LOC110495482 (LOC106575623)


Basic Information

Item Value
gene id LOC110495482
gene name LOC106575623
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 14506227 ~ 14507592 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021570755.2
GGTGTCGTCGAATATTTAAAAAGTCTAAACAAGTTGTCAATGAGGAGGAAGGAAATATAAAACCTCACCATCCACGTCGCCAGGGTTGTATTCGCCAGCTATCAACAGAAGGACAGGATGGCTTGCTCTGACAGCTGCCAGTGCCTCGGCGAAAGGGGACAAAGAAGCATCCTTTACAGCATTTTGAAAAACGACAACCAACCGAATCAGCATTCACAGGGGCGGGCGAGGTTCGCGGTCCCGCAACAGCAGCCTTGTTCGTGTGGATCTAAGAAGAAAGTGGTTCTCCGTTCTCCCCAGACAACGTGTAAAGCAGCGTCGGTAGCGCTTTTAAAAACGCTGAAGTTTGTTAAAAATGTACTTTGTTTTCGGGAACTTCCAGCGGAGGACCAGTTACAGCTCGTGCGCAACAGCTGGGCTCAGCTGCTTGTTTTGGGCATTGCGCAGGACTTGATCGACTTCGAGACCATGGAGACGCCAGAACTCAGTATGTTACAGAACATACTAACCAGCGGACAAGGAAGACAGGAGACCGCGCACGGGCGCAGTGGCCAAGGCGTTTCTCTCACTGATGTCCAAGgaataaaaatgtttttgaatAAATGTTGGGGACTGGACATCAGCACCAAAGAATATGCATATTTAAAGGGAGCCATTCTCTTCAATCCAGACATTGCAGAGCTCCGGTGTCAAAGCTACATTCAGGCACTGCAGAGCGAAGCGCATCAAGCCCTTAGTGAATATGTGAAAGTCACTCACCGAAGAGACTCTACAAGGTTCACTAAACTATTCATCGCGCTCTCCATGCTACGGTCCATCAATGCAAACGTCGTGGCTGGACTTTTCTTCAAACCTGTCATCGGCACGGTCAGCATGAATGAACTTCTGCTCGAGATGTTTTACGGAAAATAGACTGAATAAACTGTTTAAAGACTGAACACAGACAAAGCTGTGGGCTGGACTGGAGGCTGAACAGAATAACAACAGGCATGTGTATACTGTAGGGTTGCTATccatatgtatttattttgctatAACGCATCCTATTTTTGTAAAATAAAAGTGTTT
>TU1739599
AGAAAGTGGTTCTCCGTTCTCCCCAGACAACGTGTAAAGCAGCGTCGGTAGCGCTTTTAAAAACGCTGAAGTTTGTTAAAAATGTACTTTGTTTTCGGGAACTTCCAGCGGAGGACCAGTTACAGCTCGTGCGCAACAGCTGGGCTCAGCTGCTTGTTTTGGGCATTGCGCAGGACTTGATCGACTTCGAGACCATGGAGACGCCAGAACTCAGTATGTTACAGAACATACTAACCAGCGGACAAGGAAGACAGGAGACCGCGCACGGGCGCAGTGGCCAAGGCGTTTCTCTCACTGATGTCCAAGgaataaaaatgtttttgaatAAATGTTGGGGACTGGACATCAGCACCAAAGAATATGCATATTTAAAGGGAGCCATTCTCTTCAATCCAGACATTGCAGAGCTCCGGTGTCAAAGCTACATTCAGGCACTGCAGAGCGAAGCGCATCAAGCCCTTAGTGAATATGTGAAAGTCACTCACCGAAGAGACTCTACAAGGTTCACTAAACTATTCATCGCGCTCTCCATGCTACGGTCCATCAATGCAAACGTCGTGGCTGGACTTTTCTTCAAACCTGTCATCGGCACGGTCAGCATGAATGAACTTCTGCTCGAGA

Function

NR:

description
nuclear receptor subfamily 0 group B member 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021570755.2 False 1068 mRNA 0.47 2 14506227 14507592
TU1739599 True 621 TUCP 0.48 2 14506400 14507318

Neighbor

gene id symbol gene type direction distance location
LOC110495488 LOC106575654 coding downstream 631665 13865384 ~ 13874562 (-)
LOC110495489 LOC106575650 coding downstream 672821 13803381 ~ 13833406 (-)
LOC110495490 LOC106574769 coding downstream 706221 13795409 ~ 13800006 (-)
LOC110495492 NA coding downstream 727396 13730360 ~ 13778831 (-)
LOC110497005 LOC106574767 coding downstream 794283 13707394 ~ 13711944 (-)
LOC110495480 LOC108249344 coding upstream 22989 14530581 ~ 14578088 (-)
LOC110495477 fundc1 coding upstream 73370 14580962 ~ 14587615 (-)
LOC110495478 NA coding upstream 135483 14643075 ~ 14662564 (-)
LOC110497004 LOC106575641 coding upstream 164574 14672166 ~ 14740105 (-)
LOC110495458 LOC106575627 coding upstream 243993 14751585 ~ 14752539 (-)
G1519535 NA non-coding downstream 10302 14495694 ~ 14495925 (-)
G1519532 NA non-coding downstream 13661 14489696 ~ 14492566 (-)
G1519531 NA non-coding downstream 16632 14489378 ~ 14489595 (-)
G1519530 NA non-coding downstream 16979 14486713 ~ 14489248 (-)
G1519524 NA non-coding downstream 27203 14478622 ~ 14479024 (-)
G1519570 NA non-coding upstream 7718 14515310 ~ 14515523 (-)
G1519574 NA non-coding upstream 17789 14525381 ~ 14525666 (-)
G1519575 NA non-coding upstream 19383 14526975 ~ 14527514 (-)
G1519987 NA non-coding upstream 28525 14536117 ~ 14536640 (-)
G1519996 NA non-coding upstream 57554 14565146 ~ 14565460 (-)
G1519529 LOC106575569 other downstream 20131 14484679 ~ 14486096 (-)
G1518991 NA other downstream 533938 13971081 ~ 13972538 (-)
G1518858 LOC106574768 other downstream 764660 13739451 ~ 13741567 (-)
bcor LOC106574692 other downstream 1103606 13312628 ~ 13402659 (-)
LOC110513917 LOC106575727 other downstream 1529786 12933662 ~ 13031321 (-)
G1520339 NA other upstream 768471 15276063 ~ 15277021 (-)
LOC110495442 LOC106574707 other upstream 991316 15434412 ~ 15500787 (-)
G1521308 NA other upstream 1040284 15547876 ~ 15548483 (-)
LOC110495443 LOC106574666 other upstream 1095245 15601688 ~ 15604709 (-)

Expression


Co-expression Network