LOC100135945 (LOC106575464)


Basic Information

Item Value
gene id LOC100135945
gene name LOC106575464
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 17920085 ~ 17938169 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951027.1
GTGAACAGTGGATACCAGCccagacactgtgtgtgtgttcactaatcACTATCACAGAGTTGAACCACCATGAAAACAGGGTGACAAACACAACCTAAGACAGGAGGTGAAGTGTGTTAGGCACCATGTGTAAATGGTAATGATGACATGAATGATGAACAGCCACCAGTAAGGTGTACAGATAGAGAGGTGCTCTGCTCCGGTGCGTCTTTCTGTCCAGTGCTGTGTGTATGTCGAGATGAGTGCGTGGACACAGCGTGATCCCAGCGATTGATGATTaccctggaagtgtgtgtgtgatcagttCGTTTTGTTGGAGCTGGTGTCGAGACTCTGAACCCGTCATGGAGTCGGGAAAGCAGCTGACCGGCACTCTAACCCTAGCAGTGTTTTCAGCAGTCTTGGGTTCTCTACAGTACGGATACAGCCTGGGAGTCATCAATGCGCCAcagaagGTGATAGAGCAGCATTATGGGCGGTCCCTGGGGGTGCTCCCTGAGGAGCCTCTCCTCCTATCAGAGAACGGTACAGGGACAGAGAAGCAGGAAGTGCATCCCTCTGTGGTCATGTATTGGTCTCTGTCTGTGTCGATCTTCTCCATCGGGGGCGTGGTGTCATCCTTCCTGGTGGGCTTTGTTGGAGACCTGAGAGGAAGGGTGAAGGGCATGTTGATGGTGAATGTGTTAGCAGTAATAGCAGGTCTACTGATGGTGATGGCTAAGATGTGGAAACCTCACGTCATGGTCATCGCTGGACGATGTGTCATGGGATTCTACTGTGgtcTGTCCTCAGGGTTAGTTCCTATGTATATAGGGGAGATAGCTCCCATGGCCTACAGAGGATCTCTAGGAACCTTACATCAGCTGGCTATTGTTAGTGGTATACTACTGAGTCAGGTGCTAGGTCTAGAGTTCCTCCTGGGTAATGACTACTACTGGCCGCTGCTGCTGGGTCTGTCTGGAGCTCCTGCTGTTTTACAGTCTCTACTGCTGCCACTGTGTCCTGAAAGTCCCAGATACCTCTACATCAAGAGAGGCATGGTGGAGGAGGCCAAAAATAgTCTGCGTCGTCTGAAGGGAGAGTATGACCCATCAGCTGAcctggaggagatgaggagggagaaggaggaggtggagaaggaggcgCAAGTCTCTATCGCTGTACTGGTGCGGTCGTCTCTCTACAGGCAGCAGCTGTTTGTAGCCCTGATGATGCATCTCTCACAACAACTGTcaggaatcaacgctATCTTTTATTACTCCACAGCCATCTTTGAGAGAGCAGGAGTCACTCAGCCTGTCTATGCAACCATTGGAGTAGGAGTTCTCAATACCGTCTTTACCATGGTGTCGgtgGCTCTAGTGGACAGGGCCGGCAGACGGACGTTGACTCTGATTGGTTTAGGTGGGATGTGTATCTGTGCCGTCGCCATGACAGTCGGCCTCGTGTACCTGaaAGTCTACTCCTGGATGTCCTATGTCAGTATGTCGGCCATCttcctgtttgtgtgtttctttGAGATCGGCCCTGGTCCCATCCCCTGGTTCATTGTGGCTGAGTTATTCAGTCAGGGCCCCAGGCCTGCTGCTATAGCTCTGGCTGGCTGCACCAACTGGACCAGCAACTTCATCATAGGCATGACCTTCCCTTACATAGAGgCTCTGTGTGGTAGCTATGTATTCATCCTGTTTGCTGTGCTGTTGTTTGGCTTCACTGTGTTCACTTATCTGCGCGTGCCGGAGACCAAAGGGAAGACATTTGAAGAGATAGCAGCTGTGTTTAAAAAGGGAATGAAACAGACACCAGGAACCAGAAAGACTGGAACTGAAACTGGtactggtacaggtacctccaccgaGCTGGAGCAGCTCAAATCAGACTCCCAGGCCTGACATGCTCACGAGTCCAGGGGGATCCAACCCTAGAGAGTTGCAGGGTGTGCAAGCTTTAGTTCAGGTACAACTCCTGACATGACTAACTTTACATAACATACACAGGGCCCAGAATGTTTCCTGCTCAGGATAAAGCAGACAGAAAAACTCCTGGCTCTACTGTATCATTCATGGTCAGTACAATAACGAGAAAGACAGCAGATGGTTTTGTTTCTAGAGGTTACATTATCCTGTTCTACcatgttccatgtgtaactgacTGAATGTATTCACTCAAGTTGAATGTCACCAAATGGGACTTTACAATTACTATTAATAAAATACTACCAAGATAGTG
>NM_001124289.1
agttCGTTTTGTTGGAGCTGGTGTCGAGACTCTGAACCCGTCATGGAGTCGGGAAAGCAGCTGACCGGCACTCTAACCCTAGCAGTGTTTTCAGCAGTCTTGGGTTCTCTACAGTACGGATACAGCCTGGGAGTCATCAATGCGCCAcagaagGTGATAGAGCAGCATTATGGGCGGTCCCTGGGGGTGCTCCCTGAGGAGCCTCTCCTCCTATCAGAGAACGGTACAGGGACAGAGAAGCAGGAAGTGCATCCCTCTGTGGTCATGTATTGGTCTCTGTCTGTGTCGATCTTCTCCATCGGGGGCGTGGTGTCATCCTTCCTGGTGGGCTTTGTTGGAGACCTGAGAGGAAGGGTGAAGGGCATGTTGATGGTGAATGTGTTAGCAGTAATAGCAGGTCTACTGATGGTGATGGCTAAGATGTGGAAACCTCACGTCATGGTCATCGCTGGACGATGTGTCATGGGATTCTACTGTGgtcTGTCCTCAGGGTTAGTTCCTATGTATATAGGGGAGATAGCTCCCATGGCCTACAGAGGATCTCTAGGAACCTTACATCAGCTGGCTATTGTTAGTGGTATACTACTGAGTCAGGTGCTAGGTCTAGAGTTCCTCCTGGGTAATGACTACTACTGGCCGCTGCTGCTGGGTCTGTCTGGAGCTCCTGCTGTTTTACAGTCTCTACTGCTGCCACTGTGTCCTGAAAGTCCCAGATACCTCTACATCAAGAGAGGCATGGTGGAGGAGGCCAAAAATAgTCTGCGTCGTCTGAAGGGAGAGTATGACCCATCAGCTGAcctggaggagatgaggagggagaaggaggaggtggagaaggaggcgCAAGTCTCTATCGCTGTACTGGTGCGGTCGTCTCTCTACAGGCAGCAGCTGTTTGTAGCCCTGATGATGCATCTCTCACAACAACTGTcaggaatcaacgctATCTTTTATTACTCCACAGCCATCTTTGAGAGAGCAGGAGTCACTCAGCCTGTCTATGCAACCATTGGAGTAGGAGTTCTCAATACCGTCTTTACCATGGTGTCGgtgGCTCTAGTGGACAGGGCCGGCAGACGGACGTTGACTCTGATTGGTTTAGGTGGGATGTGTATCTGTGCCGTCGCCATGACAGTCGGCCTCGTGTACCTGaaAGTCTACTCCTGGATGTCCTATGTCAGTATGTCGGCCATCttcctgtttgtgtgtttctttGAGATCGGCCCTGGTCCCATCCCCTGGTTCATTGTGGCTGAGTTATTCAGTCAGGGCCCCAGGCCTGCTGCTATAGCTCTGGCTGGCTGCACCAACTGGACCAGCAACTTCATCATAGGCATGACCTTCCCTTACATAGAGgCTCTGTGTGGTAGCTATGTATTCATCCTGTTTGCTGTGCTGTTGTTTGGCTTCACTGTGTTCACTTATCTGCGCGTGCCGGAGACCAAAGGGAAGACATTTGAAGAGATAGCAGCTGTGTTTAAAAGGGAATGAAACAGACACCAGGAACCAGAAAGACTGGAACTGAAACTGGtactggtacaggtacctccaccgaGCTGGAGCAGCTCAAATCAGACTCCCAGGCCTGACATGCTCACGAGTCCAGGGGGATCCAACCCTAGAGAGTTGCAGGGTGTGCAAGCTTTAGTTCAGGTACAACTCCTGACATGACTAACTTTACATAACATACACAGGGCCCAGAATGTTTCCTGCTCAGGATAAAGCAGACAGAAAAACTCCTGGCTCTACTGTATCATTCATGGTCAGTACAATAACGAGAAAGACAGCAGATGGTTTTGTTTCTAGAGGTTACATTATCCTGTTCTACcatgttccatgtgtaactgacTGAATGTATTCACTCAAGTTGAATGTCACCAAATGGGACTTTACAATTACTATTAATAAAATACTACCAAGATA
>XM_036951028.1
TGTGAACAGTGGATACCAGCccagacactgtgtgtgtgttcactaatcACTATCACAGAGTTGAACCACCATGAAAACAGGGTGACAAACACAACCTAAGACAGGAGGTGAAGTGTGTTAGGCACCATGTGTAAATGGTAATGATGACATGAATGATGAACAGCCACCAGTAAGGTGTACAGATAGAGAGGTGCTCTGCTCCGGTGCGTCTTTCTGTCCAGTGCTGTGTGTATGTCGAGATGAGTGCGTGGACACAGCGTGATCCCAGCGATTGATGATTaccctggaagtgtgtgtgtgatcagttCGTTTTGTTGGAGCTGGTGTCGAGACTCTGAACCCGTCATGGAGTCGGGAAAGCTGACCGGCACTCTAACCCTAGCAGTGTTTTCAGCAGTCTTGGGTTCTCTACAGTACGGATACAGCCTGGGAGTCATCAATGCGCCAcagaagGTGATAGAGCAGCATTATGGGCGGTCCCTGGGGGTGCTCCCTGAGGAGCCTCTCCTCCTATCAGAGAACGGTACAGGGACAGAGAAGCAGGAAGTGCATCCCTCTGTGGTCATGTATTGGTCTCTGTCTGTGTCGATCTTCTCCATCGGGGGCGTGGTGTCATCCTTCCTGGTGGGCTTTGTTGGAGACCTGAGAGGAAGGGTGAAGGGCATGTTGATGGTGAATGTGTTAGCAGTAATAGCAGGTCTACTGATGGTGATGGCTAAGATGTGGAAACCTCACGTCATGGTCATCGCTGGACGATGTGTCATGGGATTCTACTGTGgtcTGTCCTCAGGGTTAGTTCCTATGTATATAGGGGAGATAGCTCCCATGGCCTACAGAGGATCTCTAGGAACCTTACATCAGCTGGCTATTGTTAGTGGTATACTACTGAGTCAGGTGCTAGGTCTAGAGTTCCTCCTGGGTAATGACTACTACTGGCCGCTGCTGCTGGGTCTGTCTGGAGCTCCTGCTGTTTTACAGTCTCTACTGCTGCCACTGTGTCCTGAAAGTCCCAGATACCTCTACATCAAGAGAGGCATGGTGGAGGAGGCCAAAAATAgTCTGCGTCGTCTGAAGGGAGAGTATGACCCATCAGCTGAcctggaggagatgaggagggagaaggaggaggtggagaaggaggcgCAAGTCTCTATCGCTGTACTGGTGCGGTCGTCTCTCTACAGGCAGCAGCTGTTTGTAGCCCTGATGATGCATCTCTCACAACAACTGTcaggaatcaacgctATCTTTTATTACTCCACAGCCATCTTTGAGAGAGCAGGAGTCACTCAGCCTGTCTATGCAACCATTGGAGTAGGAGTTCTCAATACCGTCTTTACCATGGTGTCGgtgGCTCTAGTGGACAGGGCCGGCAGACGGACGTTGACTCTGATTGGTTTAGGTGGGATGTGTATCTGTGCCGTCGCCATGACAGTCGGCCTCGTGTACCTGaaAGTCTACTCCTGGATGTCCTATGTCAGTATGTCGGCCATCttcctgtttgtgtgtttctttGAGATCGGCCCTGGTCCCATCCCCTGGTTCATTGTGGCTGAGTTATTCAGTCAGGGCCCCAGGCCTGCTGCTATAGCTCTGGCTGGCTGCACCAACTGGACCAGCAACTTCATCATAGGCATGACCTTCCCTTACATAGAGgCTCTGTGTGGTAGCTATGTATTCATCCTGTTTGCTGTGCTGTTGTTTGGCTTCACTGTGTTCACTTATCTGCGCGTGCCGGAGACCAAAGGGAAGACATTTGAAGAGATAGCAGCTGTGTTTAAAAAGGGAATGAAACAGACACCAGGAACCAGAAAGACTGGAACTGAAACTGGtactggtacaggtacctccaccgaGCTGGAGCAGCTCAAATCAGACTCCCAGGCCTGACATGCTCACGAGTCCAGGGGGATCCAACCCTAGAGAGTTGCAGGGTGTGCAAGCTTTAGTTCAGGTACAACTCCTGACATGACTAACTTTACATAACATACACAGGGCCCAGAATGTTTCCTGCTCAGGATAAAGCAGACAGAAAAACTCCTGGCTCTACTGTATCATTCATGGTCAGTACAATAACGAGAAAGACAGCAGATGGTTTTGTTTCTAGAGGTTACATTATCCTGTTCTACcatgttccatgtgtaactgacTGAATGTATTCACTCAAGTTGAATGTCACCAAATGGGACTTTACAATTACTATTAATAAAA

Function

NR:

description
PREDICTED: solute carrier family 2, facilitated glucose transporter member 2-like isoform X2

GO: NA

KEGG:

id description
K07593 SLC2A2, GLUT2; MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951027.1 False 2229 mRNA 0.50 12 17920085 17938168
NM_001124289.1 False 1923 mRNA 0.50 13 17920088 17937866
XM_036951028.1 True 2211 mRNA 0.50 12 17920101 17938169

Neighbor

gene id symbol gene type direction distance location
LOC110527386 LOC106575479 coding downstream 58219 17842367 ~ 17861866 (-)
LOC110510546 LOC106575482 coding downstream 105082 17719504 ~ 17815003 (-)
LOC118941106 LOC106575483 coding downstream 217258 17685551 ~ 17702827 (-)
LOC110527371 LOC106575485 coding downstream 235491 17675207 ~ 17684594 (-)
LOC110528763 LOC106575486 coding downstream 248155 17640874 ~ 17671930 (-)
LOC110528772 LOC105019808 coding upstream 1768 17939937 ~ 18012067 (-)
trnal-cag-10 NA coding upstream 84302 18022401 ~ 18022696 (-)
trnal-cag-11 NA coding upstream 85157 18023326 ~ 18023408 (-)
trnal-cag-12 NA coding upstream 85729 18023898 ~ 18023980 (-)
trnal-cag-13 NA coding upstream 86583 18024752 ~ 18024834 (-)
G1522995 NA non-coding downstream 33330 17882977 ~ 17886755 (-)
G1522993 NA non-coding downstream 39644 17880017 ~ 17880441 (-)
G1522991 NA non-coding downstream 45261 17874608 ~ 17874824 (-)
G1522981 NA non-coding downstream 64853 17854923 ~ 17855232 (-)
G1522980 NA non-coding downstream 66316 17853567 ~ 17853769 (-)
G1523045 NA non-coding upstream 146355 18084524 ~ 18087754 (-)
G1523056 NA non-coding upstream 166450 18104619 ~ 18105012 (-)
G1523063 atr non-coding upstream 175302 18113471 ~ 18114182 (-)
G1523081 NA non-coding upstream 225045 18163214 ~ 18163965 (-)
G1522794 NA other downstream 469907 17441659 ~ 17450178 (-)
LOC118941063 LOC106574632 other downstream 908707 17009382 ~ 17011759 (-)
LOC118941107 NA other upstream 113811 18051980 ~ 18054354 (-)
G1523149 fndc3b other upstream 493924 18432093 ~ 18436052 (-)
ghs-r ghsr other upstream 507418 18445083 ~ 18447303 (-)
G1523234 NA other upstream 602976 18541145 ~ 18541711 (-)
G1523241 NA other upstream 623737 18561906 ~ 18567247 (-)

Expression


Co-expression Network