LOC118941103


Basic Information

Item Value
gene id LOC118941103
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 16228042 ~ 16236785 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036952008.1
TTTTGGGATGCCAACCGCAATCTCAGCGAAGAAGAAGGCTATGACCCGCACAGTTTTTTTTAGCACATCTAATTTTAATTTACTTTTATTTAATATGTAAACAAACTAACTAGAAAATATGCCCAAACTTACGTTCATTGGATTGTGCTTCTGCTTTCGTCTGGCGCAAAAGGTGGTTTCCGGAGATTATCTTTATCATGAAGTGGGAGGTGAGCTCGTGTTGAAACCAGATAAGTCCACAGTGCCTGACCCCATCACAAGCATCCTATGGAAGCATGGGAAGAACAAGGTGGCAGAGTGGGACAAGGATTTTGGTGGTCTGGATATCTATGGTGCCTTCAAAAACCACACAACCCTGGACAATACTACTGGAGAGCTGAGAATCAGTGGATTGAAGAAAACAGACAGTGGAGTTTATTCTGTGGAGTTCAACAGCAAACTGCTTGACCAGACATATACACTGTCTGTTATCAAGGCAGTCCCCAAACCCACCATCACTTCTTCCTGTAACCCAGACAAAACctcctgcactctgacctgtgaGGGCGACACCACTGATGCTGAACCAGTCACCTACAgctggaaagagggagagggggcgtGGGAGGTCATAGGAAAACAGCTGGTTGTCTCTAAGAACTACACTGGTAAATCAACCAACAGTTACAAGTACTTCTGCAAGATGAAGAACTCCGTTAGTGGGGAAGTCAGTGAGGTGTTTGGTCCAGAGGCAGTTTCCAAACCCACAATCACTTATACCTGCAACTCCAACAAAACCTCCTGCATTCTAACCTGTGAAGGCGACGCCACTGGTGCTGAACCCGTCACCTACAGCTGGAAAGTGGGGGAGGGGGCGTGGGAGGTCATAGGAAAACAGCTGATTGTCTCTAAGAGCGACACTGGCAAATCAACCAACAGTTACAAGTACATCTGCAAGCTGAAGAACTCTGTTAGTGGGGAAGTCAGTGAGCCAGTTGGAGAGGTGTTTGGTCCAGAGCCTTCTGAAATTGGTGGTggggttgttgttggtgttgtcgTTACCATTGTAGCGCTTGTTGCCGTCATAACAGTTTGGTTGGTGTGGAAGAAAATGAAAGctAAAGGCAGTGAAGGAGTCCAGACAGAATGAGAGATTATGGTTCCGCTGATGGTCAACCACAAAGCAGGGGAAGAGGACGCAGACAAGCCTGGAAAGGGGCAGGAGAATGGAGGCGTGTATGAAACTTAAGCGGATAGTTTACCCGACAGTTACAGTGAACTCCAACCATATTTGTCTTGATGATTTGATTCCTGTAACTGACTGATTCTTAAATGCTAAACGTCAATGGTCACAGACCATtggctacagctcagcgttcaacacaataTTGCCcacaaagcttatcactaagttaaggacgctgggactaaacacctccctctgcaactggacttcctgatgggccgcccccccaggtggtaaga
>XM_036952010.1
TTTTGGGATGCCAACCGCAATCTCAGCGAAGAAGAAGGCTATGACCCGCACAGTTTTTTTTAGCACATCTAATTTTAATTTACTTTTATTTAATATGTAAACAAACTAACTAGAAAATATGCCCAAACTTACGTTCATTGGATTGTGCTTCTGCTTTCGTCTGGCGCAAAAGGTGGTTTCCGGAGATTATCTTTATCATGAAGTGGGAGGTGAGCTCGTGTTGAAACCAGATAAGTCCACAGTGCCTGACCCCATCACAAGCATCCTATGGAAGCATGGGAAGAACAAGGTGGCAGAGTGGGACAAGGATTTTGGTGGTCTGGATATCTATGGTGCCTTCAAAAACCACACAACCCTGGACAATACTACTGGAGAGCTGAGAATCAGTGGATTGAAGAAAACAGACAGTGGAGTTTATTCTGTGGAGTTCAACAGCAAACTGCTTGACCAGACATATACACTGTCTGTTATCAAGGCAGTCCCCAAACCCACCATCACTTCTTCCTGTAACCCAGACAAAACctcctgcactctgacctgtgaGGGCGACACCACTGATGCTGAACCAGTCACCTACAgctggaaagagggagagggggcgtGGGAGGTCATAGGAAAACAGCTGGTTGTCTCTAAGAACTACACTGAGGCAGTTTCCAAACCCACAATCACTTATACCTGCAACTCCAACAAAACCTCCTGCATTCTAACCTGTGAAGGCGACGCCACTGGTGCTGAACCCGTCACCTACAGCTGGAAAGTGGGGGAGGGGGCGTGGGAGGTCATAGGAAAACAGCTGATTGTCTCTAAGAGCGACACTGGCAAATCAACCAACAGTTACAAGTACATCTGCAAGCTGAAGAACTCTGTTAGTGGGGAAGTCAGTGAGCCAGTTGGAGAGGTGTTTGGTCCAGAGCCTTCTGAAATTGGTGGTggggttgttgttggtgttgtcgTTACCATTGTAGCGCTTGTTGCCGTCATAACAGTTTGGTTGGTGTGGAAGAAAATGAAAGctAAAGGCAGTGAAGGAGTCCAGACAGAATGAGAGATTATGGTTCCGCTGATGGTCAACCACAAAGCAGGGGAAGAGGACGCAGACAAGCCTGGAAAGGGGCAGGAGAATGGAGGCGTGTATGAAACTTAAGCGGATAGTTTACCCGACAGTTACAGTGAACTCCAACCATATTTGTCTTGATGATTTGATTCCTGTAACTGACTGATTCTTAAATGCTAAACGTCAATGGTCACAGACCATtggctacagctcagcgttcaacacaataTTGCCcacaaagcttatcactaagttaaggacgctgggactaaacacctccctctgcaactggacttcctgatgggccgcccccccaggtggtaaga
>TU1742058
GTCCACAGTGCCTGACCCCATCACAAGCATCCTATGGAAGCATGGGAAGAACAAGGTGGCAGAGTGGGACAAGGATTTTGGTGGTCTGGATATCTATGGTGCCTTCAAAAACCACACAACCCTGGACAATACTACTGGAGAGCTGAGAATCAGTGGATTGAAGAAAACAGACAGTGGAGTTTATTCTGTGGAGTTCAACAGCAAACTGCTTGACCAGACATATACACTGTCTGTTATCAAGGCAGTCCCCAAACCCACCATCACTTCTTCCTGTAACCCAGACAAAACctcctgcactctgacctgtgaGGGCGACACCACTGATGCTGAACCAGTCACCTACAgctggaaagagggagagggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036952008.1 False 1464 mRNA 0.47 8 16228042 16236785
XM_036952010.1 False 1383 mRNA 0.47 8 16228042 16236785
TU1742058 True 364 lncRNA 0.49 2 16233401 16233899

Neighbor

gene id symbol gene type direction distance location
LOC118941105 NA coding downstream 3699 16221194 ~ 16224343 (-)
LOC110495661 NA coding downstream 17682 16181210 ~ 16210360 (-)
LOC110495664 NA coding downstream 56385 16169245 ~ 16171657 (-)
LOC110495662 LOC106575549 coding downstream 63578 16135076 ~ 16164464 (-)
LOC110495663 NA coding downstream 101915 16118101 ~ 16126127 (-)
LOC118941104 LOC106575549 coding upstream 8275 16245060 ~ 16258999 (-)
LOC110495665 NA coding upstream 25940 16262725 ~ 16267362 (-)
LOC110497063 LOC106575501 coding upstream 110751 16347536 ~ 16352967 (-)
LOC110495669 LOC106575500 coding upstream 131762 16368547 ~ 16383321 (-)
LOC110495671 LOC105019845 coding upstream 149261 16386046 ~ 16411509 (-)
G1521550 NA non-coding downstream 137740 16088233 ~ 16090302 (-)
G1521584 LOC106575572 non-coding downstream 173022 16054745 ~ 16055020 (-)
G1521583 NA non-coding downstream 173631 16054019 ~ 16054411 (-)
G1521582 NA non-coding downstream 175801 16046943 ~ 16052241 (-)
G1521575 NA non-coding downstream 190602 16037073 ~ 16037440 (-)
G1521683 NA non-coding upstream 98110 16334895 ~ 16335197 (-)
G1521692 NA non-coding upstream 108267 16345052 ~ 16345240 (-)
G1521691 NA non-coding upstream 109313 16346098 ~ 16346458 (-)
G1521695 NA non-coding upstream 117429 16354214 ~ 16354733 (-)
G1521711 NA non-coding upstream 176083 16412868 ~ 16413592 (-)
G1521546 LOC100380633 other downstream 143076 16055128 ~ 16084966 (-)
LOC110495656 NA other downstream 203660 16022467 ~ 16024382 (-)
G1521563 LOC106575575 other downstream 232725 15994964 ~ 15995317 (-)
LOC110497059 donson other downstream 355576 15869734 ~ 15873958 (-)
G1521387 NA other downstream 468808 15685901 ~ 15815957 (-)
G1521712 NA other upstream 181465 16418250 ~ 16418918 (-)
LOC110495686 LOC106574627 other upstream 700867 16915423 ~ 16946521 (-)
LOC118941063 LOC106574632 other upstream 772597 17009382 ~ 17011759 (-)
G1522794 NA other upstream 1204874 17441659 ~ 17450178 (-)
LOC110528763 LOC106575486 other upstream 1405633 17640874 ~ 17671930 (-)

Expression


Co-expression Network