trnal-cag-14



Basic Information


Item Value
gene id trnal-cag-14
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 18025324 ~ 18025406 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnal-cag-14
gtcaggatggccgagcggtctaaggcgctgcgttcaggtcgcagtctcccctggaggcgtgggttcgaatcccacttctgaca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnal-cag-14 True 83 mRNA 0.60 1 18025324 18025406

Neighbor


gene id symbol gene type direction distance location
trnal-cag-13 NA coding downstream 490 18024752 ~ 18024834 (-)
trnal-cag-12 NA coding downstream 1344 18023898 ~ 18023980 (-)
trnal-cag-11 NA coding downstream 1916 18023326 ~ 18023408 (-)
trnal-cag-10 NA coding downstream 2771 18022401 ~ 18022696 (-)
LOC110528772 LOC105019808 coding downstream 13257 17939937 ~ 18012067 (-)
trnal-cag-15 NA coding upstream 777 18026183 ~ 18026265 (-)
trnal-cag-16 NA coding upstream 1349 18026755 ~ 18026837 (-)
trnal-cag-17 NA coding upstream 7083 18032489 ~ 18032571 (-)
trnal-cag-18 NA coding upstream 7655 18033061 ~ 18033143 (-)
trnal-cag-19 NA coding upstream 10960 18036366 ~ 18036448 (-)
G1522995 NA non-coding downstream 138569 17882977 ~ 17886755 (-)
G1522993 NA non-coding downstream 144883 17880017 ~ 17880441 (-)
G1522991 NA non-coding downstream 150500 17874608 ~ 17874824 (-)
G1522981 NA non-coding downstream 170092 17854923 ~ 17855232 (-)
G1523045 NA non-coding upstream 59118 18084524 ~ 18087754 (-)
G1523056 NA non-coding upstream 79213 18104619 ~ 18105012 (-)
G1523063 atr non-coding upstream 88065 18113471 ~ 18114182 (-)
G1523081 NA non-coding upstream 137808 18163214 ~ 18163965 (-)
G1523073 LOC106575446 non-coding upstream 175845 18201251 ~ 18202588 (-)
LOC110510546 LOC106575482 other downstream 280426 17719504 ~ 17815003 (-)
LOC118941106 LOC106575483 other downstream 322571 17685551 ~ 17702827 (-)
LOC110528763 LOC106575486 other downstream 355365 17640874 ~ 17671930 (-)
G1522794 NA other downstream 575146 17441659 ~ 17450178 (-)
LOC118941063 LOC106574632 other downstream 1013946 17009382 ~ 17011759 (-)
LOC118941107 NA other upstream 26574 18051980 ~ 18054354 (-)
G1523149 fndc3b other upstream 406687 18432093 ~ 18436052 (-)
ghs-r ghsr other upstream 420181 18445083 ~ 18447303 (-)
G1523234 NA other upstream 515739 18541145 ~ 18541711 (-)
G1523241 NA other upstream 536500 18561906 ~ 18567247 (-)

Expression



Co-expression Network