCCCAGCCCTCACCCTACCTGCCCCAGCACCTGGCCTACCAGTCCCTGTGTGGAGGGGCGGGGGGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951880.1 False 8025 mRNA 0.56 14 13312628 13402659
TU1738554 True 1317 TUCP 0.51 3 13384756 13402621

Neighbor

gene id symbol gene type direction distance location
LOC110495506 LOC106574645 coding downstream 210950 13084843 ~ 13101678 (-)
LOC110495504 dylt3 coding downstream 227898 13081819 ~ 13084730 (-)
LOC110513917 LOC106575727 coding downstream 281307 12933662 ~ 13031321 (-)
LOC110519411 dusp27 coding downstream 389898 12912019 ~ 12922730 (-)
LOC110495512 LOC106574713 coding downstream 401674 12898791 ~ 12910954 (-)
LOC110495500 cd80 coding upstream 3755 13406414 ~ 13409467 (-)
cd80 cd80 coding upstream 18723 13421382 ~ 13439064 (-)
LOC110495499 LOC106575543 coding upstream 63245 13465904 ~ 13470070 (-)
LOC110495493 NA coding upstream 282547 13685206 ~ 13699630 (-)
LOC110497005 LOC106574767 coding upstream 304735 13707394 ~ 13711944 (-)
G1518287 NA non-coding downstream 12759 13299637 ~ 13299869 (-)
G1518273 NA non-coding downstream 28965 13283327 ~ 13283663 (-)
G1518251 NA non-coding downstream 80944 13231409 ~ 13231684 (-)
G1518229 NA non-coding downstream 117997 13193288 ~ 13194631 (-)
G1518225 NA non-coding downstream 128218 13179206 ~ 13184410 (-)
G1518706 NA non-coding upstream 13368 13416027 ~ 13481973 (-)
G1518716 NA non-coding upstream 47456 13450115 ~ 13451916 (-)
G1518735 NA non-coding upstream 81185 13483844 ~ 13484331 (-)
G1518749 NA non-coding upstream 95669 13498328 ~ 13499343 (-)
G1518019 LOC106575703 other downstream 712297 12583728 ~ 12600331 (-)
G1517902 NA other downstream 1026996 12285078 ~ 12285632 (-)
LOC110495544 LOC106575695 other downstream 1049559 12260777 ~ 12272188 (-)
G1518858 LOC106574768 other upstream 336792 13739451 ~ 13741567 (-)
G1518991 NA other upstream 568422 13971081 ~ 13972538 (-)
G1519529 LOC106575569 other upstream 1082020 14484679 ~ 14486096 (-)
LOC110495482 LOC106575623 other upstream 1103741 14506227 ~ 14507592 (-)
LOC110495477 fundc1 other upstream 1178310 14580962 ~ 14587615 (-)

Expression


Co-expression Network