LOC110495710 (LOC106574671)


Basic Information

Item Value
gene id LOC110495710
gene name LOC106574671
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 18156850 ~ 18158501 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021571108.2
ccctgtctctgtctctctctcccgctctctctgtctctctctgtctctccctgtctctctgtctctccctctctcgtgtcCTGCTGTAAAAGTGCCACCACTCCACCCTGCAGATTGCCCCTCCCTCTCACAGTACAGGTGGTTACATGGTGGTGTAACACACCCTCCCCACTTtattccccttttctctcctccctctctcctccccttctcctggTGTATAGCAGTCAGCCCAGACAATCGTGGGCTCAGTCTagtcaactagagagagagagagagagaatacagcaCAAGACCTCTGGAGTACCACTGGCAACGGGACGTTTTcttttacatacatacacactcccATTCACACTttcttccacacacacagactcggAAGCGGCAGCATGTTGGTGAACAGGGTCTGGCTTGTGGTGTGtgtgctctgctgtgtgtgtgtgtcggtgtgtgtgaaCGCAGAGGAATATGAAATGAACTACGCAGACAACTATGAAAATGAGATTACACAGGACCAACAGGACGGGGACTCCCCTGTGACTACCTGCCAGGCTACAGAGCTCTCTCGCTGGAACAAACTCTTTGTGGCTCTGGAGGACTCCCACCAGAGGGATATGATGCTGATGGAAGCCCTGGAGCAACGCTGTGGAACCCCGGGAGTCTGCCAGCAGTGCCTGCCCGCCATCGAGGCAGTTTGCCGGGGGCAGGCAGAGCAGGCGAGCCCCAGGCTCCATCGAGGCCTAGTGGAGCTGAAGGAGGAGGTAACAGAACGAGAGGGGAGGATGAATTCTTCAATACAGCAGATCAGGCAGGAGGGAGCAGAAAGTTATGGGAGGATGATGGCTGTGTTACATCATCTCCTTCAGAACAGCAAAGAGCAGAACCATAGACTACATCGATTGGAGGAGAGTAAGCTGAAAGGGGAGGTGACAGAAGGGGCTGGATCTTTTGGAGCCGGGCATAGAGAAGCAGAGCCAATCAGGACAGGGCATAAAGAGAATGGATTTAGGGGAGGCGCTTAGTGGGACAGGTAGACCAATAGGGACGAGACCTGGCAGTGTAGGGGCGGGTCTCGGACTGGGTTTGGGCATGAAGCTGTTCCCGTCAAGCACAAAgaaacaggaagtgacatcatcgGACCCGGGAAAGATTGAGCGGCCTCTGGTTGCTATAGCGATGGAAAAGCAGAAGGTACAGACCCAGCTGGGCCTAATATCCTCTGTAGGGAACGAAGGATGAAAAAATACGAGGAGAAATTAAAGGAAGGATATCTGATGGATATTGTCCTCTATCAGGGACTGAATTAAAACTAAAATATAAACTTTTTGAAATTTTGAAATTTTATACAATAGTAAAGCAAAACAATCGCCTTGAAATATGTTTAGTATTCTTTTAAATTCTGTATAATTAAAGGAAATGCTCTGTGACTCTAATTGTCTAAGTGATGAATAAAGATTTGTTAAA

Function

NR:

description
uncharacterized protein LOC110495710

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021571108.2 True 1467 mRNA 0.50 2 18156850 18158501

Neighbor

gene id symbol gene type direction distance location
LOC110495707 LOC106574672 coding upstream 11369 18143136 ~ 18145481 (+)
LOC110495694 LOC106575448 coding upstream 19911 18129571 ~ 18136939 (+)
atr atr coding upstream 27487 18097563 ~ 18129363 (+)
LOC110495693 LOC105019803 coding upstream 62860 18076200 ~ 18093990 (+)
LOC110528909 LOC106595470 coding upstream 81666 18057702 ~ 18075184 (+)
LOC110517300 LOC106575446 coding downstream 18220 18176721 ~ 18224140 (+)
LOC110497069 ppp2r3a coding downstream 93237 18251738 ~ 18305237 (+)
LOC110495706 LOC105019796 coding downstream 151480 18309981 ~ 18432516 (+)
LOC110497071 LOC106574566 coding downstream 289933 18448434 ~ 18480492 (+)
tspan37 LOC106574474 coding downstream 322276 18480777 ~ 18484626 (+)
G1522544 NA non-coding upstream 134569 18022058 ~ 18022281 (+)
G1522487 NA non-coding upstream 216139 17938478 ~ 17940711 (+)
G1522466 LOC100534484 non-coding upstream 223569 17921980 ~ 17933281 (+)
G1522498 LOC106575464 non-coding upstream 235757 17920084 ~ 17921093 (+)
G1522600 NA non-coding downstream 58139 18216640 ~ 18217776 (+)
G1522563 NA non-coding downstream 66281 18224782 ~ 18231387 (+)
G1522601 LOC106575419 non-coding downstream 73389 18231890 ~ 18236181 (+)
G1522604 NA non-coding downstream 81408 18239909 ~ 18241184 (+)
G1522605 NA non-coding downstream 82763 18241264 ~ 18242350 (+)
G1522438 NA other upstream 296236 17856141 ~ 17860614 (+)
G1522437 LOC106575479 other upstream 312836 17839669 ~ 17844014 (+)
G1522415 LOC106575491 other upstream 390156 17766219 ~ 17766694 (+)
LOC110527374 LOC106592210 other upstream 529206 17623786 ~ 17631132 (+)
LOC110495674 LOC106575504 other upstream 1688427 16454118 ~ 16468453 (+)
G1522684 NA other downstream 220586 18379087 ~ 18380258 (+)
LOC110495728 LOC106574584 other downstream 435833 18594324 ~ 18595682 (+)
LOC118936474 LOC106574488 other downstream 557361 18702289 ~ 18722091 (+)
LOC110495746 LOC106574508 other downstream 800943 18959384 ~ 18978475 (+)
G1523506 NA other downstream 863504 19022005 ~ 19022395 (+)

Expression


Co-expression Network