LOC118941105


Basic Information

Item Value
gene id LOC118941105
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 16221194 ~ 16224343 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037389.1
ttagattactcgttggttattactgcattgtcggaactagaagcacaagcatttcgctacactcgcattaacatctgctaaccatgtgtatgtgacaaataaatttgatttgatttgacaaccaGGTGAAAGGAGTTCAAGTCCAAGGGAGGGGCGataacctgcagacactcggccctccatggaatgagtttgacacgtgattTAGAGGGTTACTAGAAATAATCTAATTAGCAGCTGAAGCCAGTGGGTCAAACAGTCCTAAAGATGAGCCCAAGCCTGAGATGCCACTCCATTGAAGTAGAAAGACCACCAGTAAAGAATCCAGTATTTTAGGATGGTAAGTAAGAGTCTGAGAAAGACACCAACCACAACATTTATTAAGAAGCATTAGGAAGTGCTCACATTATTACGTTGTTATTATGTTAGTGATTATCAACATGtggtattattattttaatttggATGCAATGAAAGACAAACAATGAACAAGTCTGATTGGTGCTGGTATTCTTAAAGGAAAGGAGGAACACCTGTTGTTGCATTTATAACATAAGACCAAGAGTTTTTCCAGACCATGTGACCTGGCCACGAAAACAATGATTACattaagcttgtgactctacaagcttgttggatgcatttgctgtttgttttggttgtgtctcagattattttgtgcccaatagaaattaatgataAATAATGCATTGTTACTTTTATTCTGCCCTTGAGTTGCGTTCccatgcaaaactagacagatagctaacaactaagtcttcaataaaactcccaaGGCGTGACTTTTCTTGAATGAATATATTGAAAACTTTTGTTAAAAAACACATATTTTCCCAGGCTGAAGCGTGACAAGAAATAACTACACTGAAAGACCTGCATCGTAGTGTTGTTTTTAGCTGCTTCTATGCGTGCAGAACGaattctctacttcctgtttgcGTACAGTCTAAGTACCAGAAAGCTCCACCATGGAACACAATGAAAATCCATTTTAaccattgtaataaaataatctgttacctcctaacaggatggcagcacaacttttattctaaataagaatataatgttTCTAGACACGTTTACCTGActatggatgctaccatgattactgataatcctgaatgaatcgtgaataatgatgagtgattAAGTTAGACAGTCTGCGCTTTAACCTCATATTCATTGTATgatttaaaatccaaagtgctggagtacagagtcaaaacaaccaaaaaagtgtcactGTCTCAAtgcttttggagctcactgtataatGTGATGAGCTGTGTGCTTTATGAATTTATAGTACTTCAGAAATGAGGGCAATATTTGTATCTCAGAACAATTTGATGGAAAAAAACAAGAGATTATCTTCTACTTTGAGGTAAATAGCTTTGTGGATTCTTACCCTTTCTCAGTATTCATGTCTCATCTTTTAAAATCTCAATCAATTTGTGATGGTTGTTTTTGTTTGAAGCCGTAGTATCAATCACTTTGTGGTTAAATGATTCCTTTTCAGGTATTTTCTCCAGAGCGCTTTATGCCAACCCAATGCACTTTCTGTTTTAAGTCACAGCTGAATATATGTCTTATATCATTTCACTTGACCTATGTCAAGGAATTTGTACAGGTTATTGTTTTATTACCCAGGTAGATGAGGTAGAGCTCATCTACCTTGTAAAGAGAGAGCTATTCAGCACTGAGATGTTTTATTGCTGAGAGAGCTCTGCAGTACTGAGATGTGTTATTGCTGAGAGAGCTCTGCAGTACTGAGATGTTTAATTACTAATAACAATGGTGcatgtgtatttaaaaaaaaaaaagtttacgcATTAATATTTGATTTTGACAAAGTGTTTGTCTTCATCAAATTaccctcaggtgtgtgtgtaatatatatatatatatatataataaaaaaaatctgttttcacaATAGAATTTTGTCACCTGAATTTTAGgacatttttttctctcatatATCTACATCAGTCTGTGATGGACCATAGTAAGGGGTAACACTTTTTGCCACCAGATTGGTAAGAACATTTGTTGGGGAAGACCACTAACCTGGTATATCCCAGGTTTTAGTTCTGTTACTGGTATGTCTCATGTAATTATGTTAAAGAAGATGTTATGAATTGAGACAAGCTCACATTAATTTATTCTGGGACTGGACCAAGACTGTTCTAAAATGGAGTCCTGGCACATGCAAAAACTTGTAGTGATGTGTTGATAACTGAATGCTTGTTGTCCATGTAAACATCTGAACACCAATTCTGTTTCAGCACTTTGTCTTAAGAATACATTTCTTCCAAACTTGATTGGTGAAAGCAATACAGAGGAAGGTCCATATAGGGCTGGGTTCAGACATCACCAACATACATATCCCTATCTGAACCCTTCAGATTTATGAATACTGAGATGGGGAAAGGGACTAGTTGACACTAGACTTAGATCAGTACTGGAttacttatttatttttcaaattgaacctttttaactaggcaagtcagttaagaacaaattcttatttacaatgatggcctaggaacagtgagttaactgccttgttccggtgcagaacaacagatttttcccTTGTATGCtcggatttgatctagcaacctttcagttactggcacaacgctctaaccactaggctacttctCAGCCAGGTTCGCTTAACGGATCACACCACAGGACTGACACATTCTAAATCAAGTGTCAACTCCTTCCTTGTGAGACATGCTGCTGTGAAAAACAAATGCACTTGAAAGAGCAGtgtgtttaaatatattttatctgCAATGGTTGAATTCCAGCCTGCATATGCAAACAATTCTTTTGTTAATTTGAGGTGTTtgatatttatattttttcaatAAAAGACTTGAGTTCTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037389.1 True 2927 mRNA 0.36 2 16221194 16224343

Neighbor

gene id symbol gene type direction distance location
LOC110495661 NA coding downstream 10834 16181210 ~ 16210360 (-)
LOC110495664 NA coding downstream 49537 16169245 ~ 16171657 (-)
LOC110495662 LOC106575549 coding downstream 56730 16135076 ~ 16164464 (-)
LOC110495663 NA coding downstream 95067 16118101 ~ 16126127 (-)
LOC110495656 NA coding downstream 196816 16022467 ~ 16024382 (-)
LOC118941103 NA coding upstream 3699 16228042 ~ 16236785 (-)
LOC118941104 LOC106575549 coding upstream 20717 16245060 ~ 16258999 (-)
LOC110495665 NA coding upstream 38382 16262725 ~ 16267362 (-)
LOC110497063 LOC106575501 coding upstream 123193 16347536 ~ 16352967 (-)
LOC110495669 LOC106575500 coding upstream 144204 16368547 ~ 16383321 (-)
G1521550 NA non-coding downstream 130892 16088233 ~ 16090302 (-)
G1521584 LOC106575572 non-coding downstream 166174 16054745 ~ 16055020 (-)
G1521583 NA non-coding downstream 166783 16054019 ~ 16054411 (-)
G1521582 NA non-coding downstream 168953 16046943 ~ 16052241 (-)
G1521575 NA non-coding downstream 183754 16037073 ~ 16037440 (-)
G1521683 NA non-coding upstream 110552 16334895 ~ 16335197 (-)
G1521692 NA non-coding upstream 120709 16345052 ~ 16345240 (-)
G1521691 NA non-coding upstream 121755 16346098 ~ 16346458 (-)
G1521695 NA non-coding upstream 129871 16354214 ~ 16354733 (-)
G1521546 LOC100380633 other downstream 136228 16055128 ~ 16084966 (-)
G1521563 LOC106575575 other downstream 225877 15994964 ~ 15995317 (-)
LOC110497059 donson other downstream 348728 15869734 ~ 15873958 (-)
G1521387 NA other downstream 461960 15685901 ~ 15815957 (-)
G1521712 NA other upstream 193907 16418250 ~ 16418918 (-)
LOC110495686 LOC106574627 other upstream 713309 16915423 ~ 16946521 (-)
LOC118941063 LOC106574632 other upstream 785039 17009382 ~ 17011759 (-)
G1522794 NA other upstream 1217316 17441659 ~ 17450178 (-)
LOC110528763 LOC106575486 other upstream 1418075 17640874 ~ 17671930 (-)

Expression


Co-expression Network