LOC110495652 (LOC106575579)


Basic Information

Item Value
gene id LOC110495652
gene name LOC106575579
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 15843210 ~ 15848190 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951986.1
ataaaaaagtaaaacCTTGCGCTTTGCCTTTGAAATAGTCCAGAGGCTAAGCTTATTTAATTGAAACGAATTATAtatatttcaggttttatttccaAAGTGATCGTGTAGCAGTATGGCCTCCATATAGCAGTAGCTAAGATGTTATGTAATAAACGTAAGCAGCGGTGTCTGCTGGTTACGCAAAGGGCTAGATATAGCCATTTTAGCATGAAGTTAGCTTGTTTTGTCAGTACTGTAAAGCGGTCTCATACAAAGCGAAATCGGACTCTTCCCCGCCGTTTAAGCTAGATTTTGAACGTCGTCTCCAAGCAATGGCTCTGATGACATCGACAAGAAGACTATTTCATGTTTCGTTCCGAGAAAATTCTCTACGGCGAGCAGAAGCACTTATTTCAGCAACAAACACAACTTCGGGGAATTTATCATTGGCCGGTCAACGAATGGCCTGTATTCGTGTAAGGGATTTTGGCACCAACACACAACCTCTTAGAGCTGACAATAAGGTGACGGTCCACTTCACCAATCGAGATGGAGAGAAGATCTCTGTCAAAGGCTCTCCTGGAGACTCTCTCCTAGATGTCATTATCGACCAGGACCTCGATTTTGATGGGTTCGgtgcATGTGAGGGGACACTGGCCTGTTCTACCTGTCACCTGATCTTTGAGGAAGATGTGTATAATAAGCTGGGCCCCATTACTGACGAGGAGATGGATATGCTGGACCTGGCCTACGGACTCACAGAcacGTCCCGCCTGGGTTGCCAGATCTGCCTGACCAGGTCCCTGGAAGGCATGACAGCGAGGGTGCCTGAGAGTGTGGCAGACATCCGACAGAGTGGAGACGGGTCCTCATAATGGCAATCCCAGACCAGAGTAATAGTTGTACTGAAATTTGCTCAAATCAATGCTTTATTTCAACACTAGCATGACCAAATAATGCCCAATTCTAAGTGGTATGTTGTTATAAATGTCGAAATGGAAGACACCGTATTTATAGAGATTATGAGATATTAACATTTGAATGAGTCCCCATCATAGTTTTACATTCACTTTATACAGGGAACAATGGGGAAAGTTGGCAAATAATTCCTCTGTGGCAAGCAGGTTCTGGAGAATAGAAGAAAGTTTAGATTGAAGTCTccaatcagccccccccccccgtccttaACGGTTGTGAAGTagtatatactgaacagaaatattaATGCAACAAtctcaaagattttacagagttagtTGATatgaggaaatctgtcaattgaaataaataaattaggtcctaatctatggatttcacatgactgtaaaTACAGATATGCGTCTGTTAGTTATAGATATTTTAATAGAAATGGGCCTCGGCATCTCATTACGGTGCtcatgtgcattcaaattgccatcgataaaatgcagttgtgtttgtggcttatgcctgcccataccataaccccactgccaccatggggcactctgttcacaacgttgacatcagcaaaccgccatacacatggtctgaggttgtgaggctggttggacattcTGCCCAATTCTCTAAAataacgttggaggcagcttatgttagagaaatgaacattctattatctggcaacagctctgatggacctTCCTGCAATCAGCCTGCCAATTGCAAACTCCTTCAAacttgtgacattgtgttgtgatgAAACTTGAACATtttagtgaccttttattgtccccagcacaaggttcacctgtgtaatgatcatgctgtttaatcagcttcttgatatgccacacctgtcaggtggatagattatcttggctaTGATacgagagaaataagctttttgtgcatatggaacatttctgggatcttttctttcagcttatgaaacatgggaccaatattttacatgttgcatttctatttttgttctgtgtagatGTTCTCCAGTGAATGTAAGGGGTTATGATCACTTTCATAGTCCACTACCTCCCTGGTGAGTACTTAGAAATAACACATTCAAATAGTTGTTTTTTGTGCTATTATCAATTACCAATACACGTTACCAATTGTACTGAATTCTTTAAAATAAGTACCAAGAAGTGCAGCTTGTCACCATGTAGTTTCTGAGTAAATACCAGCTGAAACAGGATTGTAAAGTCACCCATCCAGACTTCAGAATGACACCCATTAATCTGGCCAGAGGCGAGACTGGTTAGGATGCCTTATCTTGTCATTTTTATGGCCACCCTAGCCTTTGTTTTATCAAGTTGTGTACCGTTACTGTCTTTAGTGTTGTCCTACCACTCGTGTAACCAAATTTTAATTTCATATTCCACGTGATTGTAAATAGCACTCATCTGTGTATAGTCAGAGAAATTCTGTATTAAAATTGACTTTCTAATTTGTCTGATTTTTCTCTG
>XM_036951987.1
AAGCCAGCAGCAACAACGTAAACGTCAACATCCTGTGAACAAAACAAGAAGCAAAGAAGAGAAAAAATGGATGACTCAGACAGAGCTGACAATAAGGTGACGGTCCACTTCACCAATCGAGATGGAGAGAAGATCTCTGTCAAAGGCTCTCCTGGAGACTCTCTCCTAGATGTCATTATCGACCAGGACCTCGATTTTGATGGGTTCGgtgcATGTGAGGGGACACTGGCCTGTTCTACCTGTCACCTGATCTTTGAGGAAGATGTGTATAATAAGCTGGGCCCCATTACTGACGAGGAGATGGATATGCTGGACCTGGCCTACGGACTCACAGAcacGTCCCGCCTGGGTTGCCAGATCTGCCTGACCAGGTCCCTGGAAGGCATGACAGCGAGGGTGCCTGAGAGTGTGGCAGACATCCGACAGAGTGGAGACGGGTCCTCATAATGGCAATCCCAGACCAGAGTAATAGTTGTACTGAAATTTGCTCAAATCAATGCTTTATTTCAACACTAGCATGACCAAATAATGCCCAATTCTAAGTGGTATGTTGTTATAAATGTCGAAATGGAAGACACCGTATTTATAGAGATTATGAGATATTAACATTTGAATGAGTCCCCATCATAGTTTTACATTCACTTTATACAGGGAACAATGGGGAAAGTTGGCAAATAATTCCTCTGTGGCAAGCAGGTTCTGGAGAATAGAAGAAAGTTTAGATTGAAGTCTccaatcagccccccccccccgtccttaACGGTTGTGAAGTagtatatactgaacagaaatattaATGCAACAAtctcaaagattttacagagttagtTGATatgaggaaatctgtcaattgaaataaataaattaggtcctaatctatggatttcacatgactgtaaaTACAGATATGCGTCTGTTAGTTATAGATATTTTAATAGAAATGGGCCTCGGCATCTCATTACGGTGCtcatgtgcattcaaattgccatcgataaaatgcagttgtgtttgtggcttatgcctgcccataccataaccccactgccaccatggggcactctgttcacaacgttgacatcagcaaaccgccatacacatggtctgaggttgtgaggctggttggacattcTGCCCAATTCTCTAAAataacgttggaggcagcttatgttagagaaatgaacattctattatctggcaacagctctgatggacctTCCTGCAATCAGCCTGCCAATTGCAAACTCCTTCAAacttgtgacattgtgttgtgatgAAACTTGAACATtttagtgaccttttattgtccccagcacaaggttcacctgtgtaatgatcatgctgtttaatcagcttcttgatatgccacacctgtcaggtggatagattatcttggctaTGATacgagagaaataagctttttgtgcatatggaacatttctgggatcttttctttcagcttatgaaacatgggaccaatattttacatgttgcatttctatttttgttctgtgtagatGTTCTCCAGTGAATGTAAGGGGTTATGATCACTTTCATAGTCCACTACCTCCCTGGTGAGTACTTAGAAATAACACATTCAAATAGTTGTTTTTTGTGCTATTATCAATTACCAATACACGTTACCAATTGTACTGAATTCTTTAAAATAAGTACCAAGAAGTGCAGCTTGTCACCATGTAGTTTCTGAGTAAATACCAGCTGAAACAGGATTGTAAAGTCACCCATCCAGACTTCAGAATGACACCCATTAATCTGGCCAGAGGCGAGACTGGTTAGGATGCCTTATCTTGTCATTTTTATGGCCACCCTAGCCTTTGTTTTATCAAGTTGTGTACCGTTACTGTCTTTAGTGTTGTCCTACCACTCGTGTAACCAAATTTTAATTTCATATTCCACGTGATTGTAAATAGCACTCATCTGTGTATAGTCAGAGAAATTCTGTATTAAAATTGACTTTCTAATTTGTCTGATTTTTCTCTG

Function

NR:

description
adrenodoxin, mitochondrial-like isoform X2

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0009055 electron transfer activity molecular_function
GO:0051537 2 iron, 2 sulfur cluster binding molecular_function

KEGG:

id description
K22070 FDX1, ADX; ferredoxin-1, mitochondrial

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951986.1 False 2408 mRNA 0.41 4 15843210 15847259
XM_036951987.1 True 1998 mRNA 0.41 4 15843210 15848190

Neighbor

gene id symbol gene type direction distance location
LOC110495638 LOC106575588 coding downstream 132842 15705622 ~ 15710368 (-)
LOC110495443 LOC106574666 coding downstream 238501 15601688 ~ 15604709 (-)
LOC110495447 LOC106575526 coding downstream 242335 15595085 ~ 15600875 (-)
LOC110495442 LOC106574707 coding downstream 342423 15434412 ~ 15500787 (-)
LOC110495436 LOC106574694 coding downstream 436663 15345980 ~ 15406547 (-)
LOC110497059 donson coding upstream 21544 15869734 ~ 15873958 (-)
LOC110495653 LOC106574394 coding upstream 29313 15877503 ~ 15928773 (-)
LOC110497061 LOC106574727 coding upstream 148776 15996966 ~ 16015860 (-)
LOC110495656 NA coding upstream 174376 16022467 ~ 16024382 (-)
LOC110495663 NA coding upstream 269911 16118101 ~ 16126127 (-)
G1521485 NA non-coding downstream 16841 15825848 ~ 15826369 (-)
G1521387 NA non-coding downstream 27253 15685901 ~ 15815957 (-)
G1521354 NA non-coding downstream 168285 15671321 ~ 15674925 (-)
G1521355 NA non-coding downstream 171973 15632723 ~ 15671237 (-)
G1521339 NA non-coding downstream 243797 15598874 ~ 15599413 (-)
G1521452 NA non-coding upstream 490 15848680 ~ 15849851 (-)
G1521498 NA non-coding upstream 18505 15866695 ~ 15867023 (-)
G1521503 NA non-coding upstream 27963 15876153 ~ 15876784 (-)
G1521514 NA non-coding upstream 63929 15912119 ~ 15912445 (-)
G1521515 NA non-coding upstream 64518 15912708 ~ 15913081 (-)
G1521308 NA other downstream 294727 15547876 ~ 15548483 (-)
G1520339 NA other downstream 566189 15276063 ~ 15277021 (-)
G1521563 LOC106575575 other upstream 146774 15994964 ~ 15995317 (-)
G1521546 LOC100380633 other upstream 206938 16055128 ~ 16084966 (-)
G1521712 NA other upstream 570060 16418250 ~ 16418918 (-)

Expression


Co-expression Network