LOC110497059 (donson)


Basic Information

Item Value
gene id LOC110497059
gene name donson
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 15869734 ~ 15873958 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951988.1
GCGCTAAATTTGTTTTGTGTTGAAGTATATTCAAGGAAAAACAACACAGAGGGGTATCGGACGCACACAATTAATTTAAACGCCTTTCTTCTTGTTGTTTTCGGACTAAACTTGTTTTACATTATCCTTACAAAATGTCACAACAAGCTGGTTACTCACCTAGTTTCAAAAGACCAGCTGAAATCCTGCGAATGCGGAGGAAGAGAGCAAGGAGCGAGGGTGTCAGTTCTGGCGGCCGAGGCGCGATTTCCAACCCGTGTGAGGGTGCCTCTATATCCGCCGTTCGACCATTCTCCCCAGGACCCCTGTTCGGCCAGGGTCGCTCTGGAGGGGGAGTGAAGCGGAGAAACCCATTTGCTAGCATCGAGAACACCTTCAGCAGCCCAGCGAAGAAGAAAGTCTTTATTTACACTGATGACGACGCCGACTCGTCGGATTCTGTGAAACCGGGCGGCTCTgcaggagtggagggagagaagtcaCCAACAAGAACACTGCCATTTAGTGAACGACTTCTCCAGGCAGAAGAACTAAGCAAAGACGTGCCTAGCAAGAAACCAACTTCTCTGTCTGAAGACGACTCACTGTTTGAAGATGAGGATTTGTTCCAGGAGGAGAGAACACCCATACTGAAGAGTCCCCAGGCTGGTGCAGTAACCTCCATAGCACCCCCTGCGTGTGTGGAGTACCCTGCAGACTGGAGCCTGAAGACGCGTCTCCTTTTCACCTCCCTGCTCCCCTTCTCCTGGGCTGTACAGCCCAGAGCTACAGAGGAGGCCCAGGGTCTTACCCAGCACTGTAGAGGACAGTACACCACTATACCACAGAGTATACAGGACCCTCGGACATCTGCTGAGCTACGATGTGGGTTCCAGCAGTGTCTGCAGTTCTGGCAGCACCCGTCCCTGTCCTGGCTCTCTCTGTTCCCCCGGATAGGAGCAGAGAGAAGCTTCACTGGCAAGAACGTCCCCTGGGCCCAGGACATGGCACTTCAACAGAGCCTCATGAGTGAATGGTCAGTGAGCCTGTCTTCCCTGTACAGTCTATTGAAGGCCAGACTATGTCCATATTTCTATGTGTGTTCCTACCAGTTCACTGCTCTTTTCAGAGCCTCAGGACTGGCGGGGAACAGCAACATCACTGCACTACTCACCCCAACCACCAGGGGGCTCAGGGAGGCCATGAAGGCTGATGGTATTGAGTTCACACTCCCCCtgctggaagagaggaggaagagcaaGGAGCAGGGATCAACCGCACACAAccaggagacagatggagaggaggaggagacacagtCTGAAGCCAGTGACAAGGAAgacgatgatgatgacgatggtgGGTTTTCCTGGCTGACGGAGATGGGAGTGCAGGATAAGATTAAGAAACCAGACAACATCTCCATCAAACTGCACAAAGAGCGCAACTCGGTGTGTTTAGACCACAAACCAGAGTCTGTAGTCTGTGTGTCAGGAACGCACACCTTCACTCTCATCAACTTCCTCATCAACTGTAAGAGCCTGGTGGCAGGGGCTGGATCACAGGCAGGCCTGCCCCCCACCCTACTGGCCCCTACAGCCTTCAGAGGAGCTACGCTACACTCACTCAAGGCGCGTAGTGTGAACGTGAAGACCCAGGTGCGTGCTGGGTACCAGGATGTGTGCAGTCTAGAGGTGACGGGACCCATAATGCCTCATTCTCTCCACGCCCTGACCCGCCTGCTTCGGCCTGCTCAGAGAGGAGGCTTCAGCactgcactctacacacacgaaCCCACTGCtgtcctcaacacacacaccaccaccagggaacaggctgAGCAAGCTGTAGAGCTGGATGGATGTGGTCTTCATTCCAGCACCATCCAGCAGCTCCAGGAGCCCTCTACCTTGGGGAAGTCTCCCCTCAGACAGCTCCATTTGAACAACTACTCCTACACATGGAAGTCCTGAGAGGAACTCACCCTGCCTCTATCAGAATGCCCAGAGAGCACTGCTAGGctacgtcccaaattgcacccttttctctttatagtgaaatgcttttgaccggagcccaataaagtagagcactatattggaaatagggtgccatttgggacacagcctagaTGCCTTTAGTGGACCGTACCATTCCTACACTGCTGTATACTTACTGTCAATATCTGTCTGAATAGCCTGTCAAAAACTCCTGGTATTCTGGCAATTGAAGTTTTACTAACTCCCTGTCCCCTGGACTTACAACCCAATGACATATGGGAAATGAAGTTTTTGTACATGTACAATTCCTGGATTTGCCATAATGAGTTGGATTTGGCTAAAGACTTGCTGATGATTTTAGACCCTGCCCTAAGATGTTTTTGTTTTGAACCATTTTTTTTATTCCTGTTTTAAGAGCTTCTATTTCAACATAATTGTTTTATATTAATGACGTTATATCTCTGTACTGGTGACATTTTATTGGATTAAATTAATTTGTCACATGA
>TU1741988
CAGGACCCTCGGACATCTGCTGAGCTACGATGTGGGTTCCAGCAGTGTCTGCAGTTCTGGCAGCACCCGTCCCTGTCCTGGCTCTCTCTGTTCCCCCGGATAGGAGCAGAGAGAAGCTTCACTGGCAAGAACGTCCCCTGGGCCCAGGACATGGCACTTCAACAGAGCCTCATGAGTGAATGAGCCTCAGGACTGGCGGGGAACAGCAACATCACTGCACTACTCACCCCAACCACCAGGGGGCTCAGGGAGGCCATGAAGGCTGATGGTATTGAGTTCACACTCCCCCtgctggaagagaggaggaagagcaaGGAGCAGGGATCAACCGCACACAAccaggagacagatggagaggaggaggagacacagtCTGAAGCCAGTGACAAGGAAgacgatgatgatgacgatggtgGGTTTTCCTGGCTGACGGAGATGGGAGTGCAGGATAAGATTAAGAAACCAGACAACATCTCCATCAAACTGCACAAAGAGCGCAACTCGGTGTGTTTAGACCACAAACCAGAGTCTGTAGTCTGTGTGTCAGGAACGCACACCTTCACTCTCATCAACTTCCTCATCAACTGTAAGAGCCTGGTGGCAGGGGCTGGATCACAGGCAGGCCTGCCCCCCACCCTACTGGCCCCTACAGCCTTCAGAGGAGCTACGCTACACTCACTCAAGGCGCGTAGTGTGAACGTGAAGACCCAGGTGCGTGCTGGGTACCAGGATGTGTGCAGTCTAGAGGTGACGGGACCCATAATGCCTCATTCTCTCCACGCCCTGACCCGCCTGCTTCGGCCTGCTCAGAGAGGAGGCTTCAGCac

Function

symbol description
donson Involved in mitotic G2 DNA damage checkpoint signaling and replication fork protection. Located in nucleus and replication fork. Part of replisome.

NR:

description
protein downstream neighbor of son homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951988.1 False 2485 mRNA 0.50 8 15869734 15873958
TU1741988 True 827 TUCP 0.57 4 15870976 15872466

Neighbor

gene id symbol gene type direction distance location
LOC110495652 LOC106575579 coding downstream 21544 15843210 ~ 15848190 (-)
LOC110495638 LOC106575588 coding downstream 159366 15705622 ~ 15710368 (-)
LOC110495443 LOC106574666 coding downstream 265025 15601688 ~ 15604709 (-)
LOC110495447 LOC106575526 coding downstream 268859 15595085 ~ 15600875 (-)
LOC110495442 LOC106574707 coding downstream 368947 15434412 ~ 15500787 (-)
LOC110495653 LOC106574394 coding upstream 3545 15877503 ~ 15928773 (-)
LOC110497061 LOC106574727 coding upstream 123008 15996966 ~ 16015860 (-)
LOC110495656 NA coding upstream 148608 16022467 ~ 16024382 (-)
LOC110495663 NA coding upstream 244143 16118101 ~ 16126127 (-)
LOC110495662 LOC106575549 coding upstream 261118 16135076 ~ 16164464 (-)
G1521498 NA non-coding downstream 2711 15866695 ~ 15867023 (-)
G1521488 NA non-coding downstream 3069 15828151 ~ 15866665 (-)
G1521452 NA non-coding downstream 19883 15848680 ~ 15849851 (-)
G1521485 NA non-coding downstream 43365 15825848 ~ 15826369 (-)
G1521387 NA non-coding downstream 53777 15685901 ~ 15815957 (-)
G1521503 NA non-coding upstream 2195 15876153 ~ 15876784 (-)
G1521514 NA non-coding upstream 38161 15912119 ~ 15912445 (-)
G1521515 NA non-coding upstream 38750 15912708 ~ 15913081 (-)
G1521517 NA non-coding upstream 43533 15917491 ~ 15919191 (-)
G1521523 NA non-coding upstream 67934 15941892 ~ 15942105 (-)
G1521308 NA other downstream 321251 15547876 ~ 15548483 (-)
G1520339 NA other downstream 592713 15276063 ~ 15277021 (-)
G1521563 LOC106575575 other upstream 121006 15994964 ~ 15995317 (-)
G1521546 LOC100380633 other upstream 181170 16055128 ~ 16084966 (-)
G1521712 NA other upstream 544292 16418250 ~ 16418918 (-)
LOC110495686 LOC106574627 other upstream 1063694 16915423 ~ 16946521 (-)

Expression


Co-expression Network