LOC110495664


Basic Information

Item Value
gene id LOC110495664
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 16169245 ~ 16171657 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037387.1
GTCATGTCTGCTAGGCAGGCAGGCTAAAGACAGCCAGAGTGAGTCAACATACTACACGACTGTCTTGTCTGTAGCTACAAAAAAACTAGCAAAAAGGCTCAAACTTTAGAGCGTCTCTTTGACGGAAGCGATACTCTGCGCAGTTTCATCAAGTAGGTTATTATGTTGCACAGGCTGTTGTCTGAGTGGCGCAAAACTCTTATTTTTAAGACGCAATCATGTTTATCACAAGTTACTGGTATGTTATGTGTGCTGATTACAAACCAgcatttcacaataaaacataatgTTACGACACTGCTAATAAATAATAAGACATTCGCACAAGTAGGCTGCGTTTTCGTACACCATAACTGTAATATGTGATTGCAGAAGACCTATTTGCAGGTCCATAACATTATGGTACattttagctgtgtgtgtgggtgggtggcttTAGCATAATAAATAGGGAGTttccagggttgggtaggttacatGTAGTCAGTTACTCCCCAACTCTTGGGGTTTCCACTTCTGCCTCCCAATGATGACGTTATAGGCCTATTGTATTGGCAAGGAGAGAGATTTTAACAGCTGAAATTGTATCTCGTAACCCTCACTTCTCCCCTTTATTTTGGCATCATTTTATTTTAAGGGCTTTACATAAATCACACTTAACATAATTCCCACATAGGGATTAAATGACACATTTAAAAGTGCATGTAAACTGAGTAACTGTTATTGTGAATGCATCACGTTCAATGTCAATAGGGTTATGTTGATCCATTTAGAATGTTAACCTCTAACCTGGACACTAGTTCACTTTCACCTGTATGATGTCTGGTTTTTCAAATGAACAGCTACAGAAAAGTGGGAGAGTTTCTTGTGTTGATGCCGGACAAGTCCACTATACCTGACTCCATCACATGCATCCTATGGAAGCATGGCTTGAACAAGACAGCAGAGTTTGACAAGGATTTTGGGCTGTACACCTATGGTGGCTTCGAACGTGGCACAACCATGGACCAGGCTACTGGAGAGCTGAGAATCACCAGTTTGATGAAAACAGACAATGGCGTTTGTTCTGTGGAGTTTAACAGCATACTGCTTGACCAGACATATACACTGTCTGTTTTCAGtaagcgtgtgtgtatgtgtgtacgACACAGTATCACAACCTGAAGTCACCTGTGAATGGAACAGTACCATGGCAACACTTTGCTGCAGTGCTGAGTGTCCGCTGGTGGTGTACCGTTGGTCTTGGCCTGAGCACCAGGGGGAGATGTGGAGCCAGCTGGTGCTGTGATTGGTGTCTTGGCTTCTGATCTATTGgctgttcatccatgtttctcatcTGCTGGAAGTGTTCCGAAGTAACCAAGGCAAAGTGAATGGAGATTCTGAGAGAAGTGACCCCCAGGTGATACTCTCCAACCCAGCTCCAACATCCCTGGTTCTCTAGTTATGATACGCaaagtttttatttaacctttattcaaccaggcaagtcagataagaataaattcttatttacaa
>XR_005037388.1
GTCATGTCTGCTAGGCAGGCAGGCTAAAGACAGCCAGAGTGAGTCAACATACTACACGACTGTCTTGTCTGTAGCTACAAAAAAACTAGCAAAAAGGCTCAAACTTTAGAGCGTCTCTTTGACGGAAGCGATACTCTGCGCAGTTTCATCAAGTAGGTTATTATGTTGCACAGGCTGTTGTCTGAGTGGCGCAAAACTCTTATTTTTAAGACGCAATCATGTTTATCACAAGTTACTGGTATGTTATGTGTGCTGATTACAAACCAgcatttcacaataaaacataatgTTACGACACTGCTAATAAATAATAAGACATTCGCACAAGTAGGCTGCGTTTTCGTACACCATAACTGTAATATGTGATTGCAGAAGACCTATTTGCAGGTCCATAACATTATGGTACattttagctgtgtgtgtgggtgggtggcttTAGCATAATAAATAGGGAGTttccagggttgggtaggttacatGTAGTCAGTTACTCCCCAACTCTTGGGGTTTCCACTTCTGCCTCCCAATGATGACGTTATAGGCCTATTGTATTGGCAAGGAGAGAGATTTTAACAGCTGAAATTGTATCTCGTAACCCTCACTTCTCCCCTTTATTTTGGCATCATTTTATTTTAAGGGCTTTACATAAATCACACTTAACATAATTCCCACATAGGGATTAAATGACACATTTAAAAGTGCATGTAAACTGAGTAACTGTTATTGTGAATGCATCACGTTCAATGTCAATAGGGTTATGTTGATCCATTTAGAATGTTAACCTCTAACCTGGACACTAGTTCACTTTCACCTGTATGATGTCTGGTTTTTCAAATGAACAGCTACAGAAAAGTGGGAGAGTTTCTTGTGTTGATGCCGGACAAGTCCACTATACCTGACTCCATCACATGCATCCTATGGAAGCATGGCTTGAACAAGACAGCAGAGTTTGACAAGGATTTTGGGCTGTACACCTATGGTGGCTTCGAACGTGGCACAACCATGGACCAGGCTACTGGAGAGCTGAGAATCACCAGTTTGATGAAAACAGACAATGGCGTTTGTTCTGTGGAGTTTAACAGCATACTGCTTGACCAGACATATACACTGTCTGTTTTCAACACAGTATCACAACCTGAAGTCACCTGTGAATGGAACAGTACCATGGCAACACTTTGCTGCAGTGCTGAGTGTCCGCTGGTGGTGTACCGTTGGTCTTGGCCTGAGCACCAGGGGGAGATGTGGAGCCAGCTGGTGCTGTGATTGGTGTCTTGGCTTCTGATCTATTGgctgttcatccatgtttctcatcTGCTGGAAGTGTTCCGAAGTAACCAAGGCAAAGTGAATGGAGATTCTGAGAGAAGTGACCCCCAGGTGATACTCTCCAACCCAGCTCCAACATCCCTGGTTCTCTAGTTATGATACGCaaagtttttatttaacctttattcaaccaggcaagtcagataagaataaattcttatttacaa

Function

NR:

description
SLAM family member 7 precursor

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037387.1 False 1518 mRNA 0.42 4 16169245 16171657
XR_005037388.1 True 1493 mRNA 0.42 4 16169245 16171657

Neighbor

gene id symbol gene type direction distance location
LOC110495662 LOC106575549 coding downstream 4781 16135076 ~ 16164464 (-)
LOC110495663 NA coding downstream 43118 16118101 ~ 16126127 (-)
LOC110495656 NA coding downstream 144867 16022467 ~ 16024382 (-)
LOC110497061 LOC106574727 coding downstream 153385 15996966 ~ 16015860 (-)
LOC110495653 LOC106574394 coding downstream 240472 15877503 ~ 15928773 (-)
LOC110495661 NA coding upstream 9553 16181210 ~ 16210360 (-)
LOC118941105 NA coding upstream 49537 16221194 ~ 16224343 (-)
LOC118941103 NA coding upstream 56385 16228042 ~ 16236785 (-)
LOC118941104 LOC106575549 coding upstream 73403 16245060 ~ 16258999 (-)
LOC110495665 NA coding upstream 91068 16262725 ~ 16267362 (-)
G1521550 NA non-coding downstream 78943 16088233 ~ 16090302 (-)
G1521584 LOC106575572 non-coding downstream 114225 16054745 ~ 16055020 (-)
G1521583 NA non-coding downstream 114834 16054019 ~ 16054411 (-)
G1521582 NA non-coding downstream 117004 16046943 ~ 16052241 (-)
G1521575 NA non-coding downstream 131805 16037073 ~ 16037440 (-)
G1521683 NA non-coding upstream 163238 16334895 ~ 16335197 (-)
G1521692 NA non-coding upstream 173395 16345052 ~ 16345240 (-)
G1521691 NA non-coding upstream 174441 16346098 ~ 16346458 (-)
G1521695 NA non-coding upstream 182557 16354214 ~ 16354733 (-)
G1521546 LOC100380633 other downstream 84279 16055128 ~ 16084966 (-)
G1521563 LOC106575575 other downstream 173928 15994964 ~ 15995317 (-)
LOC110497059 donson other downstream 296779 15869734 ~ 15873958 (-)
G1521387 NA other downstream 410011 15685901 ~ 15815957 (-)
G1521712 NA other upstream 246593 16418250 ~ 16418918 (-)
LOC110495686 LOC106574627 other upstream 765995 16915423 ~ 16946521 (-)
LOC118941063 LOC106574632 other upstream 837725 17009382 ~ 17011759 (-)
G1522794 NA other upstream 1270002 17441659 ~ 17450178 (-)
LOC110528763 LOC106575486 other upstream 1470761 17640874 ~ 17671930 (-)

Expression


Co-expression Network