LOC110497068 (LOC106574469)


Basic Information

Item Value
gene id LOC110497068
gene name LOC106574469
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 18231889 ~ 18237893 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036952123.1
tttacgttttttttttaagtatttatCTGCAAAGTTAATCAAAATGAATtgataaagtttaaaaaaaagctAAACAAATTGCCGTGGATTTGAGAGATGTCTCTGAACAATGTCAAATGGATTTGATAGCGATGTCTCTGAACAATGTAAAATGGATTTGAGAGCGATGTCTCTGAACAATGTAAAATGGATTTGAGAGCGATGTCTCTGAACAATGTCAAATGGATTTGAGAGCGATGTCTCTGAACAATGTCAAATGGATTTGAGAGCGATGTCGTGTGGTTAAGAAACTATTGACATGTTTCATTAACATGTAAAAGCAGGCGTCGCAGTTTGAAGACGTTACCGCTCAACGGAGGGGAGCAACTTTTTACATTTCGAATCTAAAAAGAAAATACGACACTGAATTGCAAAAACAAGGCGTGTAACTTGTTCGCTATCGTCCGCGTATTCAGAATATGTCATTTCTATAATTATTGCATGTTCCGTTTAACAGGTATTAACGAGCAAATTCCGAATCTTTAATATTAAAGCTAACTAACGTTACATCACACTGGACTTTGGCAGTGTTGTCACACTGACTGCACTGCCCTATGTTGCCGTTGATATACGTGTTCATGTTGGGGAGATAGCGAGCAATACTGTTGTTGTCAAGATGAAGTTGTCTTCTATTGTAGTAACATTGATATTAACGGTGGGTGTTCCTTATTACATCTATACACCGTTACCTGCTGCCATCGAGGATCATTTGAAACTGATGCTGTTGGACGCCTTATTCCGTGCTATGCTGCAAGTGggTGACCTGTGCCAGTGTCTGGGTCTCAGTCACCACATCACAGTGATTCGGGGGTCCACATTGGGGCTGGGGTCCCCGGGGGAGATGGCGGGAGGGCAGGGAGGCGGGATGAGGGTGAGTGACGTGGACTTTGACAGAGTCCCGGTGCGCGTGTACGAACCCCCCGCCGCGGGGGGAGGAGACGGGGGTCTGAGGAGGGCTGTGATGTTCTACCATGGAGGAGGATGGGCCCTGGGGACCACCaAGATGGGGAGCTATGATGTCTTGTGTAGGCAGATGTCTGATGAGCTGAATGCAGTGGTTGTGTCTGTTGAgtaccgTCTGGCTCCAGAAGTGCATTTCCCTGTGCAGTATGAGGACTGTCTGGCTGCGGCCAAGCACTTCTTGGAGCCGGGCATTCTGGGAAAGTTGTCTGTGGATCCACAGCGCGTGGCCGTGTCAGGCGACAgcgctggaggaaacctggctgcAGCGGTCgcacagcagATCTCGGTAGATGACAGTGTGCGTGTGAAGTTCAGTGTTCAGGCGTTAATCTACCCAGTCCTCCAGGGTCTAGACCTCAACACTCCATCCTACCAACAGAACCACAACATGCCCATGCTACACCGCTCTATGatggccagGTTCTGGCTGCTCTACCTGGGGGTTgatacctctctccatcccctcctcttgtccccctccttcctccatcatccctccatccctccctccgtccgcTCCCATCTCAACTGGACCACCCTTCTGCCGGCCAAACACATTAAGCATTACAAGCCTGTTGGCATGGAGATGGGGTCACAGGAGGTCACAGGGCAGGAGGGTGATCTTCTCCCGGGGTTGCTGGATGTCCGAGCGGCGCCGCTGCTGGCGGAACAGGGGGTTCTGAGTAGAACGCCGCGAGCTTACATTCTAACGTGTGAGTACGATGTGCTCAGAGACGATGGGTTGATGTACACCAGGAGGCTACAAGACGCTGGCGTCGCGGTTTCCAGCCATCACTATGACGACGGTTTCCACGGCGCCTTGAGTTTTGCTCACTGGCCGTTTTTCTTCGATGTGGGGGAAAGAATGATCAGAGGATACATGGACTGGCTGCAGGAAaacctctagtgtgtgtgtgtgtgtgtgtctatgcagcTGCAAACCCAAAGCCATCTTGCAGTCAGAATTTCAGACCAATGTCCAGGTTAGACAAGCAGATGTTTTTAAGGCTTTTAAACTGGGTTCAACCTGATTGTTGACCTCGGTTAGAATGTCTCTCTTACTGGGTTAAACTGGATCAAACTGGGTTGGACTGGTGTTTTAAACTGTGTTAGAATGTAAGAATATAACACAGACACCATTCCCTGATTTTAGCTGTTTGCACTCTGGGGTGTGTGTGTCACAATACGTTTGGTTCCGTTAAACCCACACACACGTCATCCTATCCCAGCTCTGCTCAACTGACCTGAACAATACATATGCAGTATGTTATCTGTCTGTCAAACTAATACACTAAAATAAACTTCCATCTAAGCCAATCAATGCGCAGTGTTAGAATGTAGTAATCTGGGTAATCTGCTGACTCCATAAGAGTCCTATTTCTAGAATAGATTGGGTTAAATTATGCTATGTGCACAACTGGGTTACACATCAATGCAATCTATATAGAATTGTGACTAGATGGAAAAACAATGAGGACTTAAAAGGTCATACAACACGATCCCCTGGTGctgtaaaaacaataacaaaacttGAAAATGAAGTATGTTCTTTAGACAGGGTATTGGGTGAGGACTTTTCAACCCCCAACGCTGTGAGAGCTTGATTGTTTTCCACTGAACAGAATGATCTCAGGTGTCCCCAGTAACTGCTGCTGGGTGTCAGTACTTTATGTACAATTATAATTGTAATGGTTGAGAGATGTTTAACCCTCCAATAAATATTGATCAGTTTGA

Function

NR:

description
PREDICTED: neutral cholesterol ester hydrolase 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036952123.1 True 2736 mRNA 0.47 6 18231889 18237893

Neighbor

gene id symbol gene type direction distance location
LOC110495699 LOC106574468 coding downstream 465 18224782 ~ 18231424 (-)
LOC110495700 LOC106594337 coding downstream 64526 18160955 ~ 18167363 (-)
LOC118941107 NA coding downstream 177535 18051980 ~ 18054354 (-)
trnal-cag-26 NA coding downstream 190390 18041417 ~ 18041499 (-)
trnal-cag-25 NA coding downstream 191236 18040571 ~ 18040653 (-)
ghs-r ghsr coding upstream 207190 18445083 ~ 18447303 (-)
LOC110497072 LOC106574477 coding upstream 261933 18499826 ~ 18513863 (-)
LOC118941108 LOC106575244 coding upstream 357891 18595784 ~ 18603170 (-)
LOC110495729 LOC106574585 coding upstream 366704 18604597 ~ 18617046 (-)
LOC110497079 LOC106575437 coding upstream 391198 18629091 ~ 18643487 (-)
G1523073 LOC106575446 non-coding downstream 29301 18201251 ~ 18202588 (-)
G1523081 NA non-coding downstream 67924 18163214 ~ 18163965 (-)
G1523063 atr non-coding downstream 117707 18113471 ~ 18114182 (-)
G1523056 NA non-coding downstream 126877 18104619 ~ 18105012 (-)
G1523045 NA non-coding downstream 144135 18084524 ~ 18087754 (-)
G1523114 NA non-coding upstream 625 18238518 ~ 18238736 (-)
G1523115 NA non-coding upstream 1257 18239150 ~ 18239685 (-)
G1523116 NA non-coding upstream 2028 18239921 ~ 18240135 (-)
G1523122 NA non-coding upstream 14804 18252697 ~ 18253031 (-)
G1523102 NA non-coding upstream 15322 18253215 ~ 18258328 (-)
LOC110510546 LOC106575482 other downstream 486991 17719504 ~ 17815003 (-)
LOC118941106 LOC106575483 other downstream 529136 17685551 ~ 17702827 (-)
LOC110528763 LOC106575486 other downstream 561930 17640874 ~ 17671930 (-)
G1522794 NA other downstream 781711 17441659 ~ 17450178 (-)
G1523149 fndc3b other upstream 194200 18432093 ~ 18436052 (-)
G1523234 NA other upstream 303252 18541145 ~ 18541711 (-)
G1523241 NA other upstream 324013 18561906 ~ 18567247 (-)
G1524311 NA other upstream 511232 18749125 ~ 18749395 (-)

Expression


Co-expression Network