LOC110495693 (LOC105019803)


Basic Information

Item Value
gene id LOC110495693
gene name LOC105019803
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 18076200 ~ 18093990 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036952108.1
GCAGAgctgaggaagagagggagttcTGAAGGTCTGTTTTAGAGGTAGACAGACTAATTAGACAGACTAATGAGGTCGGCGTGTGTCGAGACAACGTATAGAGACAACGTATAGAGGCTGGAGTCTCTGGAGGACCACGCCCATCCCAGAGTTCAATGGGCCGAAGGTCTCTTGTCCTCCGCTGCTTCGGTCAAGACAGCGAGCAAGAAGACACCTGACCACCTCTAAACCTCTACCAAGCTTCTCCAGCCCTGTCTGATCCTCTCTTCACGTGCAGCTGAACAACTCCTAGCCTCTTGTTAGGCCAGTCGGCAGACCCGCTCTACTCAGCCAGGAGTGACTGAACGCGGGGAGCAGAGAGACCTTGGCCCCTCTCGTCCAGAACAGAACCAAACAGACACAGGCTTTTATGAAGGTAATCTAGATAGACTGTCCAGTATGGCGAAAAAGGTGACCCAGATTTCACGAGAGGACCTGGAGGAGCTCCGGGAGGCTTTCAACAGGATCGACACTGACAACAGTGGTTTTGTCAGTGACTTTGAGCTGCAGGAGCTGTTCAGAGAGGCTAGTTTCTCCATGCCAGGCTACAGAGTCAGAGACATAGTGGAGATCTTTGTAGCAGGAGACACCAACAAGGACGGGAAGATCAGCTTTGAAGAGTTCGTCTCGATCTACCAGGAGCTGAAGAGTAAGGAGCTCAGTGAGACGTTCAAGAAAACCATCGCCAGGAGAGAAGGGATACAATCCTTTGGAGGATTGTCAGGAATCTCCAGCGAGGGAACACAGCACTCCTactcagatGAGGAGAAGGTGGCATTTGTGAACTGGATCAACAAGTCTCTGGCCAAAGATGAAGACTGTAAACACCTTCTACCCATGAACCCTGACGGAGACAGTCTCTTCAAATCAGTAAAAGATGGGATACTGctctgTAAAATGATCAACCTCTCCCAGTCTGACACCATCGATGAGAGAGTCATCAACACCAAGAAACAAACCACCTTTACCATGACtgAGAACCTGATGCTGGCGATAAACTCTGCATTGTCTATCGGCTGTACCGTGGTCAACATCGACGCCCCTGACCTGATGGCTGGGAAACCCCACCTGGTGCTGGGGCTGCTTTGGCAGATTATCAAGATAGGACTGTTTGCTGACATAGAGATCAGCAGCAacgaagCTCTTATTAACCTGCTGTTTGAGGGGGAGGAGTTAGAGCACCTGATGTCATTGTCTCCTGAAGAACTGTTGCTACGCTGGGTCAACCATCACCTAGGCAACGCTGGGGCCCAACCAATCAGCAACTTCAGCCAAGACATCAAGGATTCCAGGGCGTATTTCACCCTGTTGGACCAGATCTCACCTAATGGAGAGGACATAGACGAGATGGCCATCCACATCGATATGACCGGCATCAATgagcGTGACGACGAACGCAGGGCAGAGATGATGCTTCGCCAGGCAGCCCGTCTGGACTGCAGACAGTTTGTGTCTCCTATGGATGTGGTGTCTGGCAACAGCAAGCTGAACCTGGCTTTCGTAGCCAACCTCTTCAACACACACCCGGCCCTGAAGAGGACTAACAGCAACAACATAGACACAGCACTCATagaggGAGAATCCAGAGAGGAGAAAACATTCAGGAACTGGATGAACTCTCTGGGAGTTGCTCCCTATGTCAACCACCTCTACTGtgacCTGTGTGATGCGGTGGTGATTCTCCAGTTGTATGAGAAAGTCAACGTCCCTGTAGAGTGGAAAAAAGTCAACAGACCTCCATACTCTGCACTGGGCAGTAACATGaagaagttggaGAACTGTACCTATGCGGTGGAACTGGGTCAGAATAAAGCTCGATTCTCATTGGTGGGAATTGGAGGAGTGAATCTGAACGAGGGAAGTCCCATGCACACACTGGCTCTGGTCTGGCAGCTGATGAGGAGGTACACTCTCCAGGTGTTGTCTGATCTAGGAGATGGGGAGAAGATTGGAGACCAGATTATAATCAACTGGGTCAACACTCAGCTCAAAGAGGGAGGCAAGGACTCACAGATCAGCAGCTTCAAGgATAAGCTGATCAGTACTAGTCTCCCAGTGATAGACTTGTTAGACACCATCGCACCCAAATCTATCAAAGAGGAGCTGGTGAAGAGAGGGGAGCTCAGCGATGCAGACAAGCTCAACAACGCCAAGTACGCTATCACGGTATCCAGGAAGATTGGAGCCCGTGTCTACGCTCTGCCTGATGACCTGGTCGAGGTGAAACCCAAGATGGTTCTGACTGTGTTCGCATGCCTGATGGGGAGGGGCATGAAGAAAGCTGAcggctgaacacacacacacacgctcagacacactAACAGCCTGTCCCAATTGGCTCCTTACCCTttaccctcttcctgtctccTGCACATCTAGTCTGTGATTAGATCAGTGTATATAATCGGAGCACAGCTGATTGTTCATTAAACATTTCTTTCATACTGATAGAAAGCGAGCGGTTATGTGCCTAGTGTGCTCAAGGAGGCACTGATGGATCATTTTAATATCTCTAAATTATGTTAATGTATTAATTCATTCTGCGTAAAAGAAACAACAGAATAGAATTATAAATCTATGTAGTGAAGGGGACATGAACCCTTTGGTTTCAATCACAAACACACCTTACATAACTAACAGTACAGACACACTACAGACCTGTAAATGTTGTGTAATTCTCTTGACTTAGTAAACTCAATCGACTGTCGATAATATCCTGGCAGCCTGACATTTTCTTCAtgcaaattgtgtgtgtgtgtgtgtgggaggggtggTGGATTTTTGAATACTCAATCATAAACACATATAATAAAACCCATTTAATAAA
>XM_036952107.1
gctgaggaagagagggagttcTGAAGGTCTGTTTTAGAGGTAGACAGACTAATTAGACAGACTAATGAGGTCGGCGTGTGTCGAGACAACGTATAGAGACAACGTATAGAGGTGTGTGTTATTTGGTTCAGGGAGAGTGTGGGACTTGTGTGTttctgaagagaggagagggggaggccgGATCCCTGTTATCCTGCAGGTCGGATCCTAAACCTCTCAGCAGGCTGGCTGGAGTCTCTGGAGGACCACGCCCATCCCAGAGTTCAATGGGCCGAAGGTCTCTTGTCCTCCGCTGCTTCGGTCAAGACAGCGAGCAAGAAGACACCTGACCACCTCTAAACCTCTACCAAGCTTCTCCAGCCCTGTCTGATCCTCTCTTCACGTGCAGCTGAACAACTCCTAGCCTCTTGTTAGGCCAGTCGGCAGACCCGCTCTACTCAGCCAGGAGTGACTGAACGCGGGGAGCAGAGAGACCTTGGCCCCTCTCGTCCAGAACAGAACCAAACAGACACAGGCTTTTATGAAGGTAATCTAGATAGACTGTCCAGTATGGCGAAAAAGGTGACCCAGATTTCACGAGAGGACCTGGAGGAGCTCCGGGAGGCTTTCAACAGGATCGACACTGACAACAGTGGTTTTGTCAGTGACTTTGAGCTGCAGGAGCTGTTCAGAGAGGCTAGTTTCTCCATGCCAGGCTACAGAGTCAGAGACATAGTGGAGATCTTTGTAGCAGGAGACACCAACAAGGACGGGAAGATCAGCTTTGAAGAGTTCGTCTCGATCTACCAGGAGCTGAAGAGTAAGGAGCTCAGTGAGACGTTCAAGAAAACCATCGCCAGGAGAGAAGGGATACAATCCTTTGGAGGATTGTCAGGAATCTCCAGCGAGGGAACACAGCACTCCTactcagatGAGGAGAAGGTGGCATTTGTGAACTGGATCAACAAGTCTCTGGCCAAAGATGAAGACTGTAAACACCTTCTACCCATGAACCCTGACGGAGACAGTCTCTTCAAATCAGTAAAAGATGGGATACTGctctgTAAAATGATCAACCTCTCCCAGTCTGACACCATCGATGAGAGAGTCATCAACACCAAGAAACAAACCACCTTTACCATGACtgAGAACCTGATGCTGGCGATAAACTCTGCATTGTCTATCGGCTGTACCGTGGTCAACATCGACGCCCCTGACCTGATGGCTGGGAAACCCCACCTGGTGCTGGGGCTGCTTTGGCAGATTATCAAGATAGGACTGTTTGCTGACATAGAGATCAGCAGCAacgaagCTCTTATTAACCTGCTGTTTGAGGGGGAGGAGTTAGAGCACCTGATGTCATTGTCTCCTGAAGAACTGTTGCTACGCTGGGTCAACCATCACCTAGGCAACGCTGGGGCCCAACCAATCAGCAACTTCAGCCAAGACATCAAGGATTCCAGGGCGTATTTCACCCTGTTGGACCAGATCTCACCTAATGGAGAGGACATAGACGAGATGGCCATCCACATCGATATGACCGGCATCAATgagcGTGACGACGAACGCAGGGCAGAGATGATGCTTCGCCAGGCAGCCCGTCTGGACTGCAGACAGTTTGTGTCTCCTATGGATGTGGTGTCTGGCAACAGCAAGCTGAACCTGGCTTTCGTAGCCAACCTCTTCAACACACACCCGGCCCTGAAGAGGACTAACAGCAACAACATAGACACAGCACTCATagaggGAGAATCCAGAGAGGAGAAAACATTCAGGAACTGGATGAACTCTCTGGGAGTTGCTCCCTATGTCAACCACCTCTACTGtgacCTGTGTGATGCGGTGGTGATTCTCCAGTTGTATGAGAAAGTCAACGTCCCTGTAGAGTGGAAAAAAGTCAACAGACCTCCATACTCTGCACTGGGCAGTAACATGaagaagttggaGAACTGTACCTATGCGGTGGAACTGGGTCAGAATAAAGCTCGATTCTCATTGGTGGGAATTGGAGGAGTGAATCTGAACGAGGGAAGTCCCATGCACACACTGGCTCTGGTCTGGCAGCTGATGAGGAGGTACACTCTCCAGGTGTTGTCTGATCTAGGAGATGGGGAGAAGATTGGAGACCAGATTATAATCAACTGGGTCAACACTCAGCTCAAAGAGGGAGGCAAGGACTCACAGATCAGCAGCTTCAAGgATAAGCTGATCAGTACTAGTCTCCCAGTGATAGACTTGTTAGACACCATCGCACCCAAATCTATCAAAGAGGAGCTGGTGAAGAGAGGGGAGCTCAGCGATGCAGACAAGCTCAACAACGCCAAGTACGCTATCACGGTATCCAGGAAGATTGGAGCCCGTGTCTACGCTCTGCCTGATGACCTGGTCGAGGTGAAACCCAAGATGGTTCTGACTGTGTTCGCATGCCTGATGGGGAGGGGCATGAAGAAAGCTGAcggctgaacacacacacacacgctcagacacactAACAGCCTGTCCCAATTGGCTCCTTACCCTttaccctcttcctgtctccTGCACATCTAGTCTGTGATTAGATCAGTGTATATAATCGGAGCACAGCTGATTGTTCATTAAACATTTCTTTCATACTGATAGAAAGCGAGCGGTTATGTGCCTAGTGTGCTCAAGGAGGCACTGATGGATCATTTTAATATCTCTAAATTATGTTAATGTATTAATTCATTCTGCGTAAAAGAAACAACAGAATAGAATTATAAATCTATGTAGTGAAGGGGACATGAACCCTTTGGTTTCAATCACAAACACACCTTACATAACTAACAGTACAGACACACTACAGACCTGTAAATGTTGTGTAATTCTCTTGACTTAGTAAACTCAATCGACTGTCGATAATATCCTGGCAGCCTGACATTTTCTTCAtgcaaattgtgtgtgtgtgtgtgtgggaggggtggTGGATTTTTGAATACTCAATCATAAACACATATAATAAAACCCATTTAATAAA
>XM_036952109.1
gctgaggaagagagggagttcTGAAGGTCTGTTTTAGAGGTAGACAGACTAATTAGACAGACTAATGAGGTCGGCGTGTGTCGAGACAACGTATAGAGACAACGTATAGAGGTGTGTGTTATTTGGTTCAGGGAGAGTGTGGGACTTGTGTGTttctgaagagaggagagggggaggccgGATCCCTGTTATCCTGCAGGTCGGATCCTAAACCTCTCAGCAGGCTGGCTGGAGTCTCTGGAGGACCACGCCCATCCCAGAGTTCAATGGGCCGAAGGTCTCTTGTCCTCCGCTGCTTCGGTCAAGACAGCGAGCAAGAAGACACCTGACCACCTCTAAACCTCTACCAAGCTTCTCCAGCCCTGTCTGATCCTCTCTTCACGCTGAACAACTCCTAGCCTCTTGTTAGGCCAGTCGGCAGACCCGCTCTACTCAGCCAGGAGTGACTGAACGCGGGGAGCAGAGAGACCTTGGCCCCTCTCGTCCAGAACAGAACCAAACAGACACAGGCTTTTATGAAGGTAATCTAGATAGACTGTCCAGTATGGCGAAAAAGGTGACCCAGATTTCACGAGAGGACCTGGAGGAGCTCCGGGAGGCTTTCAACAGGATCGACACTGACAACAGTGGTTTTGTCAGTGACTTTGAGCTGCAGGAGCTGTTCAGAGAGGCTAGTTTCTCCATGCCAGGCTACAGAGTCAGAGACATAGTGGAGATCTTTGTAGCAGGAGACACCAACAAGGACGGGAAGATCAGCTTTGAAGAGTTCGTCTCGATCTACCAGGAGCTGAAGAGTAAGGAGCTCAGTGAGACGTTCAAGAAAACCATCGCCAGGAGAGAAGGGATACAATCCTTTGGAGGATTGTCAGGAATCTCCAGCGAGGGAACACAGCACTCCTactcagatGAGGAGAAGGTGGCATTTGTGAACTGGATCAACAAGTCTCTGGCCAAAGATGAAGACTGTAAACACCTTCTACCCATGAACCCTGACGGAGACAGTCTCTTCAAATCAGTAAAAGATGGGATACTGctctgTAAAATGATCAACCTCTCCCAGTCTGACACCATCGATGAGAGAGTCATCAACACCAAGAAACAAACCACCTTTACCATGACtgAGAACCTGATGCTGGCGATAAACTCTGCATTGTCTATCGGCTGTACCGTGGTCAACATCGACGCCCCTGACCTGATGGCTGGGAAACCCCACCTGGTGCTGGGGCTGCTTTGGCAGATTATCAAGATAGGACTGTTTGCTGACATAGAGATCAGCAGCAacgaagCTCTTATTAACCTGCTGTTTGAGGGGGAGGAGTTAGAGCACCTGATGTCATTGTCTCCTGAAGAACTGTTGCTACGCTGGGTCAACCATCACCTAGGCAACGCTGGGGCCCAACCAATCAGCAACTTCAGCCAAGACATCAAGGATTCCAGGGCGTATTTCACCCTGTTGGACCAGATCTCACCTAATGGAGAGGACATAGACGAGATGGCCATCCACATCGATATGACCGGCATCAATgagcGTGACGACGAACGCAGGGCAGAGATGATGCTTCGCCAGGCAGCCCGTCTGGACTGCAGACAGTTTGTGTCTCCTATGGATGTGGTGTCTGGCAACAGCAAGCTGAACCTGGCTTTCGTAGCCAACCTCTTCAACACACACCCGGCCCTGAAGAGGACTAACAGCAACAACATAGACACAGCACTCATagaggGAGAATCCAGAGAGGAGAAAACATTCAGGAACTGGATGAACTCTCTGGGAGTTGCTCCCTATGTCAACCACCTCTACTGtgacCTGTGTGATGCGGTGGTGATTCTCCAGTTGTATGAGAAAGTCAACGTCCCTGTAGAGTGGAAAAAAGTCAACAGACCTCCATACTCTGCACTGGGCAGTAACATGaagaagttggaGAACTGTACCTATGCGGTGGAACTGGGTCAGAATAAAGCTCGATTCTCATTGGTGGGAATTGGAGGAGTGAATCTGAACGAGGGAAGTCCCATGCACACACTGGCTCTGGTCTGGCAGCTGATGAGGAGGTACACTCTCCAGGTGTTGTCTGATCTAGGAGATGGGGAGAAGATTGGAGACCAGATTATAATCAACTGGGTCAACACTCAGCTCAAAGAGGGAGGCAAGGACTCACAGATCAGCAGCTTCAAGgATAAGCTGATCAGTACTAGTCTCCCAGTGATAGACTTGTTAGACACCATCGCACCCAAATCTATCAAAGAGGAGCTGGTGAAGAGAGGGGAGCTCAGCGATGCAGACAAGCTCAACAACGCCAAGTACGCTATCACGGTATCCAGGAAGATTGGAGCCCGTGTCTACGCTCTGCCTGATGACCTGGTCGAGGTGAAACCCAAGATGGTTCTGACTGTGTTCGCATGCCTGATGGGGAGGGGCATGAAGAAAGCTGAcggctgaacacacacacacacgctcagacacactAACAGCCTGTCCCAATTGGCTCCTTACCCTttaccctcttcctgtctccTGCACATCTAGTCTGTGATTAGATCAGTGTATATAATCGGAGCACAGCTGATTGTTCATTAAACATTTCTTTCATACTGATAGAAAGCGAGCGGTTATGTGCCTAGTGTGCTCAAGGAGGCACTGATGGATCATTTTAATATCTCTAAATTATGTTAATGTATTAATTCATTCTGCGTAAAAGAAACAACAGAATAGAATTATAAATCTATGTAGTGAAGGGGACATGAACCCTTTGGTTTCAATCACAAACACACCTTACATAACTAACAGTACAGACACACTACAGACCTGTAAATGTTGTGTAATTCTCTTGACTTAGTAAACTCAATCGACTGTCGATAATATCCTGGCAGCCTGACATTTTCTTCAtgcaaattgtgtgtgtgtgtgtgtgggaggggtggTGGATTTTTGAATACTCAATCATAAACACATATAATAAAACCCATTTAATAAA

Function

NR:

description
plastin-1-like

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function
GO:0003779 actin binding molecular_function

KEGG:

id description
K17336 PLS3; plastin-3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036952108.1 False 2866 mRNA 0.48 18 18076200 18093990
XM_036952107.1 False 2977 mRNA 0.49 18 18076205 18093990
XM_036952109.1 True 2972 mRNA 0.49 18 18076205 18093990

Neighbor

gene id symbol gene type direction distance location
LOC110528909 LOC106595470 coding upstream 1016 18057702 ~ 18075184 (+)
LOC110527394 LOC106591034 coding upstream 22375 18042733 ~ 18053825 (+)
LOC110528768 LOC106591671 coding upstream 237183 17831450 ~ 17839017 (+)
LOC110519433 NA coding upstream 359281 17715037 ~ 17716919 (+)
LOC118936563 LOC106591654 coding upstream 361164 17705378 ~ 17715036 (+)
atr atr coding downstream 3573 18097563 ~ 18129363 (+)
LOC110495694 LOC106575448 coding downstream 37116 18129571 ~ 18136939 (+)
LOC110495707 LOC106574672 coding downstream 49146 18143136 ~ 18145481 (+)
LOC110495710 LOC106574671 coding downstream 62860 18156850 ~ 18158501 (+)
LOC110517300 LOC106575446 coding downstream 82731 18176721 ~ 18224140 (+)
G1522544 NA non-coding upstream 53919 18022058 ~ 18022281 (+)
G1522487 NA non-coding upstream 135489 17938478 ~ 17940711 (+)
G1522466 LOC100534484 non-coding upstream 142919 17921980 ~ 17933281 (+)
G1522498 LOC106575464 non-coding upstream 155107 17920084 ~ 17921093 (+)
G1522477 NA non-coding upstream 186992 17885675 ~ 17889208 (+)
G1522600 NA non-coding downstream 122650 18216640 ~ 18217776 (+)
G1522563 NA non-coding downstream 130792 18224782 ~ 18231387 (+)
G1522601 LOC106575419 non-coding downstream 137900 18231890 ~ 18236181 (+)
G1522604 NA non-coding downstream 145919 18239909 ~ 18241184 (+)
G1522438 NA other upstream 215586 17856141 ~ 17860614 (+)
G1522437 LOC106575479 other upstream 232186 17839669 ~ 17844014 (+)
G1522415 LOC106575491 other upstream 309506 17766219 ~ 17766694 (+)
LOC110527374 LOC106592210 other upstream 448556 17623786 ~ 17631132 (+)
LOC110495674 LOC106575504 other upstream 1607777 16454118 ~ 16468453 (+)
G1522684 NA other downstream 285097 18379087 ~ 18380258 (+)
LOC110495728 LOC106574584 other downstream 500344 18594324 ~ 18595682 (+)
LOC118936474 LOC106574488 other downstream 621872 18702289 ~ 18722091 (+)
LOC110495746 LOC106574508 other downstream 865454 18959384 ~ 18978475 (+)
G1523506 NA other downstream 928015 19022005 ~ 19022395 (+)

Expression


Co-expression Network