LOC110495700 (LOC106594337)


Basic Information

Item Value
gene id LOC110495700
gene name LOC106594337
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 18160955 ~ 18167363 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021571086.2
ATATAGATGTGGGATAGAGAAGGACCATTAGTTCCCCGCTGGGACCagatctgtctctgtgtgtgtgcgtgagtttgtgcgtgtgtggttgtccgtgcgtgcgtgcgtgcatacataaacgcgcacacacacaaacgtgacTGACAGTGGTCAGTGTTTATGATGATGATTTTTGGTCGCTATGCATGCTTAAGCATAATGACATCGttccctcttctctcactctctctctccacggtcgGGCAAGCTGAGAAGcgcagctgctgtgtgtgtgagtgagggaggACGGGTGAGGGATCGGGAGACAGAAAAGGAGGAAGGATTTTTATCACCGACACTCTCTACCCCTGTGGTCGACAACAGTGCTCTACCGGCGGTTGGAGGAGCCAGATAGACCCGTTGGGCGACTGGTAACCTTGGAGGCACGCCAAACCACCCATGAGGAGGAAAGCGGGTGGAAGGATGCCTCTTTCCCTGATCTGACAGAAGACATTTGTTCGGTGAATGAGCGGAGGGCACCGAATTGACGCAATACAGTAGgtgagTAACCATGGAATCCACACACCTCCTGGACGGCTCCAAGAAACGGGTGAAGATCCACCCTCACACCGTCACCGCCAAGTACgccccacacacaccccacacacacacacacttcccccagCCCGGAGACGAGGGGTACGATGATGCTCCCTCCTTCGAGGACTTCGGCTCCTTCCTGGAGGAGACCTCGGACAAGAAACAGCTGACAGGAACCAGGAAGTGGACAGGAAAGGCCGGTGCTCTGTTTGGAGGGAAGGACAAAAACAAAGACACACCCCCTAGACCTCCcatggggggaggggaggggggtgtggagggaggagggaagggtgcAGGAGGGGGAGTAGGGGAGCAGCTAGCGAGTTTCGGCGAGGCGTCTGTCTCTGCGTCTCGGCTCACGTGGGCCAGTGTGGTCTTGGCGGGGCTGGCtcacggctgtgtgtgtgttctgacacgCCTGGCCGCCTCACACTTTAACCTCCCACCCTTAACTCTCCTCTTGGTACGATCCATCCTCCAGCTGCTCTATGGGACTGTACCAATGAAACGGGCGGAGACGGCCTTTGGCTCAAAGGGCTATCGGCGGAAGCTGCTCCTGTACGGTCTGActcactccttctccctctgctgcGCTTACTCGTCCTTATCCTTCGTCTCCCTCGGCGACGACGAGGCCATGTTGACAACCTGGCGCCTGGCGACCACCGTCCTGTCGGCCACTCTGGCGTTGTTGCTCCTGGACGAGCGGCTGGGATTGGTGGACCTGGTCACCGTAGCGACAGGCGTGTTAGGACTGGGTCTGGCGCTCGTTCCTAACCCAACAGGGCTGGATGAGAACAACAACGGGACCGGGTCAGGGATGCCCAATGGGGGGATACCCAATGGGGGGATACCCAATGGGGCGACACCGGCACAACAATCGGCCCAGTTCTGGCGGGAAGCGTTTGGTTGGTCCCTGACTGTTCTCGCAGGACTATGGATGTCTCTGGCTCTAGTCATGTACCGCTCTCTGAAGGAGCGGGTCAGTGTCGGCACAGCTCTGTTCACTGTCAGTTGGACCGGCTGTCTGAGCACCGCAGTCTCCATGCTTCTCCTCCGACAGGGGCCAGTGTGGCCGGCCAGTCTCCAGGCTTGGTGCATCGTCCTGGGGGTAGCTGTGTGCTCTGCTGGGGGGTTCGTGGGGGTGACCCATGGCCTCACCCGACTTCACCCAGCTTTGGTGTCGGCTACACAGGGTCTGGAAGTACCGGTCGCTATGGTGCTGGAGATCGCTGTTGTGCCATTGGTTCCCTCAGTGTGTGAGGTCATAgggggtgtggtggtggtggcgagCGTGGGTTGGCTTGTTACAGTGAAGCTCCTCCCCTCTCGAGGAAgtgggaggaaacagagagaagagTACGAAGAGATTCTGGACTCGCCAATTAAatagcacacacgcacacgaaaGCACATGCACGCACAAAGATTCTGGACTTACCAATCAAATAGACCACTCCCCTTCTATCTatgtttctgtctttctctcttttcccagggggtttgctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctcagtgtgtatATAAGAGGACTCTATGGTGAATGTTAATGCTTGAGCTAAAATAGCTGTCTTTAACcacagatctagaatcagatACACCAACTCCAATCCTTAACTTAACCATTAGGAGGTGTCAAaatatctgaccctgtatcagtggttaGGGAAAACATCTACCTACCCCAATGTGAATAGTAAATGTATCTATTTTGTATTGTAGTTGTTGTAATTGTTGTGAAGTAGCAATACTGTGTTGTCTTACTGGCTATTGTGATAGTGTGATGTCATATTAAAACCTCACTGTCTTACTGTGA
>XM_036952114.1
ATATAGATGTGGGATAGAGAAGGACCATTAGTTCCCCGCTGGGACCagatctgtctctgtgtgtgtgcgtgagtttgtgcgtgtgtggttgtccgtgcgtgcgtgcgtgcatacataaacgcgcacacacacaaacgtgacTGACAGTGGTCAGTGTTTATGATGATGATTTTTGGTCGCTATGCATGCTTAAGCATAATGACATCGttccctcttctctcactctctctctccacggtcgGGCAAGCTGAGAAGcgcagctgctgtgtgtgtgagtgagggaggACGGGTGAGGGATCGGGAGACAGAAAAGGAGGAAGGATTTTTATCACCGACACTCTCTACCCCTGTGGTCGACAACAGTGCTCTACCGGCGGTTGGAGGAGCCAGATAGACCCGTTGGGCGACTGGTAACCTTGGAGGCACGCCAAACCACCCATGAGGAGGAAAGCGGGTGGAAGGATGCCTCTTTCCCTGATCTGACAGAAGACATTTGTTCGGTGAATGAGCGGAGGGCACCGAATTGACGCAATACAGTAGgtgagTAACCATGGAATCCACACACCTCCTGGACGGCTCCAAGAAACGGGTGAAGATCCACCCTCACACCGTCACCGCCAAGTACgccccacacacaccccacacacacacacacttcccccagCCCGGAGACGAGGGGTACGATGATGCTCCCTCCTTCGAGGACTTCGGCTCCTTCCTGGAGGAGACCTCGGACAAGAAACAGCTGACAGGAACCAGGAAGTGGACAGGAAAGGCCGGTGCTCTGTTTGGAGGGAAGGACAAAAACAAAGACACACCCCCTAGACCTCCcatggggggaggggaggggggtgtggagggaggagggaagggtgcAGGAGGGGGAGTAGGGGAGCAGCTAGCGAGTTTCGGCGAGGCGTCTGTCTCTGCGTCTCGGCTCACGTGGGCCAGTGTGGTCTTGGCGGGGCTGGCtcacggctgtgtgtgtgttctgacacgCCTGGCCGCCTCACACTTTAACCTCCCACCCTTAACTCTCCTCTTGGTACGATCCATCCTCCAGCTGCTCTATGGGACTGTACCAATGAAACGGGCGGAGACGGCCTTTGGCTCAAAGGGCTATCGGCGGAAGCTGCTCCTGTACGGTCTGActcactccttctccctctgctgcGCTTACTCGTCCTTATCCTTCGTCTCCCTCGGCGACGACGAGGCCATGTTGACAACCTGGCGCCTGGCGACCACCGTCCTGTCGGCCACTCTGGCGTTGTTGCTCCTGGACGAGCGGCTGGGATTGGTGGACCTGGTCACCGTAGCGACAGGCGTGTTAGGACTGGGTCTGGCGCTCGTTCCTAACCCAACAGGGCTGGATGAGAACAACAACGGGACCGGGTCAGGGATGCCCAATGGGGCGACACCGGCACAACAATCGGCCCAGTTCTGGCGGGAAGCGTTTGGTTGGTCCCTGACTGTTCTCGCAGGACTATGGATGTCTCTGGCTCTAGTCATGTACCGCTCTCTGAAGGAGCGGGTCAGTGTCGGCACAGCTCTGTTCACTGTCAGTTGGACCGGCTGTCTGAGCACCGCAGTCTCCATGCTTCTCCTCCGACAGGGGCCAGTGTGGCCGGCCAGTCTCCAGGCTTGGTGCATCGTCCTGGGGGTAGCTGTGTGCTCTGCTGGGGGGTTCGTGGGGGTGACCCATGGCCTCACCCGACTTCACCCAGCTTTGGTGTCGGCTACACAGGGTCTGGAAGTACCGGTCGCTATGGTGCTGGAGATCGCTGTTGTGCCATTGGTTCCCTCAGTGTGTGAGGTCATAgggggtgtggtggtggtggcgagCGTGGGTTGGCTTGTTACAGTGAAGCTCCTCCCCTCTCGAGGAAgtgggaggaaacagagagaagagTACGAAGAGATTCTGGACTCGCCAATTAAatagcacacacgcacacgaaaGCACATGCACGCACAAAGATTCTGGACTTACCAATCAAATAGACCACTCCCCTTCTATCTatgtttctgtctttctctcttttcccagggggtttgctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctcagtgtgtatATAAGAGGACTCTATGGTGAATGTTAATGCTTGAGCTAAAATAGCTGTCTTTAACcacagatctagaatcagatACACCAACTCCAATCCTTAACTTAACCATTAGGAGGTGTCAAaatatctgaccctgtatcagtggttaGGGAAAACATCTACCTACCCCAATGTGAATAGTAAATGTATCTATTTTGTATTGTAGTTGTTGTAATTGTTGTGAAGTAGCAATACTGTGTTGTCTTACTGGCTATTGTGATAGTGTGATGTCATATTAAAACCTCACTGTCTTACTGTGA
>XM_036952113.1
AAATATAGATGTGGGATAGAGAAGGACCATTAGTTCCCCGCTGGGACCagatctgtctctgtgtgtgtgcgtgagtttgtgcgtgtgtggttgtccgtgcgtgcgtgcgtgcatacataaacgcgcacacacacaaacgtgacTGACAGTGGTCAGTGTTTATGATGATGATTTTTGGTCGCTATGCATGCTTAAGCATAATGACATCGttccctcttctctcactctctctctccacggtcgGGCAAGCTGAGAAGcgcagctgctgtgtgtgtgagtgagggaggACGGGTGAGGGATCGGGAGACAGAAAAGGAGGAAGGATTTTTATCACCGACACTCTCTACCCCTGTGGTCGACAACAGTGCTCTACCGGCGGTTGGAGGAGCCAGATAGACCCGTTGGGCGACTGGTAACCTTGGAGGCACGCCAAACCACCCATGAGGAGGAAAGCGGGTGGAAGGATGCCTCTTTCCCTGATCTGACAGAAGACATTTGTTCGGTGAATGAGCGGAGGGCACCGAATTGACGCAATACAgtgagTAACCATGGAATCCACACACCTCCTGGACGGCTCCAAGAAACGGGTGAAGATCCACCCTCACACCGTCACCGCCAAGTACgccccacacacaccccacacacacacacacttcccccagCCCGGAGACGAGGGGTACGATGATGCTCCCTCCTTCGAGGACTTCGGCTCCTTCCTGGAGGAGACCTCGGACAAGAAACAGCTGACAGGAACCAGGAAGTGGACAGGAAAGGCCGGTGCTCTGTTTGGAGGGAAGGACAAAAACAAAGACACACCCCCTAGACCTCCcatggggggaggggaggggggtgtggagggaggagggaagggtgcAGGAGGGGGAGTAGGGGAGCAGCTAGCGAGTTTCGGCGAGGCGTCTGTCTCTGCGTCTCGGCTCACGTGGGCCAGTGTGGTCTTGGCGGGGCTGGCtcacggctgtgtgtgtgttctgacacgCCTGGCCGCCTCACACTTTAACCTCCCACCCTTAACTCTCCTCTTGGTACGATCCATCCTCCAGCTGCTCTATGGGACTGTACCAATGAAACGGGCGGAGACGGCCTTTGGCTCAAAGGGCTATCGGCGGAAGCTGCTCCTGTACGGTCTGActcactccttctccctctgctgcGCTTACTCGTCCTTATCCTTCGTCTCCCTCGGCGACGACGAGGCCATGTTGACAACCTGGCGCCTGGCGACCACCGTCCTGTCGGCCACTCTGGCGTTGTTGCTCCTGGACGAGCGGCTGGGATTGGTGGACCTGGTCACCGTAGCGACAGGCGTGTTAGGACTGGGTCTGGCGCTCGTTCCTAACCCAACAGGGCTGGATGAGAACAACAACGGGACCGGGTCAGGGATGCCCAATGGGGGGATACCCAATGGGGGGATACCCAATGGGGCGACACCGGCACAACAATCGGCCCAGTTCTGGCGGGAAGCGTTTGGTTGGTCCCTGACTGTTCTCGCAGGACTATGGATGTCTCTGGCTCTAGTCATGTACCGCTCTCTGAAGGAGCGGGTCAGTGTCGGCACAGCTCTGTTCACTGTCAGTTGGACCGGCTGTCTGAGCACCGCAGTCTCCATGCTTCTCCTCCGACAGGGGCCAGTGTGGCCGGCCAGTCTCCAGGCTTGGTGCATCGTCCTGGGGGTAGCTGTGTGCTCTGCTGGGGGGTTCGTGGGGGTGACCCATGGCCTCACCCGACTTCACCCAGCTTTGGTGTCGGCTACACAGGGTCTGGAAGTACCGGTCGCTATGGTGCTGGAGATCGCTGTTGTGCCATTGGTTCCCTCAGTGTGTGAGGTCATAgggggtgtggtggtggtggcgagCGTGGGTTGGCTTGTTACAGTGAAGCTCCTCCCCTCTCGAGGAAgtgggaggaaacagagagaagagTACGAAGAGATTCTGGACTCGCCAATTAAatagcacacacgcacacgaaaGCACATGCACGCACAAAGATTCTGGACTTACCAATCAAATAGACCACTCCCCTTCTATCTatgtttctgtctttctctcttttcccagggggtttgctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctcagtgtgtatATAAGAGGACTCTATGGTGAATGTTAATGCTTGAGCTAAAATAGCTGTCTTTAACcacagatctagaatcagatACACCAACTCCAATCCTTAACTTAACCATTAGGAGGTGTCAAaatatctgaccctgtatcagtggttaGGGAAAACATCTACCTACCCCAATGTGAATAGTAAATGTATCTATTTTGTATTGTAGTTGTTGTAATTGTTGTGAAGTAGCAATACTGTGTTGTCTTACTGGCTATTGTGATAGTGTGATGTCATATTAAAACCTCACTGTCTTACTGTGA

Function

NR:

description
solute carrier family 35 member G2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021571086.2 False 2569 mRNA 0.54 2 18160955 18167361
XM_036952114.1 False 2539 mRNA 0.54 3 18160955 18167361
XM_036952113.1 True 2567 mRNA 0.54 2 18160955 18167363

Neighbor

gene id symbol gene type direction distance location
LOC118941107 NA coding downstream 106601 18051980 ~ 18054354 (-)
trnal-cag-26 NA coding downstream 119456 18041417 ~ 18041499 (-)
trnal-cag-25 NA coding downstream 120302 18040571 ~ 18040653 (-)
trnal-cag-24 NA coding downstream 121070 18039803 ~ 18039885 (-)
trnal-cag-23 NA coding downstream 121642 18039231 ~ 18039313 (-)
LOC110495699 LOC106574468 coding upstream 57419 18224782 ~ 18231424 (-)
LOC110497068 LOC106574469 coding upstream 64526 18231889 ~ 18237893 (-)
ghs-r ghsr coding upstream 277720 18445083 ~ 18447303 (-)
LOC110497072 LOC106574477 coding upstream 332463 18499826 ~ 18513863 (-)
LOC118941108 LOC106575244 coding upstream 428421 18595784 ~ 18603170 (-)
G1523063 atr non-coding downstream 46773 18113471 ~ 18114182 (-)
G1523056 NA non-coding downstream 55943 18104619 ~ 18105012 (-)
G1523045 NA non-coding downstream 73201 18084524 ~ 18087754 (-)
trnal-cag-10 NA non-coding downstream 138259 18022401 ~ 18022696 (-)
G1522995 NA non-coding downstream 274200 17882977 ~ 17886755 (-)
G1523073 LOC106575446 non-coding upstream 33888 18201251 ~ 18202588 (-)
G1523114 NA non-coding upstream 71155 18238518 ~ 18238736 (-)
G1523115 NA non-coding upstream 71787 18239150 ~ 18239685 (-)
G1523116 NA non-coding upstream 72558 18239921 ~ 18240135 (-)
G1523122 NA non-coding upstream 85334 18252697 ~ 18253031 (-)
LOC110510546 LOC106575482 other downstream 416057 17719504 ~ 17815003 (-)
LOC118941106 LOC106575483 other downstream 458202 17685551 ~ 17702827 (-)
LOC110528763 LOC106575486 other downstream 490996 17640874 ~ 17671930 (-)
G1522794 NA other downstream 710777 17441659 ~ 17450178 (-)
G1523149 fndc3b other upstream 264730 18432093 ~ 18436052 (-)
G1523234 NA other upstream 373782 18541145 ~ 18541711 (-)
G1523241 NA other upstream 394543 18561906 ~ 18567247 (-)
G1524311 NA other upstream 581762 18749125 ~ 18749395 (-)

Expression

LOC110495700(LOC106594337) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
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LOC110495700(LOC106594337) Expression in each Bioproject

Bar chart with 17 bars.
LOC110495700(LOC106594337) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
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Co-expression Network